BLASTX nr result

ID: Coptis24_contig00002325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002325
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510159.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
ref|XP_003611668.1| hypothetical protein MTR_5g016530 [Medicago ...    66   8e-09
ref|XP_002524921.1| conserved hypothetical protein [Ricinus comm...    65   2e-08
ref|XP_003516611.1| PREDICTED: uncharacterized protein LOC100803...    64   4e-08
ref|XP_002278497.1| PREDICTED: uncharacterized protein LOC100243...    63   7e-08

>ref|XP_002510159.1| conserved hypothetical protein [Ricinus communis]
           gi|223550860|gb|EEF52346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = +3

Query: 339 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSAKDAIS 518
           ET VDT+DYR+PAG D+P +KENV ++H  K   E   GVL+   AAVT T++SAKDAI 
Sbjct: 16  ETTVDTIDYRTPAGADEP-RKENVGVVH-LKRNKEEDSGVLARTAAAVTNTIESAKDAIV 73

Query: 519 GHPTKESSK 545
           G    +++K
Sbjct: 74  GKSKDDTTK 82


>ref|XP_003611668.1| hypothetical protein MTR_5g016530 [Medicago truncatula]
           gi|355513003|gb|AES94626.1| hypothetical protein
           MTR_5g016530 [Medicago truncatula]
          Length = 76

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = +3

Query: 324 ASNVK---ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTV 494
           A NV+   E +V+TVD+RS AG+ Q  ++ NVQ+IHQ  P  +T GGVL+ A AA+  T+
Sbjct: 9   AMNVRSSIEKKVETVDHRSSAGQGQGQEERNVQVIHQ--PHSKTSGGVLTGAAAAMASTL 66

Query: 495 QSAKDAIS 518
           QSAKDAIS
Sbjct: 67  QSAKDAIS 74


>ref|XP_002524921.1| conserved hypothetical protein [Ricinus communis]
           gi|223535756|gb|EEF37418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
 Frame = +3

Query: 288 NQQFITSLQT*MASNVKETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDE---TKGGV 458
           N Q      T  A    E  ++T+DYRS AG+ Q  +  NVQ+IHQ+ P  E   T GGV
Sbjct: 2   NSQVRKETVTTNAQGDVEKRIETIDYRSSAGQGQEMR--NVQVIHQSNPNKEKSNTSGGV 59

Query: 459 LSDATAAVTKTVQSAKDAIS 518
           LS+A A+V  T+QSAK+AIS
Sbjct: 60  LSNAAASVASTLQSAKEAIS 79


>ref|XP_003516611.1| PREDICTED: uncharacterized protein LOC100803203 [Glycine max]
          Length = 76

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +3

Query: 324 ASNVKETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSA 503
           A N  E +V+TVDYRS AG+ Q  ++ NVQ+IHQ      T GGVL+ A AAV  T+QSA
Sbjct: 13  AQNGMEKKVETVDYRSSAGQRQ--EERNVQVIHQPH-STNTSGGVLAGAAAAVASTLQSA 69

Query: 504 KDAIS 518
           KDAIS
Sbjct: 70  KDAIS 74


>ref|XP_002278497.1| PREDICTED: uncharacterized protein LOC100243912 [Vitis vinifera]
          Length = 78

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = +3

Query: 339 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSAKDAIS 518
           ET VDTV+ RS  G+ Q  ++   +++HQ  PG  T GGVL DA AAV  T+QSAKDA+S
Sbjct: 19  ETRVDTVECRSSPGQVQETRR--AEVVHQPHPGSATTGGVLVDAAAAVANTLQSAKDAVS 76


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