BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002281
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   529   e-148
emb|CBI16803.3| unnamed protein product [Vitis vinifera]              529   e-148
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu...   521   e-145
ref|XP_002441617.1| hypothetical protein SORBIDRAFT_09g030450 [S...   515   e-143
dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]    513   e-143

>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
            vinifera]
          Length = 713

 Score =  529 bits (1363), Expect = e-148
 Identities = 260/336 (77%), Positives = 297/336 (88%)
 Frame = +1

Query: 4    YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 183
            YN  TG+ESL+IV TSKAQALQRSGRAGRE PGKCFRLYPESEF +L +ST PEIKRCNL
Sbjct: 379  YNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEFGQLADSTEPEIKRCNL 438

Query: 184  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 363
            SNVILQLKALGVDD++GFDF+EKPSR+AIVK+LE LFLLGA+T+DSKL+ P+GHQMARLP
Sbjct: 439  SNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITDDSKLSDPIGHQMARLP 498

Query: 364  LDPIYAKALIVASEFSCVEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 543
            LDP+Y+KALI+AS+F+C+EEMLIAVAMLSVESIFYTPREKL+EAR A K FSS EGDH+T
Sbjct: 499  LDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTPREKLEEARTAMKCFSSPEGDHIT 558

Query: 544  LVNVFRSSAEFLEKRKMSGSKDKSAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 723
            L+NV+R+S EF+EK K    K+K+ E+ L KWCK+NFIN RSLRHARD+HSQIR H EQM
Sbjct: 559  LINVYRASDEFVEKIKQGNDKEKT-EKKLRKWCKENFINSRSLRHARDIHSQIRRHAEQM 617

Query: 724  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIVRIHPSSVLFRTKAECI 903
            GL + SCGD+++QFRRCL ASFFLNAA KQP+G+YR  A GQ VRIHPSSVLFRTK ECI
Sbjct: 618  GLCVASCGDDMLQFRRCLAASFFLNAALKQPEGTYRALASGQSVRIHPSSVLFRTKPECI 677

Query: 904  IFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 1011
            IFNELV+TN  YIRNIT ID LWLPELAPQYYA QN
Sbjct: 678  IFNELVQTNHCYIRNITRIDFLWLPELAPQYYAVQN 713


>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score =  529 bits (1363), Expect = e-148
 Identities = 260/336 (77%), Positives = 297/336 (88%)
 Frame = +1

Query: 4    YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 183
            YN  TG+ESL+IV TSKAQALQRSGRAGRE PGKCFRLYPESEF +L +ST PEIKRCNL
Sbjct: 1074 YNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEFGQLADSTEPEIKRCNL 1133

Query: 184  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 363
            SNVILQLKALGVDD++GFDF+EKPSR+AIVK+LE LFLLGA+T+DSKL+ P+GHQMARLP
Sbjct: 1134 SNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITDDSKLSDPIGHQMARLP 1193

Query: 364  LDPIYAKALIVASEFSCVEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 543
            LDP+Y+KALI+AS+F+C+EEMLIAVAMLSVESIFYTPREKL+EAR A K FSS EGDH+T
Sbjct: 1194 LDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTPREKLEEARTAMKCFSSPEGDHIT 1253

Query: 544  LVNVFRSSAEFLEKRKMSGSKDKSAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 723
            L+NV+R+S EF+EK K    K+K+ E+ L KWCK+NFIN RSLRHARD+HSQIR H EQM
Sbjct: 1254 LINVYRASDEFVEKIKQGNDKEKT-EKKLRKWCKENFINSRSLRHARDIHSQIRRHAEQM 1312

Query: 724  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIVRIHPSSVLFRTKAECI 903
            GL + SCGD+++QFRRCL ASFFLNAA KQP+G+YR  A GQ VRIHPSSVLFRTK ECI
Sbjct: 1313 GLCVASCGDDMLQFRRCLAASFFLNAALKQPEGTYRALASGQSVRIHPSSVLFRTKPECI 1372

Query: 904  IFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 1011
            IFNELV+TN  YIRNIT ID LWLPELAPQYYA QN
Sbjct: 1373 IFNELVQTNHCYIRNITRIDFLWLPELAPQYYAVQN 1408


>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 690

 Score =  521 bits (1341), Expect = e-145
 Identities = 255/340 (75%), Positives = 297/340 (87%), Gaps = 4/340 (1%)
 Frame = +1

Query: 4    YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 183
            Y+P  GMESL +VPTSKAQALQRSGRAGREGPGKCFRLYPE EF KL +ST PEIKRCNL
Sbjct: 351  YDPVKGMESLVVVPTSKAQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTKPEIKRCNL 410

Query: 184  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 363
            SNVILQLKALGVDD++GFDF+EKPSR AI+K+LEHLFLLGALT++ KL+ PVGHQMARLP
Sbjct: 411  SNVILQLKALGVDDIIGFDFIEKPSRAAIIKSLEHLFLLGALTDECKLSDPVGHQMARLP 470

Query: 364  LDPIYAKALIVASEFSCVEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 543
            LDPIY+KALI+AS+F+C+EEMLI VAMLSVESIFY PREK +E+R A K FSS +GDHLT
Sbjct: 471  LDPIYSKALILASQFNCLEEMLITVAMLSVESIFYAPREKSEESRTAMKCFSSPDGDHLT 530

Query: 544  LVNVFRSSAEFLEKRKMSGSKDKS----AERSLGKWCKDNFINGRSLRHARDVHSQIRGH 711
            L++V+R++ E LEKRKM  + +K+     E+ L KWCK+NFINGRSLRHARD+HSQIRGH
Sbjct: 531  LISVYRAADELLEKRKMELNNEKNFKGKGEKILRKWCKENFINGRSLRHARDIHSQIRGH 590

Query: 712  VEQMGLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIVRIHPSSVLFRTK 891
            VEQMGLR++SCGD+++QFRRCL ASFFLNAA KQPDG+YR  A GQ V+IHP SVLFR+K
Sbjct: 591  VEQMGLRVSSCGDDMLQFRRCLAASFFLNAALKQPDGTYRALASGQTVQIHPFSVLFRSK 650

Query: 892  AECIIFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 1011
            AEC+IFNELV+T+  YIRNIT ID LWL ELAP YYA Q+
Sbjct: 651  AECVIFNELVQTSKKYIRNITRIDYLWLTELAPHYYAMQS 690


>ref|XP_002441617.1| hypothetical protein SORBIDRAFT_09g030450 [Sorghum bicolor]
            gi|241946902|gb|EES20047.1| hypothetical protein
            SORBIDRAFT_09g030450 [Sorghum bicolor]
          Length = 485

 Score =  515 bits (1326), Expect = e-143
 Identities = 246/335 (73%), Positives = 296/335 (88%)
 Frame = +1

Query: 4    YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 183
            YNP TGMESL I+P SKAQALQRSGRAGREGPGKCFRL+ ESEF KLV+STVPEIKRCNL
Sbjct: 150  YNPVTGMESLIIIPVSKAQALQRSGRAGREGPGKCFRLFQESEFDKLVDSTVPEIKRCNL 209

Query: 184  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 363
            SNV+LQLKALG+DD++GFDFMEKPSR AI+K+LE L LLGALT+D KL+ PVGHQMARLP
Sbjct: 210  SNVVLQLKALGIDDIIGFDFMEKPSRTAILKSLEQLILLGALTDDYKLSDPVGHQMARLP 269

Query: 364  LDPIYAKALIVASEFSCVEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 543
            LDP+Y+KALIVAS+F C+EEMLI V+MLSVESIF++ REKL+EAR ARK F S EGDH+T
Sbjct: 270  LDPMYSKALIVASKFKCLEEMLIVVSMLSVESIFFSVREKLEEARAARKGFESAEGDHIT 329

Query: 544  LVNVFRSSAEFLEKRKMSGSKDKSAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 723
            LVNV+R++AE LEK + + +K+K+ E++L +WC++NFIN RSLRHARDVHSQI+GH +QM
Sbjct: 330  LVNVYRAAAECLEKSRNANAKEKTMEKALNRWCRENFINYRSLRHARDVHSQIQGHAQQM 389

Query: 724  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIVRIHPSSVLFRTKAECI 903
            GL ++SCGD++V FRRCLT++FFLNAA +QPDGSYR  A GQ V+IHPSSVLFRTK +C+
Sbjct: 390  GLNLSSCGDDMVLFRRCLTSAFFLNAAMRQPDGSYRALATGQSVQIHPSSVLFRTKPDCV 449

Query: 904  IFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQ 1008
            IFNELVRT  +Y++N+T ID LWL ELAPQYYA +
Sbjct: 450  IFNELVRTTQNYVKNLTRIDPLWLAELAPQYYATE 484


>dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  513 bits (1321), Expect = e-143
 Identities = 245/336 (72%), Positives = 296/336 (88%)
 Frame = +1

Query: 4    YNPRTGMESLNIVPTSKAQALQRSGRAGREGPGKCFRLYPESEFSKLVESTVPEIKRCNL 183
            YNP TGMESL I+P SKAQALQRSGRAGREGPGKCFRL+ E EF KL EST+PEIKRCNL
Sbjct: 362  YNPVTGMESLIIIPVSKAQALQRSGRAGREGPGKCFRLFQECEFDKLAESTIPEIKRCNL 421

Query: 184  SNVILQLKALGVDDVVGFDFMEKPSRIAIVKALEHLFLLGALTEDSKLTSPVGHQMARLP 363
            +NV+LQLKALG+DD++GFDFMEKP R +I+K+LE L LLGALT+D KL+ PVG QMARLP
Sbjct: 422  ANVVLQLKALGIDDIIGFDFMEKPLRTSILKSLEQLILLGALTDDYKLSDPVGKQMARLP 481

Query: 364  LDPIYAKALIVASEFSCVEEMLIAVAMLSVESIFYTPREKLDEARNARKSFSSLEGDHLT 543
            LDP+Y+KALIV+SEF C+EEMLI V+MLSVESIF+TPREKL+EAR ARKSF S EGDH+T
Sbjct: 482  LDPMYSKALIVSSEFKCLEEMLIVVSMLSVESIFFTPREKLEEARAARKSFESSEGDHIT 541

Query: 544  LVNVFRSSAEFLEKRKMSGSKDKSAERSLGKWCKDNFINGRSLRHARDVHSQIRGHVEQM 723
            LVNV+R++AE LEK K + +K+K+ E++L +WC +NFIN RSLRHARDVHSQI+GHV+QM
Sbjct: 542  LVNVYRAAAECLEKSKNANAKEKTMEKALNRWCFENFINYRSLRHARDVHSQIQGHVQQM 601

Query: 724  GLRITSCGDEIVQFRRCLTASFFLNAASKQPDGSYRVCAGGQIVRIHPSSVLFRTKAECI 903
            GL ++SCGD++VQFRRCLTA+FFLNAA +QPDGS+R  A GQ V++HPSSVLFRTK +C+
Sbjct: 602  GLNLSSCGDDMVQFRRCLTAAFFLNAAMRQPDGSFRALATGQSVQMHPSSVLFRTKPDCV 661

Query: 904  IFNELVRTNDDYIRNITIIDQLWLPELAPQYYAPQN 1011
            IFNELVRT  +Y++N+T ID LWL ELAPQYYA ++
Sbjct: 662  IFNELVRTTQNYVKNLTRIDPLWLAELAPQYYATED 697