BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002321
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC89654.1| RBP42 [Elaeis guineensis]                              331   3e-88
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   330   8e-88
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cy...   308   2e-81
ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cy...   306   1e-80

>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score =  331 bits (848), Expect = 3e-88
 Identities = 190/352 (53%), Positives = 222/352 (63%), Gaps = 2/352 (0%)
 Frame = +1

Query: 64   MDPSLKKRKTEDINNNNGTTLTEPITGLTLEDARKIIEPLTQEQLIEIVQNSLTRHLDVL 243
            MDP+ KKRK+++    NG  +  P   LT EDARKI+EP T+E L++IV+ ++ R   VL
Sbjct: 1    MDPTSKKRKSDE----NGAVVASPAL-LTPEDARKIVEPFTREHLLDIVREAMCRDAGVL 55

Query: 244  ESVRLIADRDPTQRKLFIRGLGWDTTTENLRTLFSTYGELEEAVVILDKTTGKSKGYGFI 423
            ++VR IADRDP QRKLFIRGLGW+TTTE+LR LFS+YGELEEAVVI+DK TGKSKGYGFI
Sbjct: 56   DAVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFI 115

Query: 424  TFKHIDAALLALKEPSKKIDGRMTVTQLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 603
            TF+HID ALLALKEPSKKIDGRMTVTQLAAA                            D
Sbjct: 116  TFRHIDGALLALKEPSKKIDGRMTVTQLAAA------------------GTTAAAPPAID 157

Query: 604  VMMRKIYVGNVPFDMPADRLLAHFLSYGEIEEGPLGFDKQTGKSKGFALFVYKTPEAARA 783
            V +RKIYVGNVP DMP+DRLLAHF SYGEIEEGPLGFDKQTGK +GFALFVYKT E A A
Sbjct: 158  VSLRKIYVGNVPADMPSDRLLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGA 217

Query: 784  SLVDQVKTIDGHQVSCKLASEGKR-KXXXXXXXXXXXXXXXXXXXXQAQTSMGNSGVSQF 960
            SLVD  K IDGH + CKLA +GK+ K                         +G  G+   
Sbjct: 218  SLVDPTKNIDGHHLVCKLAIDGKKVKPGAPAAGAAAPVGGVQGQRMGGGADIGGDGLGMG 277

Query: 961  XXXXXXXXXXXXXXXXXXXXXXXXXHHHLTSSLQSNVGSGT-GLSTGGNQVP 1113
                                     HHH      S++G+GT GLS+ G+QVP
Sbjct: 278  HQSSLPGSFGGYSGGGIPGAAGLGQHHH-----PSSIGAGTPGLSSVGSQVP 324



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1306 YGGFG---SLYRLPPGSVGLPSSGYPETGHYGLSSSAFPGQ 1419
            YGGFG   SLYR+PP SVG+PS GYPE+GHY LSSSA+  Q
Sbjct: 348  YGGFGGGSSLYRMPPSSVGMPSGGYPESGHYPLSSSAYQSQ 388


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
            gi|147789426|emb|CAN66609.1| hypothetical protein
            VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  330 bits (845), Expect = 8e-88
 Identities = 196/349 (56%), Positives = 220/349 (63%), Gaps = 4/349 (1%)
 Frame = +1

Query: 79   KKRKTEDINNNNGTTLTEPITGLTLEDARKIIEPLTQEQLIEIVQNSLTRHLDVLESVRL 258
            KKRK ++  N   +T  + +T L  EDARKIIEP   +QL+EI+QN+  RHLDVL+++R 
Sbjct: 5    KKRKMDE--NGLVSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAIRS 62

Query: 259  IADRDPTQRKLFIRGLGWDTTTENLRTLFSTYGELEEAVVILDKTTGKSKGYGFITFKHI 438
            IADRD TQRKLFIRGLGWDTTTE LR LFS YGELEEAVVILDK T KSKGYGF+TFKH+
Sbjct: 63   IADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHV 122

Query: 439  DAALLALKEPSKKIDGRMTVTQLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVMMRK 618
            D ALLALKEPSKKIDGRMTVTQLAA+                            DV MRK
Sbjct: 123  DGALLALKEPSKKIDGRMTVTQLAAS----------------GLSGPASNASAVDVSMRK 166

Query: 619  IYVGNVPFDMPADRLLAHFLSYGEIEEGPLGFDKQTGKSKGFALFVYKTPEAARASLVDQ 798
            IYV NVP DMPADRLLAHF SYGEIEEGPLGFDKQTGKS+GFALFVYKT EAA+A+LVD 
Sbjct: 167  IYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDP 226

Query: 799  VKTIDGHQVSCKLASEGKR----KXXXXXXXXXXXXXXXXXXXXQAQTSMGNSGVSQFXX 966
             K IDG Q+ CKLA EGK+                           Q SM  S  SQ+  
Sbjct: 227  TKMIDGRQLVCKLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGVPPQGSMPGSLGSQY-- 284

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXHHHLTSSLQSNVGSGTGLSTGGNQVP 1113
                                   HH L SSL S++G G GLS   +QVP
Sbjct: 285  -PGGPGGISAYGGFSGGPPPLGHHHPLNSSLPSSLGGGPGLS---SQVP 329



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +1

Query: 1309 GGFGSLYRLPPGSVGLPSSGYPETGHYGL-SSSAFPGQLHQXXXXXXXXXXXXGAMYPSL 1485
            GG  SLYRLPP +VG+PS GYP++GHY L SSSA+P Q+HQ            G MYPS 
Sbjct: 386  GGGSSLYRLPPSTVGMPSGGYPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMYPSG 445

Query: 1486 PPFY 1497
            PP+Y
Sbjct: 446  PPYY 449


>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  315 bits (808), Expect = 2e-83
 Identities = 166/264 (62%), Positives = 198/264 (75%)
 Frame = +1

Query: 64  MDPSLKKRKTEDINNNNGTTLTEPITGLTLEDARKIIEPLTQEQLIEIVQNSLTRHLDVL 243
           MDP+ KKRK E+    + TT  +    LT +DARK++E  T +QL++I+QN++ RH D+L
Sbjct: 1   MDPT-KKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDIL 59

Query: 244 ESVRLIADRDPTQRKLFIRGLGWDTTTENLRTLFSTYGELEEAVVILDKTTGKSKGYGFI 423
           E+VR IAD D TQRKLFIRGLGW+TTTENLR LFSTYGELEEAVVILDK TGKSKGYGF+
Sbjct: 60  EAVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFV 119

Query: 424 TFKHIDAALLALKEPSKKIDGRMTVTQLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 603
            +KH+D ALLALKEPSKKIDGR+TVTQLA A                            D
Sbjct: 120 IYKHVDGALLALKEPSKKIDGRVTVTQLAIA----------GNSGANNNNNSSANPGVVD 169

Query: 604 VMMRKIYVGNVPFDMPADRLLAHFLSYGEIEEGPLGFDKQTGKSKGFALFVYKTPEAARA 783
           V MRKIYV NVP++MP+D+LL HF  YGEIEEGPLGFDKQTGKSKGFALFVYKT E A+A
Sbjct: 170 VAMRKIYVANVPYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQA 229

Query: 784 SLVDQVKTIDGHQVSCKLASEGKR 855
           +L++ VK I+G Q++CKLA +GKR
Sbjct: 230 ALLEPVKMIEGRQLNCKLAIDGKR 253


>ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 425

 Score =  308 bits (789), Expect = 2e-81
 Identities = 160/265 (60%), Positives = 204/265 (76%), Gaps = 1/265 (0%)
 Frame = +1

Query: 64  MDPSLKKRKTEDINNNNGTTLTEPITGLTLEDARKIIEPLTQEQLIEIVQNSLTRHLDVL 243
           MDP+ K++  E+  NNN ++  +P+  L+  + RK+IE  T +QL++I+Q+++ RHLDVL
Sbjct: 1   MDPTKKRKLDENGFNNNDSS--DPLK-LSPSEVRKLIERFTSDQLLDILQDAVARHLDVL 57

Query: 244 ESVRLIADRDPTQRKLFIRGLGWDTTTENLRTLFSTYGELEEAVVILDKTTGKSKGYGFI 423
            +VR +AD D +QRKLFIRGLGWDTTT+ LR+LFST+G+LEEAVVILDK TGKSKGYGF+
Sbjct: 58  AAVRAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFV 117

Query: 424 TFKHIDAALLALKEPSKKIDGRMTVTQLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 603
           TF+H+D ALLAL+EPSK+IDGR+TVTQLAAA                            D
Sbjct: 118 TFRHVDGALLALREPSKRIDGRVTVTQLAAA------------------GNSASNVNPAD 159

Query: 604 VMMRKIYVGNVPFDMPADRLLAHFLSYGEIEEGPLGFDKQTGKSKGFALFVYKTPEAARA 783
           V +RKIYV NVP D+PAD+LLAHF  YGEIEEGPLGFDKQTGKSKGFALFVYK+PE A+A
Sbjct: 160 VALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQA 219

Query: 784 SLVDQVKTIDGHQVSCKLA-SEGKR 855
           +L+D VKT++G Q+SCKLA ++GK+
Sbjct: 220 ALIDPVKTVEGRQLSCKLAITDGKQ 244



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
 Frame = +1

Query: 1309 GGFGSLYRLPPGSVGLPSSG---YPETGHYGLS-SSAFPGQLHQXXXXXXXXXXXXGAMY 1476
            GG  S+YRLP GS G+P+ G   YP++GHYGLS SS +  Q H             G+MY
Sbjct: 360  GGGSSMYRLP-GSGGMPAGGTGGYPDSGHYGLSASSGYQNQHHPPSGTSPMPRVPPGSMY 418

Query: 1477 PSLPPFY 1497
            P++PP+Y
Sbjct: 419  PNMPPYY 425


>ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 437

 Score =  306 bits (783), Expect = 1e-80
 Identities = 161/267 (60%), Positives = 205/267 (76%), Gaps = 3/267 (1%)
 Frame = +1

Query: 64  MDPSLKKRKTED--INNNNGTTLTEPITGLTLEDARKIIEPLTQEQLIEIVQNSLTRHLD 237
           MDP+ K++  E+  INN++    +EP+  L+  DARK+IE  T +QL++I+Q+++ RH D
Sbjct: 1   MDPTKKRKLDENGFINNDS----SEPLK-LSPSDARKLIERFTTDQLLDILQDTVARHPD 55

Query: 238 VLESVRLIADRDPTQRKLFIRGLGWDTTTENLRTLFSTYGELEEAVVILDKTTGKSKGYG 417
           VL +VR ++D D +QRKLFIRGLGWDTTT+ LR+LFSTYG+LEEAVVILDK TGKSKGYG
Sbjct: 56  VLAAVRAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYG 115

Query: 418 FITFKHIDAALLALKEPSKKIDGRMTVTQLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXX 597
           F+TF+H+D ALLAL+EPSK+IDGR+TVTQLAAA                           
Sbjct: 116 FVTFRHVDGALLALREPSKRIDGRVTVTQLAAA------------------GNSALNANA 157

Query: 598 XDVMMRKIYVGNVPFDMPADRLLAHFLSYGEIEEGPLGFDKQTGKSKGFALFVYKTPEAA 777
            DV +RKIYV NVP D+PAD+LLAHF  YGEIEEGPLGFDKQTGKSKGFALFVYK+PE A
Sbjct: 158 VDVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGA 217

Query: 778 RASLVDQVKTIDGHQVSCKLA-SEGKR 855
           +A+L+D +KT++G Q+SCKLA ++GK+
Sbjct: 218 KAALIDPMKTVEGRQLSCKLAITDGKQ 244