BLASTX nr result

ID: Coptis24_contig00002345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002345
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002522268.1| conserved hypothetical protein [Ricinus comm...   159   2e-37
ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265...   150   1e-34
emb|CBI30727.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|222848017|gb|EEE85564.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  168 bits (425), Expect = 5e-40
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +2

Query: 2   DTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTT 181
           DTPNPWQFWMIMLKSGNMDTY+AKCPK+GH+VGP+GPD+ FPCFGKGCMNQP IYHDYTT
Sbjct: 89  DTPNPWQFWMIMLKSGNMDTYSAKCPKNGHRVGPFGPDTGFPCFGKGCMNQPFIYHDYTT 148

Query: 182 LQGPNRTTLRGSFYGSWD 235
           LQGPNRTTL+G FYGSWD
Sbjct: 149 LQGPNRTTLKGRFYGSWD 166


>ref|XP_002522268.1| conserved hypothetical protein [Ricinus communis]
           gi|223538521|gb|EEF40126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score =  159 bits (402), Expect = 2e-37
 Identities = 66/78 (84%), Positives = 72/78 (92%)
 Frame = +2

Query: 2   DTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTT 181
           DTP+PWQFWMIMLKSGNMDTYAAKCPK+G KVGP+G D  FPCFG+GCMNQP IYHDYTT
Sbjct: 145 DTPSPWQFWMIMLKSGNMDTYAAKCPKNGQKVGPFGSDPNFPCFGQGCMNQPFIYHDYTT 204

Query: 182 LQGPNRTTLRGSFYGSWD 235
           L+GPNRTTL+G FYGSWD
Sbjct: 205 LKGPNRTTLKGRFYGSWD 222


>ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265127 [Vitis vinifera]
          Length = 514

 Score =  150 bits (379), Expect = 1e-34
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +2

Query: 2   DTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTT 181
           DTP PWQFWMIMLKSGNMDTYAAKCPK+GHKVGPYGPD +FPCFG+GCMN PLIYH+YTT
Sbjct: 154 DTPKPWQFWMIMLKSGNMDTYAAKCPKNGHKVGPYGPDDQFPCFGEGCMNHPLIYHNYTT 213

Query: 182 LQGPNRTTLRGSFYGSWD 235
           L+G   +T++G FYGSWD
Sbjct: 214 LRG---STMKGRFYGSWD 228


>emb|CBI30727.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  150 bits (379), Expect = 1e-34
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +2

Query: 2   DTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTT 181
           DTP PWQFWMIMLKSGNMDTYAAKCPK+GHKVGPYGPD +FPCFG+GCMN PLIYH+YTT
Sbjct: 107 DTPKPWQFWMIMLKSGNMDTYAAKCPKNGHKVGPYGPDDQFPCFGEGCMNHPLIYHNYTT 166

Query: 182 LQGPNRTTLRGSFYGSWD 235
           L+G   +T++G FYGSWD
Sbjct: 167 LRG---STMKGRFYGSWD 181


>ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|222847706|gb|EEE85253.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  130 bits (327), Expect = 1e-28
 Identities = 53/78 (67%), Positives = 64/78 (82%)
 Frame = +2

Query: 2   DTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKGCMNQPLIYHDYTT 181
           D P PWQFWMIM+KSGNMDT AA CP++G K  P+ P+ RFPCFG GCMN PL+YH+YT+
Sbjct: 98  DNPRPWQFWMIMVKSGNMDTLAATCPQNGKKSTPFPPEPRFPCFGLGCMNMPLMYHNYTS 157

Query: 182 LQGPNRTTLRGSFYGSWD 235
           LQG N + L+GSFYG+WD
Sbjct: 158 LQGDNDSNLKGSFYGTWD 175


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