BLASTX nr result

ID: Coptis24_contig00002314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002314
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285737.1| PREDICTED: lysyl-tRNA synthetase [Vitis vini...   523   e-146
emb|CAN72569.1| hypothetical protein VITISV_036995 [Vitis vinifera]   520   e-145
ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus com...   516   e-144
ref|XP_003521059.1| PREDICTED: lysyl-tRNA synthetase-like [Glyci...   512   e-143
ref|XP_004149642.1| PREDICTED: lysine--tRNA ligase-like [Cucumis...   504   e-140

>ref|XP_002285737.1| PREDICTED: lysyl-tRNA synthetase [Vitis vinifera]
            gi|297746486|emb|CBI16542.3| unnamed protein product
            [Vitis vinifera]
          Length = 592

 Score =  523 bits (1347), Expect = e-146
 Identities = 261/322 (81%), Positives = 284/322 (88%)
 Frame = +1

Query: 1    GSAGGADARPFVTHHNALGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 180
            G+AGGA+ARPFVT+HN+LGRDLYLRIATELHLKRMLVGGFEKVYE+GRIFRNEGISTRHN
Sbjct: 271  GAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEMGRIFRNEGISTRHN 330

Query: 181  PEFTTIEMYEAYSDYQSMMNIAEEMIVRCTLEVHGKLTIDYQGLEICLERPWRRETMHNL 360
            PEFTTIEMYEAYSDY+SMMN+AEE++ +C L V GKLTIDYQG EICLERPWRRETM NL
Sbjct: 331  PEFTTIEMYEAYSDYESMMNMAEEIVTQCALAVCGKLTIDYQGTEICLERPWRRETMLNL 390

Query: 361  VREVTGIDFLELGNDXXXXXXXXXXXIGTDPDSKGGSSIEACTSVGHVLNEVFEALVEPT 540
            V+E TGIDF EL ND           +G   DSK  SSIEACTSVGHVLNEVFE +VEP 
Sbjct: 391  VKEATGIDFNELDNDIKVAKEVALRALGIGHDSKDKSSIEACTSVGHVLNEVFEIVVEPQ 450

Query: 541  LLQPTFVLDYPIEISPLAKPHRRHAGLTERFELFVCGRELANAFSELTDPVDQRKRLEEQ 720
            L+QPTFVLDYPIEISPLAKPHRRHAGLTERFELF+CGRELANAFSELTDP+DQR RLEEQ
Sbjct: 451  LIQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRELANAFSELTDPMDQRGRLEEQ 510

Query: 721  VRNHNEKRAESGSVTDISEGKIKKTDDDSYEVTLDEDFLTALEYGMPPASGMGLGIDRLV 900
            VR HNEKRA   S  D +E K  +++D+SYEVTLD+DFLTALEYGMPPASGMGLG+DRLV
Sbjct: 511  VRQHNEKRAAVVSEPDHAEVKTTESEDESYEVTLDDDFLTALEYGMPPASGMGLGVDRLV 570

Query: 901  MLLTNSASIRDVIAFPVLKVQQ 966
            MLLTNSASIRDVIAFPVLKVQQ
Sbjct: 571  MLLTNSASIRDVIAFPVLKVQQ 592


>emb|CAN72569.1| hypothetical protein VITISV_036995 [Vitis vinifera]
          Length = 601

 Score =  520 bits (1340), Expect = e-145
 Identities = 260/322 (80%), Positives = 283/322 (87%)
 Frame = +1

Query: 1    GSAGGADARPFVTHHNALGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 180
            G+AGGA+ARPFVT+HN+LGRDLYLRIATELHLKRMLVGGFEKVYE+GRIFRNEGISTRHN
Sbjct: 280  GAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEMGRIFRNEGISTRHN 339

Query: 181  PEFTTIEMYEAYSDYQSMMNIAEEMIVRCTLEVHGKLTIDYQGLEICLERPWRRETMHNL 360
            PEFTTIEMYEAYSDY+SMMN+AEE++ +C L V GKLTIDYQG EICLERPWRRETM NL
Sbjct: 340  PEFTTIEMYEAYSDYESMMNMAEEIVTQCALAVCGKLTIDYQGTEICLERPWRRETMLNL 399

Query: 361  VREVTGIDFLELGNDXXXXXXXXXXXIGTDPDSKGGSSIEACTSVGHVLNEVFEALVEPT 540
            V+E TGIDF EL  D           +G   DSK  SSIEACTSVGHVLNEVFE +VEP 
Sbjct: 400  VKEATGIDFNELXXDIKVAKEVALRALGIGHDSKDKSSIEACTSVGHVLNEVFEIVVEPQ 459

Query: 541  LLQPTFVLDYPIEISPLAKPHRRHAGLTERFELFVCGRELANAFSELTDPVDQRKRLEEQ 720
            L+QPTFVLDYPIEISPLAKPHRRHAGLTERFELF+CGRELANAFSELTDP+DQR RLEEQ
Sbjct: 460  LIQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRELANAFSELTDPMDQRGRLEEQ 519

Query: 721  VRNHNEKRAESGSVTDISEGKIKKTDDDSYEVTLDEDFLTALEYGMPPASGMGLGIDRLV 900
            VR HNEKRA   S  D +E K  +++D+SYEVTLD+DFLTALEYGMPPASGMGLG+DRLV
Sbjct: 520  VRQHNEKRAAVVSEPDHAEVKTTESEDESYEVTLDDDFLTALEYGMPPASGMGLGVDRLV 579

Query: 901  MLLTNSASIRDVIAFPVLKVQQ 966
            MLLTNSASIRDVIAFPVLKVQQ
Sbjct: 580  MLLTNSASIRDVIAFPVLKVQQ 601


>ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus communis]
            gi|223537362|gb|EEF38991.1| lysyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 585

 Score =  516 bits (1329), Expect = e-144
 Identities = 257/322 (79%), Positives = 282/322 (87%)
 Frame = +1

Query: 1    GSAGGADARPFVTHHNALGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 180
            G+AGGA+ARPFVT+HN+LGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN
Sbjct: 265  GAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 324

Query: 181  PEFTTIEMYEAYSDYQSMMNIAEEMIVRCTLEVHGKLTIDYQGLEICLERPWRRETMHNL 360
            PEFTTIEMYEAYSDYQSMMN+AEE++ RC L VHGKLTIDYQG+++CLERPWRRETMHNL
Sbjct: 325  PEFTTIEMYEAYSDYQSMMNMAEEIVTRCALAVHGKLTIDYQGVDVCLERPWRRETMHNL 384

Query: 361  VREVTGIDFLELGNDXXXXXXXXXXXIGTDPDSKGGSSIEACTSVGHVLNEVFEALVEPT 540
            V+E TGIDF ELGND           +G   + K  SS+E C+SVG++LNEVFE +VEP 
Sbjct: 385  VKEATGIDFNELGNDLKVAKDTTLRNLGPVLEHKDRSSVEGCSSVGNLLNEVFEIVVEPK 444

Query: 541  LLQPTFVLDYPIEISPLAKPHRRHAGLTERFELFVCGRELANAFSELTDPVDQRKRLEEQ 720
            LLQPTFVLDYPIEISPLAKPHRRH GLTERFELF+CGRELANAFSELTDP+DQR RLEEQ
Sbjct: 445  LLQPTFVLDYPIEISPLAKPHRRHVGLTERFELFICGRELANAFSELTDPMDQRGRLEEQ 504

Query: 721  VRNHNEKRAESGSVTDISEGKIKKTDDDSYEVTLDEDFLTALEYGMPPASGMGLGIDRLV 900
            VR HNEKR+ + S     E K  + +DDSY VTLD+DFLTALEYGMPPASGMGLGIDRLV
Sbjct: 505  VRQHNEKRS-TISEAHKEEEKKDEQEDDSYSVTLDDDFLTALEYGMPPASGMGLGIDRLV 563

Query: 901  MLLTNSASIRDVIAFPVLKVQQ 966
            MLLTNSASIRDVIAFPVLKVQQ
Sbjct: 564  MLLTNSASIRDVIAFPVLKVQQ 585


>ref|XP_003521059.1| PREDICTED: lysyl-tRNA synthetase-like [Glycine max]
          Length = 584

 Score =  512 bits (1318), Expect = e-143
 Identities = 252/322 (78%), Positives = 277/322 (86%)
 Frame = +1

Query: 1    GSAGGADARPFVTHHNALGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 180
            G+AGGA+ARPF+T+HN+LGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN
Sbjct: 265  GAAGGAEARPFITYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 324

Query: 181  PEFTTIEMYEAYSDYQSMMNIAEEMIVRCTLEVHGKLTIDYQGLEICLERPWRRETMHNL 360
            PEFTTIEMYEAYSDYQSMMN+AEE++ RC L VHGKLTIDYQG+EICLE+PWRRETMHNL
Sbjct: 325  PEFTTIEMYEAYSDYQSMMNLAEEIVTRCALAVHGKLTIDYQGVEICLEKPWRRETMHNL 384

Query: 361  VREVTGIDFLELGNDXXXXXXXXXXXIGTDPDSKGGSSIEACTSVGHVLNEVFEALVEPT 540
            V+E  GIDF EL ND           +G + D+K   SIEAC SVGH+LNEVFE+ VEP 
Sbjct: 385  VKETAGIDFNELANDLEVAKRVTLDTLGKNLDNKDKGSIEACQSVGHLLNEVFESFVEPK 444

Query: 541  LLQPTFVLDYPIEISPLAKPHRRHAGLTERFELFVCGRELANAFSELTDPVDQRKRLEEQ 720
            L+QPTFVLDYPIEISPLAKPHRR  GLTERFELF+CGREL NAFSELTDP+DQR RLE+Q
Sbjct: 445  LIQPTFVLDYPIEISPLAKPHRRSTGLTERFELFICGRELGNAFSELTDPIDQRGRLEDQ 504

Query: 721  VRNHNEKRAESGSVTDISEGKIKKTDDDSYEVTLDEDFLTALEYGMPPASGMGLGIDRLV 900
            +R H +KRA   +  D  EG   + DDDSYEVTLD+DFLTALEYGMPPASGMGLGIDRLV
Sbjct: 505  IRQHEKKRAAVSTNDDKKEG--TEDDDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLV 562

Query: 901  MLLTNSASIRDVIAFPVLKVQQ 966
            MLLTNS SIRDVI FPVLKVQQ
Sbjct: 563  MLLTNSPSIRDVIPFPVLKVQQ 584


>ref|XP_004149642.1| PREDICTED: lysine--tRNA ligase-like [Cucumis sativus]
            gi|449515797|ref|XP_004164934.1| PREDICTED: lysine--tRNA
            ligase-like [Cucumis sativus]
          Length = 603

 Score =  504 bits (1297), Expect = e-140
 Identities = 245/322 (76%), Positives = 275/322 (85%)
 Frame = +1

Query: 1    GSAGGADARPFVTHHNALGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 180
            G+AGGA+ARPFVT+HN+LGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN
Sbjct: 282  GAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHN 341

Query: 181  PEFTTIEMYEAYSDYQSMMNIAEEMIVRCTLEVHGKLTIDYQGLEICLERPWRRETMHNL 360
            PEFT+IE+YEAYSDYQSMMN+AE+++ RC L +HGKL++DYQG +IC ERPWRRETMHNL
Sbjct: 342  PEFTSIEIYEAYSDYQSMMNMAEKIVTRCALAIHGKLSVDYQGTDICFERPWRRETMHNL 401

Query: 361  VREVTGIDFLELGNDXXXXXXXXXXXIGTDPDSKGGSSIEACTSVGHVLNEVFEALVEPT 540
            V+E TGID  E GND           IG   D K  +SIEA  S+GH+L+E+FE +VEP 
Sbjct: 402  VKETTGIDINEFGNDLKVAKEVTLRTIGDALDGKDTTSIEASQSIGHLLSEIFELVVEPK 461

Query: 541  LLQPTFVLDYPIEISPLAKPHRRHAGLTERFELFVCGRELANAFSELTDPVDQRKRLEEQ 720
            L+QPTFVLDYPIEISPLAKPHRRHAG TERFELF+CGRELANAFSELTDP+DQR R EEQ
Sbjct: 462  LIQPTFVLDYPIEISPLAKPHRRHAGFTERFELFICGRELANAFSELTDPIDQRGRFEEQ 521

Query: 721  VRNHNEKRAESGSVTDISEGKIKKTDDDSYEVTLDEDFLTALEYGMPPASGMGLGIDRLV 900
            +R HNEK   + S TD      KK +DDSYEVTLD+DFLTALEYGMPPASG+G+GIDRLV
Sbjct: 522  MRQHNEKHGSAVSGTDSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLV 581

Query: 901  MLLTNSASIRDVIAFPVLKVQQ 966
            MLLTNSASIRDVIAFPVLK QQ
Sbjct: 582  MLLTNSASIRDVIAFPVLKSQQ 603


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