BLASTX nr result

ID: Coptis24_contig00002368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002368
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    91   2e-16
ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein...    80   5e-13
ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein...    80   5e-13
emb|CBI22882.3| unnamed protein product [Vitis vinifera]               76   6e-12

>ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|222865083|gb|EEF02214.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 69/200 (34%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
 Frame = +3

Query: 120 GYAIQYPFNYEDRNFRRRWGEGYPGLMMKCLDNRPFINISNHLYLVQEIRYDVQMVTIVD 299
           G  I YPF ++ + F      GYPG  + C D  P I +SN LY +  I +  + +T+  
Sbjct: 42  GITISYPFWHQSQQFEHC---GYPGFNISCSDQNPMIYLSNDLYPITNINHSSKSLTLHH 98

Query: 300 ADIERQDCPQPRRNFSLSDSTPYLRSNYLANAI--FFYNCTNNNHNYSVAQLLPCLDNYN 473
             I R DCP+   +    +STP L ++ L N +  FFYNCT    +      + CL    
Sbjct: 99  TKIRRADCPKAPHDTITVNSTPSLFNSTLGNKMLHFFYNCTLYPPS---LPHIACL---- 151

Query: 474 NSNTNERSYAFYSYSIPKGFDGYRTCSESVVAPY--------NFAENFSRDLKLGFDLFW 629
                ++SY F   + P+ FD +R C ESVV+          +  + F R L+ GF L W
Sbjct: 152 -QYGIKQSYVFLEGATPE-FDWHRYC-ESVVSALVSDEAVSGDLVQGFGRALQGGFKLTW 208

Query: 630 -STPTECQDCEKSGGRCLYN 686
                ECQ CE SGG C YN
Sbjct: 209 KQLDGECQSCEASGGFCGYN 228


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 65/212 (30%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
 Frame = +3

Query: 111 CPYGYAIQYPFNYEDRNFRRRWGEGYPGLMMKCL-DNRPFINISNHLYLVQEIRYDVQMV 287
           C  G  I+YPF Y++ +   ++  GYP L + C  D+ P + + N  Y V+ I Y    +
Sbjct: 39  CGNGVTIKYPFWYKNNSTPDQYC-GYPKLGLSCSNDDEPVLGLPNDSYYVKNINYTDSTI 97

Query: 288 TIVDADIERQDCPQPRRNFSLSDSTPYLRSNYLANAIFFYNCTNNNHNYSVAQL-LPCLD 464
           T+VD D+  Q CP+ R N +L D+ P   ++   N  F++NCT+N  + + +   + CL 
Sbjct: 98  TLVDIDVVGQTCPRARHNLTL-DNLPLNYTDLNLNLSFYFNCTSNPSSSNTSLFGIECL- 155

Query: 465 NYNNSNTNERSYAFYSYSIPKGFDGYRTCSESVVAP--------YNFAENFSRDLKLGFD 620
                    +SY   +       D    C + VVA          N    F   +  GF 
Sbjct: 156 ----GVGTTQSYVVMTED--DEVDWIGKCMDHVVATVMRTEITGINLITGFGAAMNQGFV 209

Query: 621 LFWSTPTECQDCEKSGGRCLYNTTTSVPRCVC 716
           L W T  EC  CE SGG C YN       C C
Sbjct: 210 LDWRTVKECGACEVSGGFCGYNEIDEQFLCFC 241


>ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 645

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
 Frame = +3

Query: 183 GYPGLMMKCLDNRPFINISNHLYLVQEIRYDVQMVTIVDADIERQDCPQPRRNFSLSDST 362
           G+P   + C D  P I ISN  Y++++I Y      + +  +   +C  P  NFSL   T
Sbjct: 57  GFPSFRISCKDENPIIRISNEDYIIRDISYKNHSFLLTNDAVYDSNCLTPLHNFSL-HRT 115

Query: 363 PYLRSNYLANAIFFYNCTNNNHNYSVAQLLPCLDNYNNSNTNERSY-AFYSYSIPKGFDG 539
           P+  S+      FFYNCT+   NYS    + C     +S +   S+ AF+   +      
Sbjct: 116 PFSYSSDHIGFFFFYNCTSLPPNYSYP--IDC-----SSTSKLHSFGAFHEGYLEFMNFS 168

Query: 540 YRTCSESVVAPYNF-----------AENFSRDLKLGFDLFWSTPTECQDCEKSGGRC 677
             +C  SV  P +F            +N++  LK+GF L WS  + C  C+ SGGRC
Sbjct: 169 SNSCQSSVEVPMDFNNEDDDFTGLLRKNYTDLLKMGFSLNWSGQS-CSTCDTSGGRC 224


>ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 652

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
 Frame = +3

Query: 183 GYPGLMMKCLDNRPFINISNHLYLVQEIRYDVQMVTIVDADIERQDCPQPRRNFSLSDST 362
           G+P   + C D  P I ISN  Y++++I Y      + +  +   +C  P  NFSL   T
Sbjct: 57  GFPSFRISCKDENPIIRISNEDYIIRDISYKNHSFLLTNDAVYDSNCLTPLHNFSL-HRT 115

Query: 363 PYLRSNYLANAIFFYNCTNNNHNYSVAQLLPCLDNYNNSNTNERSY-AFYSYSIPKGFDG 539
           P+  S+      FFYNCT+   NYS    + C     +S +   S+ AF+   +      
Sbjct: 116 PFSYSSDHIGFFFFYNCTSLPPNYSYP--IDC-----SSTSKLHSFGAFHEGYLEFMNFS 168

Query: 540 YRTCSESVVAPYNF-----------AENFSRDLKLGFDLFWSTPTECQDCEKSGGRC 677
             +C  SV  P +F            +N++  LK+GF L WS  + C  C+ SGGRC
Sbjct: 169 SNSCQSSVEVPMDFNNEDDDFTGLLRKNYTDLLKMGFSLNWSGQS-CSTCDTSGGRC 224


>emb|CBI22882.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
 Frame = +3

Query: 120 GYAIQYPFNYEDRNFRRRWGEGYPGLMMKCLDNR--PFINISNHLYLVQEIRYDVQMVTI 293
           G   +YPF ++D+        GYPG  + C  +   P + +S   Y + +I Y    +T+
Sbjct: 40  GGVFRYPFWHQDQPSGYC---GYPGFGISCGGDGSGPVLRLSGDAYSIMKINYSENTLTL 96

Query: 294 VDADIERQDCPQPRRNFSLSDSTPY---LRSNYLANAIFFYNCTNNNHNYSVAQLLPCLD 464
              DI    CP+     +L +S+ +    R+N L    FFYNCT           LP ++
Sbjct: 97  RYVDINNGSCPRAPHGVTLDNSSAFSYTARNNMLR---FFYNCT------LYPPSLPSME 147

Query: 465 NYNNSNTNERSYAFYSYSIPKGFDGYRTCSESVVAPY-------NFAENFSRDLKLGFDL 623
              +    +RSY F   ++P+ FD    C  +   P        +  ++F R ++ GF+L
Sbjct: 148 CLRHGT--KRSYVFIVGAVPE-FDWSGYCETTATVPVIEKSVGGDLVDDFGRGIREGFEL 204

Query: 624 FWSTPTECQDCEKSGGRCLY 683
            W +   C+ CE SGG C Y
Sbjct: 205 TWRSDGGCRSCEDSGGFCGY 224


Top