BLASTX nr result
ID: Coptis24_contig00002419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002419 (1072 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513438.1| conserved hypothetical protein [Ricinus comm... 162 2e-37 ref|XP_002299252.1| predicted protein [Populus trichocarpa] gi|1... 160 4e-37 emb|CAN83221.1| hypothetical protein VITISV_031365 [Vitis vinifera] 158 2e-36 ref|XP_002285600.1| PREDICTED: uncharacterized protein LOC100262... 158 2e-36 ref|XP_002278550.1| PREDICTED: uncharacterized protein LOC100248... 157 6e-36 >ref|XP_002513438.1| conserved hypothetical protein [Ricinus communis] gi|223547346|gb|EEF48841.1| conserved hypothetical protein [Ricinus communis] Length = 137 Score = 162 bits (409), Expect = 2e-37 Identities = 88/137 (64%), Positives = 98/137 (71%), Gaps = 5/137 (3%) Frame = -1 Query: 685 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXKADVEN 506 MGRGRGKGKKLTA +DDPGSG EE +PA KRRGRPQKPL + D EN Sbjct: 1 MGRGRGKGKKLTA-GNNDDPGSGEEEKIPAQKRRGRPQKPLKDDIDEEEVEKLEEEDGEN 59 Query: 505 VKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVIT-----DSIKTNGFRQNG 341 K+ +K+TK P ENGKKRKR++Q KE SDS+KEENGV T DS K+NGFR NG Sbjct: 60 GKACLTSKETKSPIAVENGKKRKRYSQSKEKSDSMKEENGVSTRSSTDDSTKSNGFRHNG 119 Query: 340 SRRKSKPRRAAEAGVEC 290 SRRKSKPRRAAEAGVEC Sbjct: 120 SRRKSKPRRAAEAGVEC 136 >ref|XP_002299252.1| predicted protein [Populus trichocarpa] gi|118481982|gb|ABK92922.1| unknown [Populus trichocarpa] gi|222846510|gb|EEE84057.1| predicted protein [Populus trichocarpa] Length = 137 Score = 160 bits (406), Expect = 4e-37 Identities = 87/137 (63%), Positives = 97/137 (70%), Gaps = 5/137 (3%) Frame = -1 Query: 685 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXKADVEN 506 MGRGRGKGKKLT V+ HDD GSG EE +PA KRRGRPQKPL +VEN Sbjct: 1 MGRGRGKGKKLT-VSNHDDTGSGEEEKIPAQKRRGRPQKPLKDDIDEEEVEKIEDEEVEN 59 Query: 505 VKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVIT-----DSIKTNGFRQNG 341 K+ +K+TK P AENGKKRKR++Q KE DSVKEENGV T DS K+NGFR N Sbjct: 60 GKTGITSKETKSPTAAENGKKRKRYSQAKEKPDSVKEENGVGTRSSTDDSTKSNGFRHNR 119 Query: 340 SRRKSKPRRAAEAGVEC 290 SRRK+KPRRAAEAGVEC Sbjct: 120 SRRKNKPRRAAEAGVEC 136 >emb|CAN83221.1| hypothetical protein VITISV_031365 [Vitis vinifera] Length = 256 Score = 158 bits (400), Expect = 2e-36 Identities = 86/139 (61%), Positives = 96/139 (69%), Gaps = 6/139 (4%) Frame = -1 Query: 688 IMGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPL--XXXXXXXXXXXXXKAD 515 IMGRGRGKGKK T + T DDPGSG +E +PAYKRRGRPQKP+ + D Sbjct: 117 IMGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEED 176 Query: 514 VENVKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVITDS----IKTNGFRQ 347 EN K +KD K AT ENG+KRKR Q KENSDSVKEENG T S +K+ GFRQ Sbjct: 177 GENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNNDLKSVGFRQ 236 Query: 346 NGSRRKSKPRRAAEAGVEC 290 NGSRRK+KPRRAAEAGVEC Sbjct: 237 NGSRRKNKPRRAAEAGVEC 255 >ref|XP_002285600.1| PREDICTED: uncharacterized protein LOC100262168 [Vitis vinifera] gi|147828374|emb|CAN73155.1| hypothetical protein VITISV_040683 [Vitis vinifera] Length = 137 Score = 158 bits (400), Expect = 2e-36 Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 5/137 (3%) Frame = -1 Query: 685 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXKADVEN 506 MGRGRGKGKKLT VT H+DPGSG EE +PA KRRGRPQKPL D EN Sbjct: 1 MGRGRGKGKKLT-VTNHEDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEEVEKIEDEDSEN 59 Query: 505 VKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVIT-----DSIKTNGFRQNG 341 K +K+ K A AENGKKRKR++Q KE DSVKEENG+ T DS K+NGFR N Sbjct: 60 AKIGISSKEMKSSAAAENGKKRKRYSQAKEKPDSVKEENGIGTRSSTDDSTKSNGFRNNR 119 Query: 340 SRRKSKPRRAAEAGVEC 290 +RRKSKPRRAAEAGVEC Sbjct: 120 NRRKSKPRRAAEAGVEC 136 >ref|XP_002278550.1| PREDICTED: uncharacterized protein LOC100248625 [Vitis vinifera] Length = 139 Score = 157 bits (396), Expect = 6e-36 Identities = 85/138 (61%), Positives = 95/138 (68%), Gaps = 6/138 (4%) Frame = -1 Query: 685 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPL--XXXXXXXXXXXXXKADV 512 MGRGRGKGKK T + T DDPGSG +E +PAYKRRGRPQKP+ + D Sbjct: 1 MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 60 Query: 511 ENVKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVITDS----IKTNGFRQN 344 EN K +KD K AT ENG+KRKR Q KENSDSVKEENG T S +K+ GFRQN Sbjct: 61 ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNNDLKSVGFRQN 120 Query: 343 GSRRKSKPRRAAEAGVEC 290 GSRRK+KPRRAAEAGVEC Sbjct: 121 GSRRKNKPRRAAEAGVEC 138