BLASTX nr result

ID: Coptis24_contig00002274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002274
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266741.2| PREDICTED: uncharacterized protein LOC100246...   142   4e-32
emb|CAN75747.1| hypothetical protein VITISV_023460 [Vitis vinifera]   134   1e-29
ref|XP_002523213.1| serine-threonine protein kinase, plant-type,...   125   3e-27
ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAF...   124   8e-27
ref|XP_002525575.1| serine-threonine protein kinase, plant-type,...   119   3e-25

>ref|XP_002266741.2| PREDICTED: uncharacterized protein LOC100246128 [Vitis vinifera]
          Length = 672

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/114 (64%), Positives = 91/114 (79%), Gaps = 5/114 (4%)
 Frame = -3

Query: 332 MSTEGQRVVVIQDASKDVSSSAIEWAIHGLSLMPGDKLTLLAVLHQVNNPSTLSFKGAGK 153
           MST  QRVVVIQDAS++VSSSA++WA+ GLSL PGD+LTLL VLHQVN PSTLSF  A K
Sbjct: 1   MSTAAQRVVVIQDASREVSSSAVKWALDGLSLKPGDELTLLGVLHQVNTPSTLSFMRARK 60

Query: 152 LLGYKSRVDS-----INQNIVKEEVARTKEEYHNNAELMKIAELYATEKVEFMI 6
           +LGYKSRVDS      NQ ++  EVAR K+EY N+ E+++I++LY T+KV+F I
Sbjct: 61  MLGYKSRVDSNSMLAANQRMINREVARKKQEYENSKEVLQISKLYDTKKVKFKI 114


>emb|CAN75747.1| hypothetical protein VITISV_023460 [Vitis vinifera]
          Length = 199

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/131 (54%), Positives = 95/131 (72%), Gaps = 5/131 (3%)
 Frame = -3

Query: 383 LH*KAHALKCSPSIRSKMSTEGQRVVVIQDASKDVSSSAIEWAIHGLSLMPGDKLTLLAV 204
           +H +   L+  PS   ++    QRVVVIQDAS++VSSSA++WA+ GLSL PGD+LTLL V
Sbjct: 47  VHHQWQKLQTDPSCPQQL----QRVVVIQDASREVSSSAVKWALDGLSLKPGDELTLLGV 102

Query: 203 LHQVNNPSTLSFKGAGKLLGYKSRVDS-----INQNIVKEEVARTKEEYHNNAELMKIAE 39
           LHQVN PSTLSF    K+LGYKSRVDS      NQ ++  EV R K+EY N+ E+++I++
Sbjct: 103 LHQVNTPSTLSFMRXRKMLGYKSRVDSNSMLAANQRMINREVXRKKQEYENSKEVLQISK 162

Query: 38  LYATEKVEFMI 6
           LY T+KV+F I
Sbjct: 163 LYDTKKVKFKI 173


>ref|XP_002523213.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223537509|gb|EEF39134.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 546

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 5/111 (4%)
 Frame = -3

Query: 323 EGQRVVVIQDASKDVSSSAIEWAIHGLSLMPGDKLTLLAVLHQVNNPSTLSFKGAGKLLG 144
           E QRVVVIQDAS++V SSA+ WA  GLSL PGD LT LAVLHQV+NP    + G+ KLLG
Sbjct: 2   ESQRVVVIQDASREVCSSALRWAFQGLSLKPGDMLTFLAVLHQVDNPCKSPYAGSRKLLG 61

Query: 143 YKSRVDS-----INQNIVKEEVARTKEEYHNNAELMKIAELYATEKVEFMI 6
           YKS+VDS      N+ IV  E AR KEEY  NAEL+++++LY  +KV F I
Sbjct: 62  YKSKVDSNSMFGTNEKIVNREAARKKEEYGKNAELVQVSKLYEMQKVVFKI 112


>ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Vitis
           vinifera]
          Length = 714

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/114 (56%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
 Frame = -3

Query: 332 MSTEGQRVVVIQDASKDVSSSAIEWAIHGLSLMPGDKLTLLAVLHQVNNPSTLSFKGAGK 153
           MS E Q+VVV+QDAS+DVSS AI   +H L+L PGD LTLL VLHQVNNP T SF G  K
Sbjct: 1   MSREAQKVVVVQDASRDVSSRAIIGILHDLTLKPGDDLTLLGVLHQVNNPCTFSFMGGRK 60

Query: 152 LLGYKSRVDS-----INQNIVKEEVARTKEEYHNNAELMKIAELYATEKVEFMI 6
           +LGY+ +VDS     +NQ +++EE+A+ KEEY NNAE+++I +    EK+ F I
Sbjct: 61  ILGYRVKVDSRSIVRVNQKVLQEEIAKKKEEYLNNAEILQICKHCEMEKIGFHI 114


>ref|XP_002525575.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535154|gb|EEF36834.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 726

 Score =  119 bits (297), Expect = 3e-25
 Identities = 63/109 (57%), Positives = 74/109 (67%), Gaps = 5/109 (4%)
 Frame = -3

Query: 317 QRVVVIQDASKDVSSSAIEWAIHGLSLMPGDKLTLLAVLHQVNNPSTLSFKGAGKLLGYK 138
           QRVVVIQDASKDVS SAI W +      PGD L L  VLHQVNNPSTLSF GAGKL+GYK
Sbjct: 8   QRVVVIQDASKDVSPSAIRWLLDNFPFKPGDVLILFGVLHQVNNPSTLSFMGAGKLMGYK 67

Query: 137 SRVDS-----INQNIVKEEVARTKEEYHNNAELMKIAELYATEKVEFMI 6
            +VDS     +N   + EEVAR  +EY  N E+ +IA+    E++EF I
Sbjct: 68  VKVDSSSMVAMNPKFIAEEVARKTDEYSTNVEIKRIAKHCEEEQIEFNI 116


Top