BLASTX nr result

ID: Coptis24_contig00002347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002347
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631813.1| PREDICTED: uncharacterized protein LOC100257...   412   e-113
ref|XP_002280415.2| PREDICTED: uncharacterized protein LOC100257...   412   e-113
ref|XP_002516172.1| conserved hypothetical protein [Ricinus comm...   400   e-109
ref|XP_002308506.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
ref|XP_004141354.1| PREDICTED: uncharacterized protein LOC101217...   385   e-104

>ref|XP_003631813.1| PREDICTED: uncharacterized protein LOC100257842 isoform 2 [Vitis
            vinifera]
          Length = 398

 Score =  412 bits (1059), Expect = e-113
 Identities = 204/271 (75%), Positives = 236/271 (87%), Gaps = 3/271 (1%)
 Frame = +1

Query: 298  SPSLKMVSNGYVAMEDNK---NQIYKRLDSCLVIPPPKGKKPRAIIKFLGGAFVGAVPEV 468
            S S+KMVSNGYV  +      N+IYKR+DSCLVIPPPKGKKP AII+FLGGAF+GAVPEV
Sbjct: 46   SASVKMVSNGYVRRDSYSGYSNRIYKRVDSCLVIPPPKGKKPTAIIEFLGGAFIGAVPEV 105

Query: 469  TYSHLIELLSKEGYLIISVPYNVTFDHAKAVGEIYERFNACLDRVLTSGLPDAHLTAQEI 648
            TYS+LIELL+ EG+LIISVPYNVTFDHA+A  EIYERFN+CLD +LTSGLPDA L+A E+
Sbjct: 106  TYSYLIELLANEGFLIISVPYNVTFDHAQATREIYERFNSCLDTILTSGLPDASLSASEL 165

Query: 649  AQLPLYSVGHSNGALLQLLTGSYFGEKIPKANAIISFNNRPASEAVPYFEQFGPLISQMV 828
            A LPLYSVGHSNGALLQ+L GSYF EKIPKANAIIS+NNRPA+EAVPYFEQ GPL+ Q++
Sbjct: 166  ACLPLYSVGHSNGALLQVLKGSYFSEKIPKANAIISYNNRPATEAVPYFEQMGPLVRQVM 225

Query: 829  PVVEASPMYPMARNASGDAWKTLLDVAGAVIKEYNEEAVVSLNKFVDQLPLVMNQVTQGV 1008
            P+VEASP Y +A+NAS DAWK LLD+AG +I + ++E +VSL  FVDQLP VMNQVTQG+
Sbjct: 226  PIVEASPAYSLAQNAS-DAWKGLLDMAGTMILDNDQETLVSLTNFVDQLPSVMNQVTQGI 284

Query: 1009 SEFKPTPAENRECFKNSYNVSHTLLVKFNSD 1101
            SEF+PTP+ENRECFKNSYNV  TLLVKFN D
Sbjct: 285  SEFRPTPSENRECFKNSYNVQRTLLVKFNID 315


>ref|XP_002280415.2| PREDICTED: uncharacterized protein LOC100257842 isoform 1 [Vitis
            vinifera] gi|296081745|emb|CBI20750.3| unnamed protein
            product [Vitis vinifera]
          Length = 400

 Score =  412 bits (1059), Expect = e-113
 Identities = 204/271 (75%), Positives = 236/271 (87%), Gaps = 3/271 (1%)
 Frame = +1

Query: 298  SPSLKMVSNGYVAMEDNK---NQIYKRLDSCLVIPPPKGKKPRAIIKFLGGAFVGAVPEV 468
            S S+KMVSNGYV  +      N+IYKR+DSCLVIPPPKGKKP AII+FLGGAF+GAVPEV
Sbjct: 46   SASVKMVSNGYVRRDSYSGYSNRIYKRVDSCLVIPPPKGKKPTAIIEFLGGAFIGAVPEV 105

Query: 469  TYSHLIELLSKEGYLIISVPYNVTFDHAKAVGEIYERFNACLDRVLTSGLPDAHLTAQEI 648
            TYS+LIELL+ EG+LIISVPYNVTFDHA+A  EIYERFN+CLD +LTSGLPDA L+A E+
Sbjct: 106  TYSYLIELLANEGFLIISVPYNVTFDHAQATREIYERFNSCLDTILTSGLPDASLSASEL 165

Query: 649  AQLPLYSVGHSNGALLQLLTGSYFGEKIPKANAIISFNNRPASEAVPYFEQFGPLISQMV 828
            A LPLYSVGHSNGALLQ+L GSYF EKIPKANAIIS+NNRPA+EAVPYFEQ GPL+ Q++
Sbjct: 166  ACLPLYSVGHSNGALLQVLKGSYFSEKIPKANAIISYNNRPATEAVPYFEQMGPLVRQVM 225

Query: 829  PVVEASPMYPMARNASGDAWKTLLDVAGAVIKEYNEEAVVSLNKFVDQLPLVMNQVTQGV 1008
            P+VEASP Y +A+NAS DAWK LLD+AG +I + ++E +VSL  FVDQLP VMNQVTQG+
Sbjct: 226  PIVEASPAYSLAQNAS-DAWKGLLDMAGTMILDNDQETLVSLTNFVDQLPSVMNQVTQGI 284

Query: 1009 SEFKPTPAENRECFKNSYNVSHTLLVKFNSD 1101
            SEF+PTP+ENRECFKNSYNV  TLLVKFN D
Sbjct: 285  SEFRPTPSENRECFKNSYNVQRTLLVKFNID 315


>ref|XP_002516172.1| conserved hypothetical protein [Ricinus communis]
            gi|223544658|gb|EEF46174.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  400 bits (1029), Expect = e-109
 Identities = 193/283 (68%), Positives = 235/283 (83%), Gaps = 13/283 (4%)
 Frame = +1

Query: 292  SLSPSLKMVSNGYVAMEDNK-------------NQIYKRLDSCLVIPPPKGKKPRAIIKF 432
            S S S++MVSNGY   + N              ++ Y ++DSC+VIPPPKGKKPRAIIKF
Sbjct: 46   SRSLSIRMVSNGYAGRDANNLFFTNSTSTSNYDSKKYSKIDSCVVIPPPKGKKPRAIIKF 105

Query: 433  LGGAFVGAVPEVTYSHLIELLSKEGYLIISVPYNVTFDHAKAVGEIYERFNACLDRVLTS 612
            LGGAF+GAVPEVTY +LIELL+KEGY+++ VPYNVTFDHA A  ++YE+FNACLD +LTS
Sbjct: 106  LGGAFIGAVPEVTYGYLIELLAKEGYVVVLVPYNVTFDHAHAANQVYEKFNACLDLLLTS 165

Query: 613  GLPDAHLTAQEIAQLPLYSVGHSNGALLQLLTGSYFGEKIPKANAIISFNNRPASEAVPY 792
            GLPDA+LT  ++  LP++SVGHSNGALLQ+LTGSYF + IPKANAIISFNNRPA+EAVPY
Sbjct: 166  GLPDANLTPAQLVGLPVFSVGHSNGALLQVLTGSYFCDNIPKANAIISFNNRPATEAVPY 225

Query: 793  FEQFGPLISQMVPVVEASPMYPMARNASGDAWKTLLDVAGAVIKEYNEEAVVSLNKFVDQ 972
            FEQ GPLI+QM+P+VEASPMY +AR+ASGDAWK L+D AGA+I +  +EA+ SL +FVDQ
Sbjct: 226  FEQLGPLINQMMPIVEASPMYSIARSASGDAWKMLIDTAGAIIPDSEQEALTSLTRFVDQ 285

Query: 973  LPLVMNQVTQGVSEFKPTPAENRECFKNSYNVSHTLLVKFNSD 1101
            LP VM+QVT+GVSEFKP P+ENR+C +NSYNV HTLLVKF SD
Sbjct: 286  LPSVMSQVTEGVSEFKPRPSENRDCCRNSYNVQHTLLVKFTSD 328


>ref|XP_002308506.1| predicted protein [Populus trichocarpa] gi|222854482|gb|EEE92029.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  390 bits (1002), Expect = e-106
 Identities = 186/244 (76%), Positives = 216/244 (88%)
 Frame = +1

Query: 370  LDSCLVIPPPKGKKPRAIIKFLGGAFVGAVPEVTYSHLIELLSKEGYLIISVPYNVTFDH 549
            ++SCLVIPPPKG+KPRAIIKFLGGAF+GAVPEVTYS LIELL+K+GY++I VPYNVTFDH
Sbjct: 1    MESCLVIPPPKGRKPRAIIKFLGGAFIGAVPEVTYSCLIELLAKDGYVVILVPYNVTFDH 60

Query: 550  AKAVGEIYERFNACLDRVLTSGLPDAHLTAQEIAQLPLYSVGHSNGALLQLLTGSYFGEK 729
            +KA  ++YERFNACLD +L SGLP   LTA E+  LPL+SVGHSNGALLQ+LTGSYF EK
Sbjct: 61   SKAADQVYERFNACLDLLLQSGLPHDGLTASELVGLPLFSVGHSNGALLQVLTGSYFCEK 120

Query: 730  IPKANAIISFNNRPASEAVPYFEQFGPLISQMVPVVEASPMYPMARNASGDAWKTLLDVA 909
            IPKANAIISFNNRPA+EAVPYFEQ GPL++QM+PV EASPMY MAR+ASGDAWK LLD A
Sbjct: 121  IPKANAIISFNNRPATEAVPYFEQLGPLVNQMMPVFEASPMYAMARSASGDAWKVLLDTA 180

Query: 910  GAVIKEYNEEAVVSLNKFVDQLPLVMNQVTQGVSEFKPTPAENRECFKNSYNVSHTLLVK 1089
            G +I +  +EA++SL KFVDQLP V  QVT+G+SEFKPTP+ENR+C +NSYNV HTLLVK
Sbjct: 181  GTIIPDSEQEALISLTKFVDQLPSVFGQVTEGISEFKPTPSENRDCCRNSYNVQHTLLVK 240

Query: 1090 FNSD 1101
            FNSD
Sbjct: 241  FNSD 244


>ref|XP_004141354.1| PREDICTED: uncharacterized protein LOC101217829 [Cucumis sativus]
            gi|449522730|ref|XP_004168379.1| PREDICTED:
            uncharacterized protein LOC101229712 [Cucumis sativus]
          Length = 418

 Score =  385 bits (989), Expect = e-104
 Identities = 184/263 (69%), Positives = 224/263 (85%)
 Frame = +1

Query: 313  MVSNGYVAMEDNKNQIYKRLDSCLVIPPPKGKKPRAIIKFLGGAFVGAVPEVTYSHLIEL 492
            M+SNGY     N N+IYK+L+SCLVIPPP+G+ PRAIIKFLGGAF+GA+PEVTYS+LIE 
Sbjct: 74   MISNGYGGRNSNVNKIYKQLESCLVIPPPRGRPPRAIIKFLGGAFIGAIPEVTYSYLIEF 133

Query: 493  LSKEGYLIISVPYNVTFDHAKAVGEIYERFNACLDRVLTSGLPDAHLTAQEIAQLPLYSV 672
            L+KEG+LIISVPYNVTFDHA A  +++ERF+ CLD VL SGLPD  ++  ++  LPL+SV
Sbjct: 134  LAKEGFLIISVPYNVTFDHADAARQVFERFHVCLDTVLASGLPDEDISPAQLVNLPLFSV 193

Query: 673  GHSNGALLQLLTGSYFGEKIPKANAIISFNNRPASEAVPYFEQFGPLISQMVPVVEASPM 852
            GHSNGALLQ+LTGSYF EKIPKANAIISFNNRPA+EAVPYFEQ GPL SQM+PVV+ASP+
Sbjct: 194  GHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQLGPLTSQMMPVVQASPV 253

Query: 853  YPMARNASGDAWKTLLDVAGAVIKEYNEEAVVSLNKFVDQLPLVMNQVTQGVSEFKPTPA 1032
            Y MAR+AS +A K LLD AGA++ + + E + SL KFVDQLP V +QVT+GVSEF+PTP+
Sbjct: 254  YSMARSASDNARKILLDAAGAIVPDSDREVLNSLTKFVDQLPSVFDQVTEGVSEFRPTPS 313

Query: 1033 ENRECFKNSYNVSHTLLVKFNSD 1101
            ENR+CFK +YN+ +TLLVKF SD
Sbjct: 314  ENRDCFKCNYNIQNTLLVKFISD 336


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