BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002393
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   168   5e-40
emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]   168   5e-40
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   165   3e-39
ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arab...   164   5e-39
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39

>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/97 (81%), Positives = 87/97 (89%)
 Frame = +2

Query: 26  MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 205
           MSGRFSRTIYVGNLP DIRE EIED+FYKYG I+D+ELK PPRPP +CFVEFE++RDA+D
Sbjct: 1   MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60

Query: 206 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRRGGYG 316
           AIRGRDGY FD  RLRVELAHGGR Q SSSDRRGG+G
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHG 97


>emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
          Length = 267

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/97 (81%), Positives = 87/97 (89%)
 Frame = +2

Query: 26  MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 205
           MSGRFSRTIYVGNLP DIRE EIED+FYKYG I+D+ELK PPRPP +CFVEFE++RDA+D
Sbjct: 1   MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60

Query: 206 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRRGGYG 316
           AIRGRDGY FD  RLRVELAHGGR Q SSSDRRGG+G
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHG 97


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/97 (82%), Positives = 86/97 (88%)
 Frame = +2

Query: 26  MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 205
           MSGRFSRTIYVGNLP DIRE E+ED+FYKYG I+DIELK PPRPP +CFVEFE+ RDA+D
Sbjct: 1   MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60

Query: 206 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRRGGYG 316
           AIRGRDGY FD  RLRVELAHGGR Q SSSDRRGGYG
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQ-SSSDRRGGYG 96


>ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
           lyrata] gi|297321802|gb|EFH52223.1| hypothetical protein
           ARALYDRAFT_906222 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/97 (82%), Positives = 86/97 (88%)
 Frame = +2

Query: 26  MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 205
           MSGRFSR+IYVGNLP DIRE EIED+FYKYG IVDIELK PPRPP +CFVEFE +RDA+D
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 206 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRRGGYG 316
           AI+GRDGY FD  RLRVELAHGGR Q SSSDRRGGYG
Sbjct: 61  AIKGRDGYNFDGCRLRVELAHGGRGQ-SSSDRRGGYG 96


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/97 (81%), Positives = 86/97 (88%)
 Frame = +2

Query: 26  MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 205
           MSGRFSRTIYVGNLP DIRE EIED+FYKYG I+D+ELK PPRPP +CFVEFE+ARDA+D
Sbjct: 1   MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 206 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRRGGYG 316
           AIRGRDGY FD  RLRVELAHGGR   SS+DRRGGYG
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGP-SSNDRRGGYG 96