BLASTX nr result

ID: Coptis24_contig00002326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002326
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65738.1| hypothetical protein VITISV_037754 [Vitis vinifera]   362   7e-98
ref|XP_002276639.2| PREDICTED: uncharacterized protein LOC100259...   362   1e-97
emb|CBI39661.3| unnamed protein product [Vitis vinifera]              359   8e-97
ref|XP_002512574.1| conserved hypothetical protein [Ricinus comm...   335   1e-89
ref|XP_002330050.1| predicted protein [Populus trichocarpa] gi|2...   334   2e-89

>emb|CAN65738.1| hypothetical protein VITISV_037754 [Vitis vinifera]
          Length = 444

 Score =  362 bits (930), Expect = 7e-98
 Identities = 189/279 (67%), Positives = 217/279 (77%)
 Frame = +3

Query: 3    VAETRARDMEEEILVLQECLEERNGLLLASASKAEQYLKELDDVRTKFSITQEAADENXX 182
            VAET+A+ MEEEI  LQ+ LEERNG L ASA   E+YL+ELD +R++ S TQ  AD +  
Sbjct: 166  VAETKAKSMEEEIGRLQKSLEERNGQLQASAMTTEKYLQELDGLRSQLSFTQATADASAA 225

Query: 183  XXXXXXXXXXXXXKEVDEKNTLLKEHEDRVNKLGEQLDHLQKDLQEREVSQNQLRDEVLR 362
                         KE+DEKN  LKEH DRVN+LGEQLDHLQKDLQ RE SQ QL+DEVLR
Sbjct: 226  SAQSAQLQCLALIKELDEKNISLKEHGDRVNRLGEQLDHLQKDLQAREYSQKQLKDEVLR 285

Query: 363  IEHDIMLAVAKAGASKDSDLRRILEEVSPKNIEKMNKHLTAKDEEIAKLRDEIRFMSAHW 542
            IEHDIM AVAKAGA++D +LR+IL+EVSPKN EK+NK L AKD+EIAKL+DEIR MSAHW
Sbjct: 286  IEHDIMQAVAKAGANRDCELRKILDEVSPKNFEKINKLLIAKDDEIAKLKDEIRIMSAHW 345

Query: 543  KLKAKDLESQLEKHRRTDQELKKRVLKLEFCLQEARSQTRKLQRTGERRDKALKELKDQL 722
            KLK K++ESQLEKHRR DQELKKRVLKLEFCLQEAR+QTRKLQR GERRDKALKEL+DQL
Sbjct: 346  KLKTKEMESQLEKHRRADQELKKRVLKLEFCLQEARAQTRKLQRMGERRDKALKELRDQL 405

Query: 723  ATKQQEESGNIGKENFWESSGFKXXXXXXXXXXXXFAKR 839
             TKQQ E+  + K+NFWESSGFK            F+KR
Sbjct: 406  VTKQQGEAAGVEKQNFWESSGFKIVVSMSMLILVVFSKR 444


>ref|XP_002276639.2| PREDICTED: uncharacterized protein LOC100259639 [Vitis vinifera]
          Length = 355

 Score =  362 bits (928), Expect = 1e-97
 Identities = 190/279 (68%), Positives = 218/279 (78%)
 Frame = +3

Query: 3   VAETRARDMEEEILVLQECLEERNGLLLASASKAEQYLKELDDVRTKFSITQEAADENXX 182
           VAET+A+ MEEEI  LQ+ LEERNG L ASA   E+YL+ELD +R++ S TQ  AD +  
Sbjct: 77  VAETKAKSMEEEIGRLQKSLEERNGQLQASAMTTEKYLQELDGLRSQLSFTQATADASAA 136

Query: 183 XXXXXXXXXXXXXKEVDEKNTLLKEHEDRVNKLGEQLDHLQKDLQEREVSQNQLRDEVLR 362
                        KE+DEKN  LKEH DRVN+LGEQLD+LQKDLQ RE SQ QL+DEVLR
Sbjct: 137 SAQSAQLQCLALIKELDEKNISLKEHGDRVNRLGEQLDNLQKDLQAREYSQKQLKDEVLR 196

Query: 363 IEHDIMLAVAKAGASKDSDLRRILEEVSPKNIEKMNKHLTAKDEEIAKLRDEIRFMSAHW 542
           IEHDIM AVAKAGA++D +LR+IL+EVSPKN EK+NK L AKD+EIAKL+DEIR MSAHW
Sbjct: 197 IEHDIMQAVAKAGANRDCELRKILDEVSPKNFEKINKLLIAKDDEIAKLKDEIRIMSAHW 256

Query: 543 KLKAKDLESQLEKHRRTDQELKKRVLKLEFCLQEARSQTRKLQRTGERRDKALKELKDQL 722
           KLK K++ESQLEKHRR DQELKKRVLKLEFCLQEAR+QTRKLQR GERRDKALKEL+DQL
Sbjct: 257 KLKTKEMESQLEKHRRADQELKKRVLKLEFCLQEARAQTRKLQRMGERRDKALKELRDQL 316

Query: 723 ATKQQEESGNIGKENFWESSGFKXXXXXXXXXXXXFAKR 839
           ATKQQ E+  I K+NFWESSGFK            F+KR
Sbjct: 317 ATKQQVEAAGIEKQNFWESSGFKIVVSMSMLILVVFSKR 355


>emb|CBI39661.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  359 bits (921), Expect = 8e-97
 Identities = 188/278 (67%), Positives = 217/278 (78%)
 Frame = +3

Query: 6   AETRARDMEEEILVLQECLEERNGLLLASASKAEQYLKELDDVRTKFSITQEAADENXXX 185
           +ET+A+ MEEEI  LQ+ LEERNG L ASA   E+YL+ELD +R++ S TQ  AD +   
Sbjct: 72  SETKAKSMEEEIGRLQKSLEERNGQLQASAMTTEKYLQELDGLRSQLSFTQATADASAAS 131

Query: 186 XXXXXXXXXXXXKEVDEKNTLLKEHEDRVNKLGEQLDHLQKDLQEREVSQNQLRDEVLRI 365
                       KE+DEKN  LKEH DRVN+LGEQLD+LQKDLQ RE SQ QL+DEVLRI
Sbjct: 132 AQSAQLQCLALIKELDEKNISLKEHGDRVNRLGEQLDNLQKDLQAREYSQKQLKDEVLRI 191

Query: 366 EHDIMLAVAKAGASKDSDLRRILEEVSPKNIEKMNKHLTAKDEEIAKLRDEIRFMSAHWK 545
           EHDIM AVAKAGA++D +LR+IL+EVSPKN EK+NK L AKD+EIAKL+DEIR MSAHWK
Sbjct: 192 EHDIMQAVAKAGANRDCELRKILDEVSPKNFEKINKLLIAKDDEIAKLKDEIRIMSAHWK 251

Query: 546 LKAKDLESQLEKHRRTDQELKKRVLKLEFCLQEARSQTRKLQRTGERRDKALKELKDQLA 725
           LK K++ESQLEKHRR DQELKKRVLKLEFCLQEAR+QTRKLQR GERRDKALKEL+DQLA
Sbjct: 252 LKTKEMESQLEKHRRADQELKKRVLKLEFCLQEARAQTRKLQRMGERRDKALKELRDQLA 311

Query: 726 TKQQEESGNIGKENFWESSGFKXXXXXXXXXXXXFAKR 839
           TKQQ E+  I K+NFWESSGFK            F+KR
Sbjct: 312 TKQQVEAAGIEKQNFWESSGFKIVVSMSMLILVVFSKR 349


>ref|XP_002512574.1| conserved hypothetical protein [Ricinus communis]
           gi|223548535|gb|EEF50026.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 340

 Score =  335 bits (860), Expect = 1e-89
 Identities = 176/263 (66%), Positives = 204/263 (77%), Gaps = 1/263 (0%)
 Frame = +3

Query: 6   AETRARDMEEEILVLQECLEERNGLLLASASKAEQYLKELDDVRTKFSITQEAADENXXX 185
           AE +A+ MEEEI +LQ  LEERNG L  SAS AE+YL ELD +R++ + TQ  AD +   
Sbjct: 62  AENKAKTMEEEICILQRRLEERNGQLQTSASTAEKYLDELDGLRSQLAATQATADASAAS 121

Query: 186 XXXXXXXXXXXXKEVDEKNTLLKEHEDRVNKLGEQLDHLQKDLQEREVSQNQLRDEVLRI 365
                       KE+D KN+ LKEHEDRV +LGEQLD+LQKDLQ RE SQ QL+D+VLRI
Sbjct: 122 AQSAQLQCLALLKELDMKNSSLKEHEDRVTRLGEQLDNLQKDLQARESSQRQLKDDVLRI 181

Query: 366 EHDIMLAVAKAGASKDSDLRRILEEVSPKNIEKMNKHLTAKDEEIAKLRDEIRFMSAHWK 545
           E DIM A+AKAG  KD +LR++L+EVSPKN EK+N+ L  KDEEIAKL+DEIR MSAHWK
Sbjct: 182 EQDIMEAIAKAGTGKDCELRKLLDEVSPKNFEKINRLLVVKDEEIAKLKDEIRIMSAHWK 241

Query: 546 LKAKDLESQLEKHRRTDQELKKRVLKLEFCLQEARSQTRKLQRTGERRDKALKELKDQLA 725
           LK KDLE+QLEK RR DQELKKRVLKLEFCLQEARSQTRKLQR GERRDKALKEL++QLA
Sbjct: 242 LKTKDLETQLEKQRRADQELKKRVLKLEFCLQEARSQTRKLQRMGERRDKALKELREQLA 301

Query: 726 TKQQE-ESGNIGKENFWESSGFK 791
            KQQ    GN  K+NFWE+S FK
Sbjct: 302 AKQQSLPVGNSEKQNFWETSSFK 324


>ref|XP_002330050.1| predicted protein [Populus trichocarpa] gi|222871475|gb|EEF08606.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  334 bits (857), Expect = 2e-89
 Identities = 178/279 (63%), Positives = 210/279 (75%), Gaps = 1/279 (0%)
 Frame = +3

Query: 6   AETRARDMEEEILVLQECLEERNGLLLASASKAEQYLKELDDVRTKFSITQEAADENXXX 185
           AE +A+ MEEEI  LQE +EERNG LLASAS A++YL ELD +R++ + TQ  AD +   
Sbjct: 66  AENKAKIMEEEISRLQERMEERNGQLLASASTADKYLTELDRLRSQLAATQATADASAAS 125

Query: 186 XXXXXXXXXXXXKEVDEKNTLLKEHEDRVNKLGEQLDHLQKDLQEREVSQNQLRDEVLRI 365
                       KE+D KN+ LKEHE+RV +LGEQLD+LQKDLQ RE SQ QL+DEV RI
Sbjct: 126 AQSAQLQCLALIKELDAKNSSLKEHEERVTRLGEQLDNLQKDLQARESSQKQLKDEVTRI 185

Query: 366 EHDIMLAVAKAGASKDSDLRRILEEVSPKNIEKMNKHLTAKDEEIAKLRDEIRFMSAHWK 545
           EHDIM A+++AG SKD +LR++L+EVSPKN EKMNK L  KDEEI KL+DEIR MSAHWK
Sbjct: 186 EHDIMKAISQAGDSKDCELRKLLDEVSPKNFEKMNKLLVVKDEEITKLKDEIRVMSAHWK 245

Query: 546 LKAKDLESQLEKHRRTDQELKKRVLKLEFCLQEARSQTRKLQRTGERRDKALKELKDQLA 725
           LK K+LESQLEK RR DQELKKRVLKLEFCLQEAR+QTRKLQR GERRDKA+KEL+DQLA
Sbjct: 246 LKTKELESQLEKQRRADQELKKRVLKLEFCLQEARAQTRKLQRMGERRDKAIKELRDQLA 305

Query: 726 TKQQEES-GNIGKENFWESSGFKXXXXXXXXXXXXFAKR 839
            K+Q  S  N  K+NFWE+S FK            F+KR
Sbjct: 306 AKKQAISEANNDKQNFWETSSFKVVVSMSMLILVVFSKR 344


Top