BLASTX nr result
ID: Coptis24_contig00002362
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002362
(2470 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245... 140 6e-53
emb|CBI20761.3| unnamed protein product [Vitis vinifera] 140 6e-53
ref|XP_003549202.1| PREDICTED: uncharacterized protein LOC100803... 139 2e-50
ref|XP_002515338.1| ring finger protein, putative [Ricinus commu... 129 1e-49
ref|XP_003545543.1| PREDICTED: uncharacterized protein LOC100812... 132 3e-48
>ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245643 [Vitis vinifera]
Length = 550
Score = 140 bits (352), Expect(2) = 6e-53
Identities = 80/131 (61%), Positives = 84/131 (64%)
Frame = +2
Query: 1724 SIERDGYQHYNRAGIAEVLLALERIEQXXXXXXXXXXXXXXXXXXXXXXXXLERIEQDEE 1903
S+ RD + YN GIAEVLLALERIE QDEE
Sbjct: 387 SMNRDSLRRYNMDGIAEVLLALERIE------------------------------QDEE 416
Query: 1904 LTYEQLLVLETNLFLSGLGFRDQHRDMRLDIDNMSYEELLALGEKMGTVSTGLTEEKLSN 2083
LTYEQLLVLETNLFL GL F DQHR+MRLDIDNMSYEELLAL EKMGTVST LTEE LS
Sbjct: 417 LTYEQLLVLETNLFLGGLSFHDQHREMRLDIDNMSYEELLALEEKMGTVSTALTEEALSK 476
Query: 2084 CLKRSFYMPAP 2116
CL+RS Y P
Sbjct: 477 CLERSIYHTLP 487
Score = 96.7 bits (239), Expect(2) = 6e-53
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +1
Query: 2227 GDDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 2379
GDD KCS+CQEEY GDE+G L+C+H YH+ CI+QWLRLKNWCP+CKA AA
Sbjct: 499 GDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCKASAA 549
Score = 119 bits (298), Expect = 4e-24
Identities = 115/372 (30%), Positives = 176/372 (47%), Gaps = 12/372 (3%)
Frame = +3
Query: 315 MDDYSRKRASGGFGIVGRGSALG----FRDASNHDDRTVS-CNRLVCSNRHNFMKSSQVG 479
MD+YS KRA + +GS L RD +N+ DR CNRL C R N MK +Q+G
Sbjct: 1 MDEYSGKRAINELVVSRKGSGLRPGVILRDTANNRDRNAQFCNRLGCRGRLNSMKGTQLG 60
Query: 480 NSDRDKY---SSSSCTSPRSIVGSSSRAYSAVTNHKKDSLYSQNPSSHKAMLSTEANNIH 650
+ ++ K SS + +S + I+GSSS +V K + S+H S+E +++
Sbjct: 61 SLEKPKSSRPSSFTSSSGKEIIGSSSSTGPSV--RKSLQTPRKKLSAHLETDSSETSSVP 118
Query: 651 LENLSSEPSSSTARVAKG-LPAAEDTESSVLDGSVNASEVENYNLTLHSRTQKQIYRQSG 827
E+ E ++ +G P A+DTESS + EV + ++ ++R ++ +++SG
Sbjct: 119 DESEVLELIPPPGKIQRGHHPKADDTESS----EITPMEVGSSSIASNTRPRRNFHQKSG 174
Query: 828 QGHQEVSVGSSSLKSFVPKKTGQATKTTSHGQSFYAXXXXXXTPQSNRYGLRNLGCXXXX 1007
+Q +GSS + K GQ + HG + ++RYGLRNL C
Sbjct: 175 FTNQATLMGSS--VALASKTAGQVAR---HGAN------------ASRYGLRNLRCNSIS 217
Query: 1008 XXXXXXXXXXXXQNGRAEMVKRRNSTGE-CSSPKGKNVSASSSAGNFGSRKNSVINHSLS 1184
+ ++ K+R S E SS +GK SS +G +NS+ ++ +S
Sbjct: 218 DAMPSCSSSESNLTRKKDIGKKRLSEIESSSSARGKKSGGPSS--EYG--RNSISSYGVS 273
Query: 1185 LXXXXXXXXXXXXXXYWLPSR-NGVTSVRTRSTIN-EDSRSRVSEHGNYNNLSRTEPPVV 1358
+ W PSR NGV SVRTR +IN SR S G NNL TEP +
Sbjct: 274 ISDSRRSRN-------WTPSRDNGVASVRTRRSINGNTSRPSSSNQGIRNNLLPTEPSIT 326
Query: 1359 TPILLQNDMSDG 1394
P + Q ++S G
Sbjct: 327 IPQMPQPEISIG 338
>emb|CBI20761.3| unnamed protein product [Vitis vinifera]
Length = 403
Score = 140 bits (352), Expect(2) = 6e-53
Identities = 80/131 (61%), Positives = 84/131 (64%)
Frame = +2
Query: 1724 SIERDGYQHYNRAGIAEVLLALERIEQXXXXXXXXXXXXXXXXXXXXXXXXLERIEQDEE 1903
S+ RD + YN GIAEVLLALERIE QDEE
Sbjct: 240 SMNRDSLRRYNMDGIAEVLLALERIE------------------------------QDEE 269
Query: 1904 LTYEQLLVLETNLFLSGLGFRDQHRDMRLDIDNMSYEELLALGEKMGTVSTGLTEEKLSN 2083
LTYEQLLVLETNLFL GL F DQHR+MRLDIDNMSYEELLAL EKMGTVST LTEE LS
Sbjct: 270 LTYEQLLVLETNLFLGGLSFHDQHREMRLDIDNMSYEELLALEEKMGTVSTALTEEALSK 329
Query: 2084 CLKRSFYMPAP 2116
CL+RS Y P
Sbjct: 330 CLERSIYHTLP 340
Score = 96.7 bits (239), Expect(2) = 6e-53
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +1
Query: 2227 GDDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 2379
GDD KCS+CQEEY GDE+G L+C+H YH+ CI+QWLRLKNWCP+CKA AA
Sbjct: 352 GDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCKASAA 402
Score = 62.0 bits (149), Expect = 7e-07
Identities = 69/247 (27%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Frame = +3
Query: 663 SSEPSSSTARVAKGLPAAEDTESSVLDGSVNASEVENYNLTLHSRTQKQIYRQSGQGHQE 842
SS PSS T+ K + + ES VL+ +++ +GH
Sbjct: 14 SSRPSSFTSSSGKEIIGSSSNESEVLELIPPPGKIQ-------------------RGHHP 54
Query: 843 VSVGSSSLKSFVPKKTGQATKTTSHGQSFYAXXXXXXTPQSNRYGLRNLGCXXXXXXXXX 1022
+ + S P + G +T+ HG + ++RYGLRNL C
Sbjct: 55 KADDTES-SEITPMEVGSSTR---HGAN------------ASRYGLRNLRCNSISDAMPS 98
Query: 1023 XXXXXXXQNGRAEMVKRRNSTGECSSP-KGKNVSASSSAGNFGSRKNSVINHSLSLXXXX 1199
+ ++ K+R S E SS +GK SS +G +NS+ ++ +S+
Sbjct: 99 CSSSESNLTRKKDIGKKRLSEIESSSSARGKKSGGPSS--EYG--RNSISSYGVSISDSR 154
Query: 1200 XXXXXXXXXXYWLPSR-NGVTSVRTRSTINED-SRSRVSEHGNYNNLSRTEPPVVTPILL 1373
W PSR NGV SVRTR +IN + SR S G NNL TEP + P +
Sbjct: 155 RSRN-------WTPSRDNGVASVRTRRSINGNTSRPSSSNQGIRNNLLPTEPSITIPQMP 207
Query: 1374 QNDMSDG 1394
Q ++S G
Sbjct: 208 QPEISIG 214
>ref|XP_003549202.1| PREDICTED: uncharacterized protein LOC100803211 [Glycine max]
Length = 532
Score = 139 bits (349), Expect(2) = 2e-50
Identities = 82/154 (53%), Positives = 92/154 (59%), Gaps = 13/154 (8%)
Frame = +2
Query: 1694 GGSSQQLNGLS-------------IERDGYQHYNRAGIAEVLLALERIEQXXXXXXXXXX 1834
G SS+QL+G+ I RD ++HYN GIAEVLLALERIE
Sbjct: 339 GNSSEQLSGVMPASPAEDDNTHSLINRDSFRHYNMGGIAEVLLALERIE----------- 387
Query: 1835 XXXXXXXXXXXXXXLERIEQDEELTYEQLLVLETNLFLSGLGFRDQHRDMRLDIDNMSYE 2014
QD ELT+EQ+L+LE NLFLSGL F D HRDMRLDIDNMSYE
Sbjct: 388 -------------------QDAELTHEQILLLEANLFLSGLNFYDHHRDMRLDIDNMSYE 428
Query: 2015 ELLALGEKMGTVSTGLTEEKLSNCLKRSFYMPAP 2116
ELLAL E+MGTVST L EE L+ CLKRS Y AP
Sbjct: 429 ELLALEERMGTVSTALPEEALAECLKRSKYQSAP 462
Score = 89.7 bits (221), Expect(2) = 2e-50
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = +1
Query: 2230 DDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 2379
DD KC +CQEEY GDE+G+L+C+H +H+VCI +W+RLKNWCP+CK AA
Sbjct: 475 DDIKCCICQEEYVVGDEVGDLQCEHRFHVVCIQEWMRLKNWCPVCKVSAA 524
Score = 89.4 bits (220), Expect = 4e-15
Identities = 104/363 (28%), Positives = 153/363 (42%), Gaps = 12/363 (3%)
Frame = +3
Query: 315 MDDYSRKRASGGFGIVGRGSALGFRDASNHDDRTVS-CNRLVCSNRHNFMKSSQVGNSDR 491
MD+YSRKR G +G FRD +N DR C+RL CS+R N K + V +S++
Sbjct: 1 MDEYSRKRGVDGMVFPRKGMGHVFRDTANTRDRNGQICSRLGCSSRANLPKVAHVRSSEK 60
Query: 492 DKY---SSSSCTSPRSIVGSSSR--AYSAVTNHKKDSLYSQNPSSHKAMLSTEANNIHLE 656
K S S +S + +GSSSR +Y A + S +H S+E +++
Sbjct: 61 GKSLRPSFQSSSSSKDAIGSSSRTTSYPAKRLIEPRKTLSSQFEAH----SSETSSVQDG 116
Query: 657 NLSSEPSSSTARVAKG-LPAAEDTESSVLDGSVNASEVENYNLTLHSRTQKQIYRQSGQG 833
S P T + +G L E TESS NA +E + + S T+ Q ++G
Sbjct: 117 PEFSVPIPPTEEIRRGPLVEGESTESS------NAILMEVGSSSAVSNTRSQ---RAGLR 167
Query: 834 HQEVSVGSSSLKSFVPKKTGQATKTTSHGQSFYAXXXXXXTPQSNRYGLRNLGCXXXXXX 1013
QE+ K TG + S+RYGLRNL C
Sbjct: 168 AQEI------------KSTGAVRRAV-----------------SSRYGLRNLKCNSISDV 198
Query: 1014 XXXXXXXXXXQ-NGRAEMVKRRN-STGECSSPKGKNVSASSSAG-NFGSRKNSVINHSLS 1184
N R + +K+ N G S+ +GKN++ SS G N GSR I+ S
Sbjct: 199 VPAGCSPLDSSLNRRKDTIKKGNCEGGNSSTVRGKNITGSSLEGRNSGSRNGISISDSRR 258
Query: 1185 LXXXXXXXXXXXXXXYWLPSR--NGVTSVRTRSTINEDSRSRVSEHGNYNNLSRTEPPVV 1358
+PS V SVRT+ +I+ +R R GN N ++ ++ P+
Sbjct: 259 SRN--------------VPSHRSTSVASVRTQRSISGQARGRFCSQGNENPVASSDSPLN 304
Query: 1359 TPI 1367
P+
Sbjct: 305 IPL 307
>ref|XP_002515338.1| ring finger protein, putative [Ricinus communis]
gi|223545282|gb|EEF46787.1| ring finger protein, putative
[Ricinus communis]
Length = 554
Score = 129 bits (324), Expect(2) = 1e-49
Identities = 72/130 (55%), Positives = 83/130 (63%)
Frame = +2
Query: 1724 SIERDGYQHYNRAGIAEVLLALERIEQXXXXXXXXXXXXXXXXXXXXXXXXLERIEQDEE 1903
++ R+ ++ YN GIAEVLLALERIE DEE
Sbjct: 380 AVNRESFRRYNMDGIAEVLLALERIEH------------------------------DEE 409
Query: 1904 LTYEQLLVLETNLFLSGLGFRDQHRDMRLDIDNMSYEELLALGEKMGTVSTGLTEEKLSN 2083
L+YEQLLVLET++FL+GL F DQHRDMRLDIDNMSYEELLAL E+MG VST LTEE LS
Sbjct: 410 LSYEQLLVLETSMFLNGLNFYDQHRDMRLDIDNMSYEELLALEERMGNVSTALTEEALSE 469
Query: 2084 CLKRSFYMPA 2113
CLK S + A
Sbjct: 470 CLKTSIFQSA 479
Score = 96.7 bits (239), Expect(2) = 1e-49
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +1
Query: 2230 DDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 2379
DD KCS+CQEEY GDEMG L+C+H YH+ C+ QWLRLKNWCPICKA AA
Sbjct: 493 DDVKCSICQEEYTVGDEMGRLQCEHRYHVACVQQWLRLKNWCPICKASAA 542
Score = 111 bits (278), Expect = 8e-22
Identities = 108/357 (30%), Positives = 157/357 (43%), Gaps = 9/357 (2%)
Frame = +3
Query: 315 MDDYSRKRASGGFGIVGRGSALGFRDASNHDDRTVS-CNRLVCSNRHNFMKSSQVGNSDR 491
MD+YS K+A G + +GS++ RD +N+ DR CNR+ CS R N K +Q+ S++
Sbjct: 1 MDEYSGKKAGDGLAVSRKGSSIILRDTANNRDRNAQFCNRIGCSGRLNSAKGTQISCSEK 60
Query: 492 DKYSS---SSCTSPRSIVGSSSRAYSAVTNHKKDSLYS--QNPSSHKAMLSTEANNIHLE 656
K S S T+ + I+GSSSR YS TN+ + SL + SS S+E +
Sbjct: 61 AKSSRPSFRSSTNGKEIIGSSSRTYSP-TNNSRKSLPGPRKKLSSQPERDSSETGGSPDD 119
Query: 657 NLSSEPSSSTARVAKGLPAAEDTESSVLDGSVNASEVENYNLTLHSRTQKQIYRQSGQGH 836
N E S ++ KGL + D S S N S + ++R++K I+R++G G
Sbjct: 120 NEVPELVSPPGKIQKGLHSESDDSGS----SENTSMEVGTSSISNTRSRKGIHRKAGFGK 175
Query: 837 QEVSVGSSSLKSFVPKKTGQATKTTSHGQSFYAXXXXXXTPQSNRYGLRNLGCXXXXXXX 1016
+ S+GS S + K T QA + + RYGL NL C
Sbjct: 176 PDTSIGSP--VSLLSKNTSQAARA-----------------GAGRYGLGNLRCSSISDAV 216
Query: 1017 XXXXXXXXXQNGR-AEMVKRRNSTGE-CSSPKGKNVSASSSAG-NFGSRKNSVINHSLSL 1187
+ R + +++R GE SS +GK +S SS G N S I+ S
Sbjct: 217 STGSSTSDSKLTRQKDTIRKRICEGESSSSARGKKISGSSLEGRNISSSSGISISDSRRT 276
Query: 1188 XXXXXXXXXXXXXXYWLPSRNGVTSVRTRSTINEDSRSRVSEHGNYNNLSRTEPPVV 1358
NG SVRT + +RSR + G NNL EP V+
Sbjct: 277 RNGTSSRD------------NGPASVRTPRSFGY-TRSRAANQGRGNNLPPNEPHVI 320
>ref|XP_003545543.1| PREDICTED: uncharacterized protein LOC100812055 [Glycine max]
Length = 534
Score = 132 bits (333), Expect(2) = 3e-48
Identities = 79/153 (51%), Positives = 89/153 (58%), Gaps = 13/153 (8%)
Frame = +2
Query: 1694 GGSSQQLNGLS-------------IERDGYQHYNRAGIAEVLLALERIEQXXXXXXXXXX 1834
G SS+QL+G+ I RD + HYN GIAEVLLALERIE
Sbjct: 344 GNSSEQLSGVMPVSPAEDDITHSLINRDSFGHYNMGGIAEVLLALERIE----------- 392
Query: 1835 XXXXXXXXXXXXXXLERIEQDEELTYEQLLVLETNLFLSGLGFRDQHRDMRLDIDNMSYE 2014
QD ELT+EQ+L+LETNLFL+GL F D HR MRLDIDNMSYE
Sbjct: 393 -------------------QDAELTHEQILLLETNLFLNGLNFYDHHRGMRLDIDNMSYE 433
Query: 2015 ELLALGEKMGTVSTGLTEEKLSNCLKRSFYMPA 2113
ELLAL E+MGTVST L EE + CLKRS Y A
Sbjct: 434 ELLALEERMGTVSTALPEEAFAECLKRSIYQSA 466
Score = 88.2 bits (217), Expect(2) = 3e-48
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 2230 DDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 2379
DD KC +CQEEY GDE+G+L+C+H +H+VCI +WLR KNWCPICK AA
Sbjct: 477 DDIKCCICQEEYVVGDEVGDLQCEHRFHVVCIQEWLRHKNWCPICKVSAA 526
Score = 103 bits (257), Expect = 2e-19
Identities = 111/364 (30%), Positives = 160/364 (43%), Gaps = 13/364 (3%)
Frame = +3
Query: 315 MDDYSRKRASGGFGIVGRGSALGFRDASNHDDRTVS-CNRLVCSNRHNFMKSSQV----- 476
MD+YS KR G +G + FRD +N DR C+RL CS+R N K +QV
Sbjct: 1 MDEYSGKRGVDGMVFPRKGMSHVFRDTANTRDRNRQICSRLGCSSRANLPKVAQVRCSEK 60
Query: 477 GNSDRDKYSSSSCTSPRSIVGSSSRAYSAVTNHKKDSLYSQNP-SSHKAMLSTEANNIHL 653
G S R Y SSS S + +GSSSR S N K L + SS S+E +++
Sbjct: 61 GKSLRPSYQSSS--SSKGAIGSSSRTTS---NPAKRLLEPRKTLSSQFEADSSETSSVQD 115
Query: 654 ENLSSEPSSSTARVAKG-LPAAEDTESSVLDGSVNASEVENYNLTLHSRTQKQIYRQSGQ 830
SE T + +G L E+TESS + EV + + ++R+Q+ + +++G
Sbjct: 116 GPEFSELIPPTEEIRRGPLAEGENTESS----NAILMEVGSSSAVSNTRSQRNLNQRAGL 171
Query: 831 GHQEVSVGSSSLKSFVPKKTGQATKTTSHGQSFYAXXXXXXTPQSNRYGLRNLGCXXXXX 1010
QE+ K TG + S + YGLRNL C
Sbjct: 172 RGQEI------------KSTGAVRQAVS-----------------SSYGLRNLKCNSISD 202
Query: 1011 XXXXXXXXXXXQ-NGRAEMVKRRNSTG-ECSSPKGKNVSASSSAG-NFGSRKNSVINHSL 1181
N R + +K+ N G + S+ +GKN++ SS G NFGSR I++S
Sbjct: 203 VVRSGCSSSDSSLNRRKDTIKKGNCEGGDSSTGRGKNITGSSLEGRNFGSRNGISISNSR 262
Query: 1182 SLXXXXXXXXXXXXXXYWLPSRNG--VTSVRTRSTINEDSRSRVSEHGNYNNLSRTEPPV 1355
+PS V SVRT +I+ +R+R S GN N L +E PV
Sbjct: 263 RSRN--------------IPSHRNTSVASVRTPRSISGQARARFSSQGNENPLPTSESPV 308
Query: 1356 VTPI 1367
+ P+
Sbjct: 309 IVPL 312