BLASTX nr result
ID: Coptis24_contig00002245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002245
(1229 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi... 190 9e-59
ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT... 177 7e-56
ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom... 177 7e-56
emb|CBI35950.3| unnamed protein product [Vitis vinifera] 182 5e-55
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom... 182 5e-55
>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
gi|223533215|gb|EEF34971.1| Protein SEY1, putative
[Ricinus communis]
Length = 813
Score = 190 bits (483), Expect(2) = 9e-59
Identities = 94/166 (56%), Positives = 122/166 (73%)
Frame = +2
Query: 329 KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 508
+ + DLPAHKVMVATVRC EIANEK+A+ E+W Q+++AVQ+ VSGFGKKLSS
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIANEKYANFTTNEEWHQIEEAVQSGPVSGFGKKLSSTLS 333
Query: 509 TCLSEYDKEATYFDEGVRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKAR 688
T SEYD EA YFDEGVR+ +R +LE K+L+L+QPA+ SML H+RS TLD FK+AF KA
Sbjct: 334 TSFSEYDAEAIYFDEGVRSAKRKQLEEKLLQLVQPAHQSMLGHIRSGTLDKFKEAFDKA- 392
Query: 689 NRNRGETTAVAAYDCMIHFMSVFDEGCTDVDMKEANWDQARAERNL 826
GE + AAY C ++M+VFDEGCTD +++A+WD ++ L
Sbjct: 393 -LAAGEGFSSAAYSCTQYYMTVFDEGCTDAIIEQASWDTSKVRDKL 437
Score = 64.3 bits (155), Expect(2) = 9e-59
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +3
Query: 117 KVSNLRQRIFDCITPGEVTGDRRGVLPASEISFSAQQIWKVIKE 248
+V++LRQR F I PG + GDRRGV+PAS SFSAQQ+WKVIKE
Sbjct: 231 QVASLRQRFFHSIAPGGLAGDRRGVVPASGFSFSAQQMWKVIKE 274
>ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT HAIR DEFECTIVE 3
homolog 1-like [Cucumis sativus]
Length = 818
Score = 177 bits (450), Expect(2) = 7e-56
Identities = 89/166 (53%), Positives = 116/166 (69%)
Frame = +2
Query: 329 KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 508
+ + DLPAHKVMVATVRC EI NEKF A EDW +++ VQ+ V GFGKKLSSI
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIGNEKFTWFASNEDWLSLEEEVQSGPVQGFGKKLSSIID 333
Query: 509 TCLSEYDKEATYFDEGVRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKAR 688
TCLSEYD EAT+FDEGVR+ +R +LE K+L+L+Q A+ S+L H+RS T + FKDAF KA
Sbjct: 334 TCLSEYDAEATFFDEGVRSAKRAQLEEKLLQLVQSAFQSLLGHIRSGTFEKFKDAFDKA- 392
Query: 689 NRNRGETTAVAAYDCMIHFMSVFDEGCTDVDMKEANWDQARAERNL 826
N GE + AA +C +M++FD+ C +++ANWD +R L
Sbjct: 393 -LNEGEGFSSAASNCAQTYMAIFDKECAGAIIEQANWDTSRIRDKL 437
Score = 67.4 bits (163), Expect(2) = 7e-56
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 117 KVSNLRQRIFDCITPGEVTGDRRGVLPASEISFSAQQIWKVIKE 248
+V+NLRQR F I PG + GDRRGV+PAS SFSAQQIWKVIKE
Sbjct: 231 QVANLRQRFFHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKE 274
>ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Cucumis
sativus]
Length = 818
Score = 177 bits (450), Expect(2) = 7e-56
Identities = 89/166 (53%), Positives = 116/166 (69%)
Frame = +2
Query: 329 KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 508
+ + DLPAHKVMVATVRC EI NEKF A EDW +++ VQ+ V GFGKKLSSI
Sbjct: 274 ENKDLDLPAHKVMVATVRCEEIGNEKFTWFASNEDWLSLEEEVQSGPVQGFGKKLSSIID 333
Query: 509 TCLSEYDKEATYFDEGVRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKAR 688
TCLSEYD EAT+FDEGVR+ +R +LE K+L+L+Q A+ S+L H+RS T + FKDAF KA
Sbjct: 334 TCLSEYDAEATFFDEGVRSAKRAQLEEKLLQLVQSAFQSLLGHIRSGTFEKFKDAFDKA- 392
Query: 689 NRNRGETTAVAAYDCMIHFMSVFDEGCTDVDMKEANWDQARAERNL 826
N GE + AA +C +M++FD+ C +++ANWD +R L
Sbjct: 393 -LNEGEGFSSAASNCAQTYMAIFDKECAGAIIEQANWDTSRIRDKL 437
Score = 67.4 bits (163), Expect(2) = 7e-56
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 117 KVSNLRQRIFDCITPGEVTGDRRGVLPASEISFSAQQIWKVIKE 248
+V+NLRQR F I PG + GDRRGV+PAS SFSAQQIWKVIKE
Sbjct: 231 QVANLRQRFFHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKE 274
>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
Length = 1029
Score = 182 bits (463), Expect(2) = 5e-55
Identities = 94/166 (56%), Positives = 117/166 (70%)
Frame = +2
Query: 329 KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 508
+ + DLPAHKVMVATVRC EIANEKFA A E+W Q+++ VQT V GFGKKLS I
Sbjct: 490 ENKDLDLPAHKVMVATVRCEEIANEKFAYFASNEEWCQIEEDVQTGTVPGFGKKLSLIIG 549
Query: 509 TCLSEYDKEATYFDEGVRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKAR 688
+CLS YD EA YFDEGVR+ +R +LEAK+L+L+QPAY ML H+RS TLD FK+AF KA
Sbjct: 550 SCLSGYDAEAIYFDEGVRSAKREQLEAKLLQLVQPAYQLMLGHIRSGTLDKFKEAFDKA- 608
Query: 689 NRNRGETTAVAAYDCMIHFMSVFDEGCTDVDMKEANWDQARAERNL 826
+ GE AVA + C M+ FDE C D +++ANWD ++ L
Sbjct: 609 -LSGGEGFAVATHGCTKAVMTQFDEECADAVIEQANWDTSKVRDKL 653
Score = 59.7 bits (143), Expect(2) = 5e-55
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3
Query: 117 KVSNLRQRIFDCITPGEVTGDRRGVLPASEISFSAQQIWKVIKE 248
+V++L+QR I PG + GDRR V+PAS SFSAQQIWKVIKE
Sbjct: 447 QVASLKQRFHQSIAPGGLAGDRRAVVPASGFSFSAQQIWKVIKE 490
>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
vinifera]
Length = 871
Score = 182 bits (463), Expect(2) = 5e-55
Identities = 94/166 (56%), Positives = 117/166 (70%)
Frame = +2
Query: 329 KGEQADLPAHKVMVATVRCAEIANEKFADLAGKEDWRQVKKAVQTRAVSGFGKKLSSIFQ 508
+ + DLPAHKVMVATVRC EIANEKFA A E+W Q+++ VQT V GFGKKLS I
Sbjct: 332 ENKDLDLPAHKVMVATVRCEEIANEKFAYFASNEEWCQIEEDVQTGTVPGFGKKLSLIIG 391
Query: 509 TCLSEYDKEATYFDEGVRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKAR 688
+CLS YD EA YFDEGVR+ +R +LEAK+L+L+QPAY ML H+RS TLD FK+AF KA
Sbjct: 392 SCLSGYDAEAIYFDEGVRSAKREQLEAKLLQLVQPAYQLMLGHIRSGTLDKFKEAFDKA- 450
Query: 689 NRNRGETTAVAAYDCMIHFMSVFDEGCTDVDMKEANWDQARAERNL 826
+ GE AVA + C M+ FDE C D +++ANWD ++ L
Sbjct: 451 -LSGGEGFAVATHGCTKAVMTQFDEECADAVIEQANWDTSKVRDKL 495
Score = 59.7 bits (143), Expect(2) = 5e-55
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3
Query: 117 KVSNLRQRIFDCITPGEVTGDRRGVLPASEISFSAQQIWKVIKE 248
+V++L+QR I PG + GDRR V+PAS SFSAQQIWKVIKE
Sbjct: 289 QVASLKQRFHQSIAPGGLAGDRRAVVPASGFSFSAQQIWKVIKE 332