BLASTX nr result

ID: Coptis24_contig00002334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002334
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68004.1| hypothetical protein VITISV_015845 [Vitis vinifera]    68   4e-09
emb|CBI27475.3| unnamed protein product [Vitis vinifera]               65   2e-08
ref|XP_003537795.1| PREDICTED: uncharacterized protein LOC100796...    61   5e-07
ref|XP_004142324.1| PREDICTED: uncharacterized protein LOC101221...    58   4e-06
ref|XP_003540775.1| PREDICTED: uncharacterized protein LOC100803...    57   5e-06

>emb|CAN68004.1| hypothetical protein VITISV_015845 [Vitis vinifera]
          Length = 278

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
 Frame = +3

Query: 234 IAIAQEYVKADDEEECRRGATIEPESGKGIAATLFSCRNKTGGS---TLSNEVLPTHTSL 404
           ++IAQEYVKAD   E  +  + E E      AT F  RN+ GGS     SN  LP   ++
Sbjct: 133 MSIAQEYVKADKVMEQHKLNSKECELESQFPATDFY-RNEAGGSLNAAQSNRRLPAQDAV 191

Query: 405 GFVSTLSNLDQTKLMNQENSTSEDFIQGSSRMGDPAEDMXXXXXXXXXXXXQIERTMHEA 584
               T   L  T       S  +  +   SR GDPA+DM              E+     
Sbjct: 192 ----TSHKLTMT-------SAGDGIVSNPSRTGDPAQDMLDLFLGPLLKKPLEEKKQFAF 240

Query: 585 VLDEIPLDNRFQERRQKEEFGTQVFPLMKKKSSLKDKVAMFLD 713
           V +++   + F+++ Q+E     + PL KKKSSLKDKVA+FLD
Sbjct: 241 VTEDVKFVHEFKKQCQEE-----MVPLTKKKSSLKDKVAVFLD 278


>emb|CBI27475.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 56/163 (34%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
 Frame = +3

Query: 234 IAIAQEYVKADDEEECRRGATIEPESGKGIAATLFSCRNKTGGS---TLSNEVLPTHTSL 404
           ++IAQEYVKAD   E  +  + E E      AT F  RN+ GGS     SN  LP   ++
Sbjct: 144 MSIAQEYVKADKVMEQHKLNSKECELKSQFPATDFY-RNEAGGSLNAAQSNRRLPAQDAV 202

Query: 405 GFVSTLSNLDQTKLMNQENSTSEDFIQGSSRMGDPAEDMXXXXXXXXXXXXQIERTMHEA 584
               T   L          S  +  +   SR GDPA+DM              E+     
Sbjct: 203 ----TSHKLTMI-------SAGDGIVSNPSRTGDPAQDMLDLFLGPLLKKPLEEKKQFAF 251

Query: 585 VLDEIPLDNRFQERRQKEEFGTQVFPLMKKKSSLKDKVAMFLD 713
           V +++   + F+++ Q+E     + PL KKKSSLKDKVA+FLD
Sbjct: 252 VTEDVKFVHEFKKQCQEE-----MVPLTKKKSSLKDKVAVFLD 289


>ref|XP_003537795.1| PREDICTED: uncharacterized protein LOC100796529 [Glycine max]
          Length = 156

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
 Frame = +3

Query: 234 IAIAQEYVKADDEEECRRGATIEPESGKGIAATLFSCRNKTG---GSTLSNEVLPTHTSL 404
           +AIA++YVK  + ++ +  ++ + ES        F   N+TG    S+  N +       
Sbjct: 9   MAIAEQYVKDYENKDRKERSSRQRES-----KWQFQDTNETGTTLDSSCENRIS------ 57

Query: 405 GFVSTLSNLDQTKLMNQENSTSEDFIQGSSRMGDPAEDMXXXXXXXXXXXXQIERTMHEA 584
                 S   +  L N  ++T E     +S+ GDPA+DM             +E+   ++
Sbjct: 58  ------SGSGREDLSNSTSTTGELIATSTSQTGDPAQDMLDLFLGPLLRKT-LEKEKIKS 110

Query: 585 VLDEIPLDNRFQERRQKEEFGTQVFPLMKKKSSLKDKVAMFLD 713
           V++   + + F  + Q +  G ++ PLMKK+++LKDKVAMFLD
Sbjct: 111 VVENAKITHEFSRQSQDKLAGEEMVPLMKKRNTLKDKVAMFLD 153


>ref|XP_004142324.1| PREDICTED: uncharacterized protein LOC101221064 [Cucumis sativus]
          Length = 311

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
 Frame = +3

Query: 234 IAIAQEYVKADDEEECRRGATIEPESGKGIAATLFSCRNKTGGSTLSNEVLPTHTSLGFV 413
           + IA+EYV+AD + + R     E ES +    T ++ RN+  GS ++N    +  S   +
Sbjct: 160 LVIAKEYVEADKDRDNRHKIYAERESSRINQRTSYT-RNQAEGSFITNN--DSKQSALVL 216

Query: 414 STLSNLDQTKLMNQENSTSEDFIQGSSRMGDPAEDMXXXXXXXXXXXX-QIERTMHEAVL 590
            T    D T +     S  E   +  S MGDPA+DM             +IE++      
Sbjct: 217 KTSIPHDSTAI-----SDGEKVDRSVSTMGDPAKDMLNLFLGPLLKKSVEIEQSKFLTKD 271

Query: 591 DEIPLDNRFQERRQKEEFGTQVFPLMKKKSSLKDKVAMFL 710
            +   D + Q +R  +  G +V  +MKKKSSL+DKVA+FL
Sbjct: 272 VQFSCDLKSQNQRHNDNVG-EVVSVMKKKSSLRDKVAIFL 310


>ref|XP_003540775.1| PREDICTED: uncharacterized protein LOC100803657 [Glycine max]
          Length = 214

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 44/160 (27%), Positives = 78/160 (48%)
 Frame = +3

Query: 234 IAIAQEYVKADDEEECRRGATIEPESGKGIAATLFSCRNKTGGSTLSNEVLPTHTSLGFV 413
           +AIA++YVK  + ++ +  ++ + ES        F   N+TG  TL +     ++S    
Sbjct: 67  MAIAEQYVKDYENKDRKEISSRQHES-----KWQFQVTNETG-HTLDSPCKNENSSKSGR 120

Query: 414 STLSNLDQTKLMNQENSTSEDFIQGSSRMGDPAEDMXXXXXXXXXXXXQIERTMHEAVLD 593
             LS+   T        T E     +S+ GDPA+DM             +E+   ++++ 
Sbjct: 121 EDLSHFTST--------TGELIATSTSQTGDPAQDMLDLFLGPLLRKT-LEKEKSKSIVK 171

Query: 594 EIPLDNRFQERRQKEEFGTQVFPLMKKKSSLKDKVAMFLD 713
            + + + F  + Q +  G ++ PL KK+++ KDKVAMFLD
Sbjct: 172 NVEITHEFTRQSQDKLAGEEIVPLTKKRNTFKDKVAMFLD 211


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