BLASTX nr result

ID: Coptis24_contig00002323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002323
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242...   179   7e-43
emb|CBI39045.3| unnamed protein product [Vitis vinifera]              178   9e-43
ref|XP_002319723.1| predicted protein [Populus trichocarpa] gi|2...   132   6e-29
ref|NP_568549.1| uncharacterized protein [Arabidopsis thaliana] ...   131   2e-28
gb|AAM65559.1| unknown [Arabidopsis thaliana]                         129   5e-28

>ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242796 [Vitis vinifera]
          Length = 175

 Score =  179 bits (453), Expect = 7e-43
 Identities = 94/159 (59%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
 Frame = -3

Query: 671 QPSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFG 492
           QP  PF+E++CK S   RRFA GTEAGFA+ LIN+KLD G+PLA +IEAVKEGEEP+SFG
Sbjct: 18  QPLPPFVEVMCKSSGRTRRFAAGTEAGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFG 77

Query: 491 PNAVLVDYGYGWKLQTVIDEGFV---KEKGERTTNEQTPDVVQKTDNLQRSTSELKPHIS 321
           PNAVLVDYG GWKL+TV D  F    KEK  + T  + P  +  +   + + S  +P IS
Sbjct: 78  PNAVLVDYGDGWKLETVTDVEFAGVGKEKRVQPTKVKIPKSLGGSHPSESAVSS-QPVIS 136

Query: 320 FPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 204
           F YIG+I +A+ FI  LG +FTLALENLPRL LF+ SSM
Sbjct: 137 FVYIGKIFIAIIFIFALGAVFTLALENLPRLILFINSSM 175


>emb|CBI39045.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  178 bits (452), Expect = 9e-43
 Identities = 94/160 (58%), Positives = 115/160 (71%), Gaps = 4/160 (2%)
 Frame = -3

Query: 671 QPSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFG 492
           QP  PF+E++CK S   RRFA GTEAGFA+ LIN+KLD G+PLA +IEAVKEGEEP+SFG
Sbjct: 18  QPLPPFVEVMCKSSGRTRRFAAGTEAGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFG 77

Query: 491 PNAVLVDYGYGWKLQTVIDEGFV----KEKGERTTNEQTPDVVQKTDNLQRSTSELKPHI 324
           PNAVLVDYG GWKL+TV D  F     KEK  + T  + P  +  +   + + S  +P I
Sbjct: 78  PNAVLVDYGDGWKLETVTDVEFAVGVGKEKRVQPTKVKIPKSLGGSHPSESAVSS-QPVI 136

Query: 323 SFPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 204
           SF YIG+I +A+ FI  LG +FTLALENLPRL LF+ SSM
Sbjct: 137 SFVYIGKIFIAIIFIFALGAVFTLALENLPRLILFINSSM 176


>ref|XP_002319723.1| predicted protein [Populus trichocarpa] gi|222858099|gb|EEE95646.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  132 bits (333), Expect = 6e-29
 Identities = 72/137 (52%), Positives = 89/137 (64%)
 Frame = -3

Query: 614 FAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGYGWKLQTVID 435
           FA GT+AGFA+ LINRKLD G P   +IEAVK+GEEPISFGP+AVLVDYG  WKLQT   
Sbjct: 1   FAAGTKAGFAVSLINRKLDVGAPFVLHIEAVKDGEEPISFGPDAVLVDYGNDWKLQTFT- 59

Query: 434 EGFVKEKGERTTNEQTPDVVQKTDNLQRSTSELKPHISFPYIGRIVLALTFIILLGVMFT 255
              V + G R          Q +D  + + +   P ISF Y+ +I++A   + +LG  FT
Sbjct: 60  ---VLDYGVRQAEHFQRIPKQSSDGSRPAKTATNPGISFLYMAKILVAFVLLFVLGASFT 116

Query: 254 LALENLPRLFLFVTSSM 204
           LALENLPRL LF+ S M
Sbjct: 117 LALENLPRLILFINSFM 133


>ref|NP_568549.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20260402|gb|AAM13099.1| unknown protein [Arabidopsis
           thaliana] gi|22136186|gb|AAM91171.1| unknown protein
           [Arabidopsis thaliana] gi|332006813|gb|AED94196.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 156

 Score =  131 bits (329), Expect = 2e-28
 Identities = 75/157 (47%), Positives = 95/157 (60%)
 Frame = -3

Query: 677 LLQPSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPIS 498
           ++  +SPFLE+ C+ S    RF  GT+A FA+ +INRKL S  P   YIEA KEGEEPIS
Sbjct: 1   MVDDTSPFLEVFCEVSGKDYRFTTGTKAEFAVSVINRKLGSLKPRVIYIEAAKEGEEPIS 60

Query: 497 FGPNAVLVDYGYGWKLQTVIDEGFVKEKGERTTNEQTPDVVQKTDNLQRSTSELKPHISF 318
           FG NA L++YG GWKL+TV+D        E+   +Q    V  T     ST E+    S 
Sbjct: 61  FGDNASLLNYGLGWKLKTVVDADL--PGTEKNNRQQRFSSVFSTGFANDSTPEIGEQ-SL 117

Query: 317 PYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSS 207
            YIGRI  A   + +LG +FT+ALENLPRL L   +S
Sbjct: 118 KYIGRIFFAFVLMFILGGLFTVALENLPRLILLFNNS 154


>gb|AAM65559.1| unknown [Arabidopsis thaliana]
          Length = 156

 Score =  129 bits (325), Expect = 5e-28
 Identities = 74/157 (47%), Positives = 95/157 (60%)
 Frame = -3

Query: 677 LLQPSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPIS 498
           ++  +SPFLE+ C+ S    RF  GT+A FA+ +INRKL S  P   YIEA KEGEEPIS
Sbjct: 1   MVDDTSPFLEVFCEVSGKDYRFTTGTKAEFAVSVINRKLGSLKPRVIYIEAAKEGEEPIS 60

Query: 497 FGPNAVLVDYGYGWKLQTVIDEGFVKEKGERTTNEQTPDVVQKTDNLQRSTSELKPHISF 318
           FG NA L++YG GWKL+TV+D        E+   +Q    V  T   + S  E+    S 
Sbjct: 61  FGDNASLLNYGLGWKLKTVVDADL--PGTEKNNRQQRFSSVFSTGFAKDSAPEIGEQ-SL 117

Query: 317 PYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSS 207
            YIGRI  A   + +LG +FT+ALENLPRL L   +S
Sbjct: 118 KYIGRIFFAFVLMFILGGLFTVALENLPRLILLFNNS 154


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