BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002375
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...   192   9e-47
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...   192   1e-46
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   191   2e-46
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   191   3e-46
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   191   3e-46

>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score =  192 bits (489), Expect = 9e-47
 Identities = 112/339 (33%), Positives = 179/339 (52%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1025 TEAGNLKNILNIYCEASGQRINYDKSSVYCSNNVHDKHKKLIKRFLRVRPFHPNEKYLGV 846
            T +  +KN+L++Y +  GQ IN DKS++  S N     K+ +   L ++    NEKYLG+
Sbjct: 150  TVSYRIKNVLSLYEDCLGQTINKDKSTIMFSKNSTTVEKENVMAGLGIQSEARNEKYLGL 209

Query: 845  PIILSSKKCDDFDYLVDIVHTKIKG*RAKVLSQAGRAVLIKAVAQDTPLYTMLTYAILAT 666
            PI +   +   F YL D V  +++G + ++LS+AG+ +LIK+V Q  P Y M  + +  T
Sbjct: 210  PIYMGRSRSQTFSYLKDRVWKRLQGWKERLLSKAGKEILIKSVVQSIPTYAMSCFDLTKT 269

Query: 665  TCAKIDKVCRDFFWNGTDEKSNLHTNRWDKLCSAKAMGGLGFRKTGDMNKALLAKHGWRL 486
             C ++  +   F+W   + ++ +H   W+ LC  K  GG+G+R     N A+LA+ GWRL
Sbjct: 270  LCNELGSLVCRFWWAQQENENKVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRL 329

Query: 485  YHDPDSLWTRSFKSIYQKWWPPDGARQYPRNSSYFWKGIAKSMDLIDKGSIWSIGDGKIV 306
              +P SL  +  ++ Y         R+ P   SY W+ I + +  + KG IW +GDG  +
Sbjct: 330  IMEPMSLCAQVLRAKYFPTGDLMAVREKP-GISYSWRSIVRGIQALKKGLIWRVGDGTNI 388

Query: 305  QVFHDPWIT--IQGKPATLSDYAYTRPNNHLMKVAELRHANGFDWNMELVNKLFPNPLAQ 132
             ++HDPW+   I  +P T       R    + KV +L       W+ EL+  LF     +
Sbjct: 389  DIWHDPWLPSGITRRPIT------PRGRTVVNKVTDLIDPTIGKWDKELIEGLFWEEDVK 442

Query: 131  AINDIIIRPGNRKGKLT*FNSKKGLFSVKEAYRCLKDDQ 15
             I  I IR G   G    F++ +G+FSVK AY  L+D++
Sbjct: 443  QILTIPIRAGVEDGLAWHFDN-RGIFSVKSAYHVLEDER 480


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score =  192 bits (487), Expect = 1e-46
 Identities = 111/331 (33%), Positives = 177/331 (53%), Gaps = 2/331 (0%)
 Frame = -1

Query: 1019 AGNLKNILNIYCEASGQRINYDKSSVYCSNNVHDKHKKLIKRFLRVRPFHPNEKYLGVPI 840
            A  +K I+  Y   SGQ +N DKS V  S+N+ ++ KK+    L +     N++YLG+P+
Sbjct: 217  ANEMKQIILDYERCSGQIVNRDKSVVMFSSNMDEEEKKVFSHTLGINCIAHNDRYLGLPV 276

Query: 839  ILSSKKCDDFDYLVDIVHTKIKG*RAKVLSQAGRAVLIKAVAQDTPLYTMLTYAILATTC 660
             +   K   F+YL + +   I+G + K LS+AG+ +LIKAVAQ  P Y M  + +  + C
Sbjct: 277  FIGRSKAKTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLC 336

Query: 659  AKIDKVCRDFFWNGTDEKSNLHTNRWDKLCSAKAMGGLGFRKTGDMNKALLAKHGWRLYH 480
             ++  +   F+W   D    +H    DK+   K+ GGLGFR     N A+LA+ GWRL  
Sbjct: 337  DELTSMILRFWWAQHDNDKKIHWLGKDKIMKPKSQGGLGFRDLHSFNIAMLARQGWRLIQ 396

Query: 479  DPDSLWTRSFKSIYQKWWPPDGA--RQYPRNSSYFWKGIAKSMDLIDKGSIWSIGDGKIV 306
            +PDSL +R  K+   K++P       Q  +  SY W+ I K + L+ KG IW +G+G+ +
Sbjct: 397  NPDSLCSRLLKA---KYFPNCNVLDAQSRKQMSYSWRSILKGIQLLRKGVIWRVGNGEHI 453

Query: 305  QVFHDPWITIQGKPATLSDYAYTRPNNHLMKVAELRHANGFDWNMELVNKLFPNPLAQAI 126
             ++ DPW+     P  +      R  + + +V EL       W++EL+ ++F    A+ I
Sbjct: 454  NIWSDPWL-----PRDMRFVTTRRGASLITRVCELIDPTTGQWDIELIQQIFNENDAKII 508

Query: 125  NDIIIRPGNRKGKLT*FNSKKGLFSVKEAYR 33
              I +R G ++  +      KG+FSVK AY+
Sbjct: 509  TRIPLREG-QEDFIAWQPDTKGIFSVKSAYK 538


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  191 bits (486), Expect = 2e-46
 Identities = 119/339 (35%), Positives = 178/339 (52%), Gaps = 5/339 (1%)
 Frame = -1

Query: 1022 EAGNLKNILNIYCEASGQRINYDKSSVYCSNNVHDKHKKLIKRFLRVRPFHPNEKYLGVP 843
            EA  L+ IL IY E SGQ IN DKS+V  S N     K+ +   L ++    NE+YLG+P
Sbjct: 951  EAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLP 1010

Query: 842  IILSSKKCDDFDYLVDIVHTKIKG*RAKVLSQAGRAVLIKAVAQDTPLYTMLTYAILATT 663
            + +   +   F YL + +  +I+G + K+LS+AG+ +LIKAVAQ  P + M  + +    
Sbjct: 1011 VFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDL 1070

Query: 662  CAKIDKVCRDFFWNGTDEKSNLHTNRWDKLCSAKAMGGLGFRKTGDMNKALLAKHGWRLY 483
            C +I K+   ++W+  ++ + +H   W+KL   K MGGLGFR     N A+LAK GWRL 
Sbjct: 1071 CDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLI 1130

Query: 482  HDPDSLWTRSFKSIYQKWWPPDGARQYPR---NSSYFWKGIAKSMDLIDKGSIWSIGDGK 312
             DPDSL +R  ++ Y     P G    P+   N SY W+ I K + ++  G IW +GDG 
Sbjct: 1131 QDPDSLCSRVLRAKYF----PLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGS 1186

Query: 311  IVQVFHDPWIT--IQGKPATLSDYAYTRPNNHLMKVAELRHANGFDWNMELVNKLFPNPL 138
             + ++ DPWI      KP T       R  N + KV EL       W+ +L+++ F    
Sbjct: 1187 KINIWADPWIPRGWSRKPMT------PRGANLVTKVEELIDPYTGTWDEDLLSQTFWEED 1240

Query: 137  AQAINDIIIRPGNRKGKLT*FNSKKGLFSVKEAYRCLKD 21
              AI  I +     +  L      +G F+VK AY+  ++
Sbjct: 1241 VAAIKSIPVHV-EMEDVLAWHFDARGCFTVKSAYKVQRE 1278


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  191 bits (484), Expect = 3e-46
 Identities = 120/339 (35%), Positives = 177/339 (52%), Gaps = 5/339 (1%)
 Frame = -1

Query: 1022 EAGNLKNILNIYCEASGQRINYDKSSVYCSNNVHDKHKKLIKRFLRVRPFHPNEKYLGVP 843
            EA  L+ IL IY E SGQ IN DKS+V  S N     K  +   L ++    NEKYLG+P
Sbjct: 896  EAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLP 955

Query: 842  IILSSKKCDDFDYLVDIVHTKIKG*RAKVLSQAGRAVLIKAVAQDTPLYTMLTYAILATT 663
            + +   +   F YL + +  +I+G + K+LS+AG+ +LIKAVAQ  P + M  + +    
Sbjct: 956  VFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDL 1015

Query: 662  CAKIDKVCRDFFWNGTDEKSNLHTNRWDKLCSAKAMGGLGFRKTGDMNKALLAKHGWRLY 483
            C +I K+   ++W+  ++ + +H   W+KL   K MGGLGFR     N A+LAK GWRL 
Sbjct: 1016 CDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLI 1075

Query: 482  HDPDSLWTRSFKSIYQKWWPPDGARQYPR---NSSYFWKGIAKSMDLIDKGSIWSIGDGK 312
             DPDSL +R  ++ Y     P G    P+   N SY W+ I K + ++  G IW +GDG 
Sbjct: 1076 QDPDSLCSRVLRAKYF----PLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGS 1131

Query: 311  IVQVFHDPWIT--IQGKPATLSDYAYTRPNNHLMKVAELRHANGFDWNMELVNKLFPNPL 138
             + ++ DPWI      KP T       R  N + KV EL       W+ +L+++ F    
Sbjct: 1132 KINIWADPWIPRGWSRKPMT------PRGANLVTKVEELIDPYTGTWDEDLLSQTFWEED 1185

Query: 137  AQAINDIIIRPGNRKGKLT*FNSKKGLFSVKEAYRCLKD 21
              AI  I +     +  L      +G F+VK AY+  ++
Sbjct: 1186 VAAIKSIPVHV-EMEDVLAWHFDARGCFTVKSAYKVQRE 1223


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  191 bits (484), Expect = 3e-46
 Identities = 120/339 (35%), Positives = 177/339 (52%), Gaps = 5/339 (1%)
 Frame = -1

Query: 1022 EAGNLKNILNIYCEASGQRINYDKSSVYCSNNVHDKHKKLIKRFLRVRPFHPNEKYLGVP 843
            EA  L+ IL IY E SGQ IN DKS+V  S N     K  +   L ++    NEKYLG+P
Sbjct: 892  EAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLP 951

Query: 842  IILSSKKCDDFDYLVDIVHTKIKG*RAKVLSQAGRAVLIKAVAQDTPLYTMLTYAILATT 663
            + +   +   F YL + +  +I+G + K+LS+AG+ +LIKAVAQ  P + M  + +    
Sbjct: 952  VFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDL 1011

Query: 662  CAKIDKVCRDFFWNGTDEKSNLHTNRWDKLCSAKAMGGLGFRKTGDMNKALLAKHGWRLY 483
            C +I K+   ++W+  ++ + +H   W+KL   K MGGLGFR     N A+LAK GWRL 
Sbjct: 1012 CDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLI 1071

Query: 482  HDPDSLWTRSFKSIYQKWWPPDGARQYPR---NSSYFWKGIAKSMDLIDKGSIWSIGDGK 312
             DPDSL +R  ++ Y     P G    P+   N SY W+ I K + ++  G IW +GDG 
Sbjct: 1072 QDPDSLCSRVLRAKYF----PLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGS 1127

Query: 311  IVQVFHDPWIT--IQGKPATLSDYAYTRPNNHLMKVAELRHANGFDWNMELVNKLFPNPL 138
             + ++ DPWI      KP T       R  N + KV EL       W+ +L+++ F    
Sbjct: 1128 KINIWADPWIPRGWSRKPMT------PRGANLVTKVEELIDPYTGTWDEDLLSQTFWEED 1181

Query: 137  AQAINDIIIRPGNRKGKLT*FNSKKGLFSVKEAYRCLKD 21
              AI  I +     +  L      +G F+VK AY+  ++
Sbjct: 1182 VAAIKSIPVHV-EMEDVLAWHFDARGCFTVKSAYKVQRE 1219