BLASTX nr result

ID: Coptis24_contig00002299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002299
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266...   156   1e-35
ref|XP_002531622.1| conserved hypothetical protein [Ricinus comm...   153   8e-35
gb|ABW74476.1| unknown [Paeonia suffruticosa]                         152   1e-34
gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasilie...   151   2e-34
gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasilie...   151   3e-34

>ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]
            gi|297737814|emb|CBI27015.3| unnamed protein product
            [Vitis vinifera]
          Length = 174

 Score =  156 bits (394), Expect = 1e-35
 Identities = 90/180 (50%), Positives = 113/180 (62%), Gaps = 4/180 (2%)
 Frame = -3

Query: 1071 QNALAAACEEMKXXXXXXXXXXNDRRDFVVCPKPRRLGVLNHSMNDPIRTLRWQLSHQVE 892
            Q    AACEEM+           +RR  VVCPKPRRLG+LN ++ DP+R +RW LS+Q E
Sbjct: 3    QYCALAACEEMRRSVPAS-----ERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTE 57

Query: 891  VNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXSRATNPLIQDARFGEEKX 712
            +++SK+G DL+++IL+KGG GAE  + T VA           SR  NPLIQDARFG+EK 
Sbjct: 58   LSDSKSGTDLLDIILAKGGYGAE--SCTQVASSPPFFSGSPPSRVANPLIQDARFGDEKL 115

Query: 711  XXXXXXXXXXXXXXXXSTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 544
                            S +    + GC+RA FG+ P AVRIEGFDCLDRDRRNCSIPA+A
Sbjct: 116  NPISPPLVSVPSGLSSSPSSSARKGGCIRANFGNNP-AVRIEGFDCLDRDRRNCSIPALA 174


>ref|XP_002531622.1| conserved hypothetical protein [Ricinus communis]
            gi|223528740|gb|EEF30750.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 189

 Score =  153 bits (386), Expect = 8e-35
 Identities = 95/194 (48%), Positives = 118/194 (60%), Gaps = 11/194 (5%)
 Frame = -3

Query: 1092 MTQCVYQQNALAAACEEMKXXXXXXXXXXNDRRDFVVCPKPRRLGVLNHSMND-PIRTLR 916
            M QC  Q +A +   EE++           +RRD VVCPKPRR G+ N S+ND P+R+LR
Sbjct: 1    MKQCAIQTSAFSTR-EEIRSSVSGTMS---ERRDPVVCPKPRRFGLFNASVNDHPVRSLR 56

Query: 915  WQLSHQVEVNESKAGVDLMELILSKGG-NGAEQSAATHVA-XXXXXXXXXXXSRATNPLI 742
            W LSHQ E+ ESKAG DL+++IL+KGG  G EQ + T VA            SR  NPLI
Sbjct: 57   WHLSHQTEICESKAGNDLLDIILTKGGCYGVEQQSCTQVASSPPPFFCGSPPSRVANPLI 116

Query: 741  QDARFGEEKXXXXXXXXXXXXXXXXXSTT--------RKGCVRAKFGHKPAAVRIEGFDC 586
            QDARFGEE+                 S++        + GCVRA FG+KP AVR+EGFDC
Sbjct: 117  QDARFGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKP-AVRVEGFDC 175

Query: 585  LDRDRRNCSIPAVA 544
            LDRDRR+CSIPA+A
Sbjct: 176  LDRDRRSCSIPALA 189


>gb|ABW74476.1| unknown [Paeonia suffruticosa]
          Length = 183

 Score =  152 bits (385), Expect = 1e-34
 Identities = 90/188 (47%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
 Frame = -3

Query: 1092 MTQCVYQQNALAAACEEMKXXXXXXXXXXNDRRDFVVCPKPRRLGVLNHSMNDPIRTLRW 913
            M  C  QQ  + AA EEM+           DRRD VVCPKPRR+G+L+ +++DPIR LRW
Sbjct: 1    MNHCAIQQQNVYAAREEMRSPVSIPMS---DRRDSVVCPKPRRMGLLDSTISDPIRPLRW 57

Query: 912  QLS-HQVEVNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXSRATNPLIQD 736
             LS HQ E ++S+AG DL+++ILSKGG   EQS    +A           SR  NP++ D
Sbjct: 58   HLSHHQSEYSDSRAGTDLLDIILSKGGYSVEQS-GNQLASSPPFFSGSPPSRVANPVVLD 116

Query: 735  ARFGEEKXXXXXXXXXXXXXXXXXSTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRR 568
            ARFG+EK                 S +    + GC+RA +G KP  VRIEGFDCLDRDRR
Sbjct: 117  ARFGDEKITPSAPLQPLLSPGPSSSPSSSARKGGCLRANYGSKP-VVRIEGFDCLDRDRR 175

Query: 567  NCSIPAVA 544
            NCSIPA+A
Sbjct: 176  NCSIPALA 183


>gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasiliensis]
          Length = 176

 Score =  151 bits (382), Expect = 2e-34
 Identities = 88/184 (47%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
 Frame = -3

Query: 1092 MTQCVYQQNALAAACEEMKXXXXXXXXXXNDRRDFVVCPKPRRLGVLNHSMNDPIRTLRW 913
            M Q    +NA+A+ C++ +           D +  VVCPKPRR+G+L    N+P R LRW
Sbjct: 1    MNQFNLHKNAIAS-CDQTETRGLVSIF---DSKGPVVCPKPRRVGIL---ANNPSRPLRW 53

Query: 912  QLSHQVEVNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXSRATNPLIQDA 733
             +SHQ E+ +SKAG +L+++IL K G+G EQSA  HVA           +RA NP+IQDA
Sbjct: 54   HMSHQAEMCDSKAGAELLDIILMKDGHGTEQSA-NHVASPLPFFCGSPPTRAANPVIQDA 112

Query: 732  RFGEEKXXXXXXXXXXXXXXXXXSTTRKG-CVRAKFGHKPAAVRIEGFDCLDRDRRNCSI 556
            RFG+EK                  T+RKG CVR KFG KPAAVR+EGFDCL+RDR+N SI
Sbjct: 113  RFGDEKLTPVSPLLIPSPSSLSSPTSRKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSI 172

Query: 555  PAVA 544
            PA+A
Sbjct: 173  PAMA 176


>gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasiliensis]
          Length = 176

 Score =  151 bits (381), Expect = 3e-34
 Identities = 82/154 (53%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = -3

Query: 1002 DRRDFVVCPKPRRLGVLNHSMNDPIRTLRWQLSHQVEVNESKAGVDLMELILSKGGNGAE 823
            D +  VVCPKPRR+G+L    N+P R LRW +SHQ E+ +SKAG +L+++IL K G+G E
Sbjct: 27   DSKGPVVCPKPRRVGIL---ANNPSRPLRWHMSHQAEMCDSKAGAELLDIILMKDGHGTE 83

Query: 822  QSAATHVAXXXXXXXXXXXSRATNPLIQDARFGEEKXXXXXXXXXXXXXXXXXSTTRKG- 646
            QSA  HVA           +RA NP+IQDARFG+EK                  T+RKG 
Sbjct: 84   QSA-NHVASPLPFFCGSPPTRAANPVIQDARFGDEKLTPVSPLLIPSPSSLSSPTSRKGG 142

Query: 645  CVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 544
            CVR KFG KPAAVR+EGFDCL+RDR+N SIPA+A
Sbjct: 143  CVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 176


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