BLASTX nr result

ID: Coptis24_contig00002303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002303
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890146.1| hypothetical protein ARALYDRAFT_471810 [Arab...   409   e-111
ref|NP_563991.1| uncharacterized protein [Arabidopsis thaliana] ...   407   e-111
ref|XP_002303871.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002271931.1| PREDICTED: uncharacterized protein LOC100263...   402   e-109
ref|XP_002333371.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109

>ref|XP_002890146.1| hypothetical protein ARALYDRAFT_471810 [Arabidopsis lyrata subsp.
           lyrata] gi|297335988|gb|EFH66405.1| hypothetical protein
           ARALYDRAFT_471810 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  409 bits (1050), Expect = e-111
 Identities = 194/248 (78%), Positives = 210/248 (84%)
 Frame = +2

Query: 137 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 316
           PA+IVGGGRVG AL +MGNG DL++KRGEAVP  F GP+LVCTRNDDLDAVL+ TP+SRW
Sbjct: 56  PAVIVGGGRVGRALQEMGNGEDLLVKRGEAVPVDFEGPILVCTRNDDLDAVLEATPQSRW 115

Query: 317 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 496
            DLVFFQNGM+EPW  SKGL D +QVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS
Sbjct: 116 KDLVFFQNGMMEPWFESKGLGDTDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 175

Query: 497 AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 676
            +A RLQ+GGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGA+VG VEKEYR     
Sbjct: 176 EIAARLQSGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGASVGTVEKEYRDEVSI 235

Query: 677 XXXXXXXXXXXXXXXXFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 856
                           FEE MVERLCAYSRAV+HFPTAVKEFKWRNGWFYSL+++AI EG
Sbjct: 236 LIQELAAAAAAEKGLTFEENMVERLCAYSRAVSHFPTAVKEFKWRNGWFYSLSEKAIAEG 295

Query: 857 KPDPCPLH 880
           KPDPCPLH
Sbjct: 296 KPDPCPLH 303


>ref|NP_563991.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6587814|gb|AAF18505.1|AC010924_18 ESTs gb|AI992412,
           gb|AI994629 come from this gene [Arabidopsis thaliana]
           gi|12083328|gb|AAG48823.1|AF332460_1 unknown protein
           [Arabidopsis thaliana] gi|18176355|gb|AAL60029.1|
           unknown protein [Arabidopsis thaliana]
           gi|332191287|gb|AEE29408.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 313

 Score =  407 bits (1046), Expect = e-111
 Identities = 193/248 (77%), Positives = 210/248 (84%)
 Frame = +2

Query: 137 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 316
           PA+IVGGGRVG AL +MGNG DL++KRGEAVP  F GP+LVCTRNDDLDAVL+ TP+SRW
Sbjct: 56  PAVIVGGGRVGRALQEMGNGEDLLVKRGEAVPVDFEGPILVCTRNDDLDAVLEATPQSRW 115

Query: 317 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 496
            DLVFFQNGM+EPW  SKGL D +QVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS
Sbjct: 116 KDLVFFQNGMMEPWFESKGLGDTDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 175

Query: 497 AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 676
            +A RLQ+GGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGA+VG VEKEYR     
Sbjct: 176 EIAARLQSGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGASVGTVEKEYRDEVSR 235

Query: 677 XXXXXXXXXXXXXXXXFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 856
                           FEE MVERLCAYSRAV+HFPTAVKEFKWRNGWFYSL+++AI EG
Sbjct: 236 LIQELAAAAAAEKGLTFEENMVERLCAYSRAVSHFPTAVKEFKWRNGWFYSLSEKAIAEG 295

Query: 857 KPDPCPLH 880
           +PDPCPLH
Sbjct: 296 QPDPCPLH 303


>ref|XP_002303871.1| predicted protein [Populus trichocarpa] gi|222841303|gb|EEE78850.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  402 bits (1034), Expect = e-110
 Identities = 193/249 (77%), Positives = 209/249 (83%)
 Frame = +2

Query: 134 VPAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSR 313
           VPA+IVGGGRVG AL +MG+G+DL++KRG+ VP  F GPVLVCTRNDDLDAVL+ TPKSR
Sbjct: 11  VPAVIVGGGRVGRALQEMGSGQDLLVKRGDPVPLDFEGPVLVCTRNDDLDAVLEVTPKSR 70

Query: 314 WNDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWA 493
           W+DLVFFQNGMLEPW  SKGL D +QVLAYFAVSKLGEPP+DGKTDTNPEGLTAAYGKWA
Sbjct: 71  WSDLVFFQNGMLEPWFQSKGLGDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWA 130

Query: 494 SAVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXX 673
           SAVA RL AGGLSCKVLDKE FQKQMLEKLIWI AFMLVGARHPGATVG VEKE+R    
Sbjct: 131 SAVAARLHAGGLSCKVLDKETFQKQMLEKLIWISAFMLVGARHPGATVGAVEKEFRSEVS 190

Query: 674 XXXXXXXXXXXXXXXXXFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITE 853
                            FEEA+ ERLCAYSRAVAHFPTAVKEFKWRNGWFYSL+ +A+ E
Sbjct: 191 SLIAELASAAAAEKGIVFEEAIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSDKAVAE 250

Query: 854 GKPDPCPLH 880
           GKPDPCPLH
Sbjct: 251 GKPDPCPLH 259


>ref|XP_002271931.1| PREDICTED: uncharacterized protein LOC100263834 [Vitis vinifera]
          Length = 301

 Score =  402 bits (1033), Expect = e-109
 Identities = 192/248 (77%), Positives = 211/248 (85%)
 Frame = +2

Query: 137 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 316
           PA+IVGGGRVG AL  MG+G DL++KRG++VP  F GP+LVCTRNDDLDAVL++TPKSRW
Sbjct: 44  PAVIVGGGRVGRALQGMGSGDDLLVKRGDSVPLDFAGPILVCTRNDDLDAVLESTPKSRW 103

Query: 317 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 496
           +DLVFFQNGMLEPWL SKGL+D +QVLAYFAVSKLGEPP+DGKTDTNPEGLTAAYGKWAS
Sbjct: 104 SDLVFFQNGMLEPWLQSKGLSDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWAS 163

Query: 497 AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 676
           AVA RL AGGLSCKVLDKEAFQKQMLEKLIWI AFMLVGARHPGATVGVVEKE+R     
Sbjct: 164 AVAGRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHPGATVGVVEKEFRSEVSS 223

Query: 677 XXXXXXXXXXXXXXXXFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 856
                           F+E M +RLCAYSRAV+HFPTA KEFKWRNGWFYSL+Q+AI EG
Sbjct: 224 LIGELASAAAVEKGIVFDEGMEDRLCAYSRAVSHFPTAAKEFKWRNGWFYSLSQKAIAEG 283

Query: 857 KPDPCPLH 880
           KPDPCPLH
Sbjct: 284 KPDPCPLH 291


>ref|XP_002333371.1| predicted protein [Populus trichocarpa] gi|222836353|gb|EEE74760.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  400 bits (1029), Expect = e-109
 Identities = 191/248 (77%), Positives = 208/248 (83%)
 Frame = +2

Query: 137 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 316
           PA+IVGGGRVG AL +MG+G+DL++KRG+ VP  F GP+LVCTRNDDLDAVL+ TPKSRW
Sbjct: 12  PAVIVGGGRVGRALQEMGSGQDLLVKRGDPVPLDFEGPILVCTRNDDLDAVLEVTPKSRW 71

Query: 317 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 496
           +DLVFFQNGMLEPW  SKGL D +QVLAYFAVSKLGEPP+DGKTDTNPEGLTAAYGKWAS
Sbjct: 72  SDLVFFQNGMLEPWFQSKGLGDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWAS 131

Query: 497 AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 676
           AVA RL AGGLSCKVLDKE FQKQMLEKLIWI AFMLVGARHPGATVG VEKE+R     
Sbjct: 132 AVAARLHAGGLSCKVLDKETFQKQMLEKLIWISAFMLVGARHPGATVGAVEKEFRSEVSS 191

Query: 677 XXXXXXXXXXXXXXXXFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 856
                           FEEA+ ERLCAYSRAVAHFPTAVKEFKWRNGWFYSL+ +A+ EG
Sbjct: 192 LIAELASAAAAEKGIVFEEAIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSDKAVAEG 251

Query: 857 KPDPCPLH 880
           KPDPCPLH
Sbjct: 252 KPDPCPLH 259


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