BLASTX nr result

ID: Coptis24_contig00002233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002233
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255...   358   1e-96
ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_002516450.1| conserved hypothetical protein [Ricinus comm...   311   2e-82
gb|AFO66525.1| putative Myo28B1 [Brassica napus]                      310   4e-82
ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cuc...   310   6e-82

>ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255893 [Vitis vinifera]
           gi|296081666|emb|CBI20671.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  358 bits (920), Expect = 1e-96
 Identities = 189/321 (58%), Positives = 236/321 (73%), Gaps = 9/321 (2%)
 Frame = +1

Query: 28  MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPSESDDERVVRELAQ 207
           MADK SRGLV+YGDGL   I+PSHTHLH LASRG CGFL L +SPPSE++DER+VRE AQ
Sbjct: 1   MADKPSRGLVLYGDGLARFINPSHTHLHDLASRGICGFLSLSNSPPSETEDERIVREFAQ 60

Query: 208 LLDAYDS---YNIRAAKQSSTSE-SLVQTISERFMGLRAAIFTNDSSVRSFASLLGLTVL 375
           LLD+ ++    N+  A      + SL+ TISERFMG+RAAI  N+SS+ SF   LG TV+
Sbjct: 61  LLDSCEASLGVNVGGATNLECQQKSLMPTISERFMGMRAAIVANNSSLTSFGGTLGFTVM 120

Query: 376 QFDELIMNNNSPREPAV----SGLLKLLGFQGCMALDTCEFDLVFVHIKSGGRCSDLKVD 543
           Q DELI NN+   EP V    S  LKLLGFQ    L+T +FDL+F+HI +G + +  + +
Sbjct: 121 QTDELIKNNHPLSEPPVDVVASESLKLLGFQEGKTLETSQFDLIFMHIGAGEKANG-QTE 179

Query: 544 IAGGEVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLN-LSLQEKANP 720
           I   +VE+INGL+G I++ A+ GSEI +RLH+SLV+SYG +++D D  L+ L  + + N 
Sbjct: 180 IIANDVEYINGLVGRIMQTAEPGSEIGSRLHLSLVMSYGAVSKDDDPSLSVLVTKNENNS 239

Query: 721 DLSLLFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFKEHGANLAI 900
           DLS L PRQSY   G N  D+IRHHCPMLI+QWQ AVTRKD  + F+F++FKEHG NL I
Sbjct: 240 DLSSLSPRQSYTMKGGNPRDNIRHHCPMLIAQWQYAVTRKDMAKTFSFEDFKEHGGNLTI 299

Query: 901 PADRFLHEVAFKLWKAPKYGA 963
           PADRFLHEVAFKLWKAPKYGA
Sbjct: 300 PADRFLHEVAFKLWKAPKYGA 320


>ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|222855481|gb|EEE93028.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  332 bits (851), Expect = 1e-88
 Identities = 179/317 (56%), Positives = 224/317 (70%), Gaps = 5/317 (1%)
 Frame = +1

Query: 28  MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPSESDDERVVRELAQ 207
           MADKASRGLVIYGDGL   I+PSH HLH LAS+  CGFL LP++PPSES+DER+VRE A 
Sbjct: 1   MADKASRGLVIYGDGLASFINPSHAHLHSLASKAFCGFLTLPNAPPSESEDERIVREFAY 60

Query: 208 LLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSFASLLGLTVLQFDE 387
           LLDA ++Y     +  STS   + TISERFMG++AAI TN+  ++SF   LGLTV  F++
Sbjct: 61  LLDACEAY-----QNVSTS---IPTISERFMGMKAAIITNNPGLKSFGGKLGLTVFPFND 112

Query: 388 LIMN----NNSPREPAVSGLLKLLGFQGCMALDTCEFDLVFVHIKSGGRCSDLKVDIAGG 555
           L  N    + S  +     LLKLLGFQ    L+T +FDLVFVH+ +G R +         
Sbjct: 113 LKGNEFSLSGSSTDFVTFELLKLLGFQEGKTLETSQFDLVFVHVGAGERVNAEGHKTIAI 172

Query: 556 EVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLN-LSLQEKANPDLSL 732
           +VE+I+ L+ GI+ +AQ GSEI +RLH+SLV+SYG + E     L+ L+ +++ +P LS 
Sbjct: 173 DVEYIDALVDGIMRIAQPGSEIGSRLHLSLVMSYGYVTEGDGRDLSILTSKDEMDPALSK 232

Query: 733 LFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFKEHGANLAIPADR 912
           LFP QSY   G+   + IR+HCPMLISQWQ AVTR D  E F+FK+FKEHG NL IPADR
Sbjct: 233 LFPLQSYTMKGEKPRNDIRYHCPMLISQWQYAVTRVDMAETFSFKDFKEHGGNLVIPADR 292

Query: 913 FLHEVAFKLWKAPKYGA 963
           FLHEVAFKLWKAPKYGA
Sbjct: 293 FLHEVAFKLWKAPKYGA 309


>ref|XP_002516450.1| conserved hypothetical protein [Ricinus communis]
           gi|223544270|gb|EEF45791.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  311 bits (798), Expect = 2e-82
 Identities = 162/317 (51%), Positives = 219/317 (69%), Gaps = 5/317 (1%)
 Frame = +1

Query: 28  MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPSESDDERVVRELAQ 207
           MADK SR LV+YGDGL  LI  SHTH+H LAS+ +CGFL LP++P SES++ER+VRE A 
Sbjct: 1   MADKPSRALVLYGDGLAQLIDESHTHIHSLASKASCGFLSLPNAPSSESENERIVREFAH 60

Query: 208 LLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSFASLLGLTVLQFDE 387
           L+DAYD+Y     + S+   +L+ TIS+RFM ++AAI T++ S++SF S LG TVL F  
Sbjct: 61  LVDAYDAYQ----EMSNEKCTLIPTISQRFMEMKAAIITDNPSLQSFGSKLGFTVLSFKC 116

Query: 388 LIMNNNSPREPA----VSGLLKLLGFQGCMALDTCEFDLVFVHIKSGGRCSDLKVDIAGG 555
           L   + S  E +     S LLKLLGFQ    ++  +FDLV +H  +    +    +    
Sbjct: 117 LNGTHKSHYESSFEDLTSELLKLLGFQEGKTIEASQFDLVILHTGASELLNSDSSEATEC 176

Query: 556 EVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAE-DKDSVLNLSLQEKANPDLSL 732
           +  ++N ++   +  A+ GSEI +RLH+SLV+SYG  ++ D  ++  L  +++ N DLS+
Sbjct: 177 DAHYLNSMVKETMYNAKPGSEIGSRLHLSLVMSYGNASKIDSTNLSVLVSKDEMNSDLSV 236

Query: 733 LFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFKEHGANLAIPADR 912
           L PRQSY   G+   D++RHHCPMLI+QWQ AVTRKDT E +++KEFKEHG NL IPADR
Sbjct: 237 LVPRQSYTMKGEKLRDNVRHHCPMLIAQWQHAVTRKDTAETYSYKEFKEHGVNLVIPADR 296

Query: 913 FLHEVAFKLWKAPKYGA 963
           F+HEVAFKLWKAPKYGA
Sbjct: 297 FIHEVAFKLWKAPKYGA 313


>gb|AFO66525.1| putative Myo28B1 [Brassica napus]
          Length = 303

 Score =  310 bits (795), Expect = 4e-82
 Identities = 159/316 (50%), Positives = 216/316 (68%), Gaps = 4/316 (1%)
 Frame = +1

Query: 28  MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPSESDDERVVRELAQ 207
           MADK SR LV+YGDG    + PS+TH+H LAS GTCGFL LPH+PP+E++DER+VRE A 
Sbjct: 1   MADKPSRALVLYGDGSARSVDPSNTHIHSLASVGTCGFLSLPHAPPAETEDERIVREFAH 60

Query: 208 LLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSFASLLGLTVLQFDE 387
           LLDA ++Y+I +  ++  SE+ + T+SERFMG++AA+ T+ SS+ SF  L+GL VLQ +E
Sbjct: 61  LLDASEAYSIASGLKAKGSENEISTLSERFMGIKAALVTDSSSLTSFGKLIGLDVLQLNE 120

Query: 388 LIMNNNS--PREPAVSGLLKLLGFQGCMALDTCEFDLVFVHIKSGGRCSDLKVDIAGGEV 561
           +   ++   P +   + LL+LLGF+G   LD   +D VFVH             I G  V
Sbjct: 121 IHQKSDDSFPSDATATELLRLLGFEGGKCLDMSLYDSVFVH-------------IGGDNV 167

Query: 562 EFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLNL--SLQEKANPDLSLL 735
             IN LIG I+ ++Q GSEI+ RLH+SLV+SYG++ +   S  N+  + QE  NP    L
Sbjct: 168 RTINSLIGSIMRMSQPGSEIAPRLHLSLVLSYGSVTDKDVSDFNVKKTPQEGINPAFQGL 227

Query: 736 FPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFKEHGANLAIPADRF 915
            PRQSY   G+ + D++R +CPML++QWQ+AVTRKD  +  +F+  K+   NL IPADRF
Sbjct: 228 VPRQSYTMRGEKTRDNVRDYCPMLVAQWQDAVTRKDLVDTLSFEALKKLSGNLVIPADRF 287

Query: 916 LHEVAFKLWKAPKYGA 963
           +HEVAFKLWKAPKYGA
Sbjct: 288 IHEVAFKLWKAPKYGA 303


>ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cucumis sativus]
          Length = 315

 Score =  310 bits (793), Expect = 6e-82
 Identities = 165/316 (52%), Positives = 217/316 (68%), Gaps = 4/316 (1%)
 Frame = +1

Query: 28  MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPSESDDERVVRELAQ 207
           MADK SR L ++GDGL   +  SH++LH LAS  +CGFL LP++PPSES+++R++REL  
Sbjct: 1   MADKPSRALAVFGDGLARFLDQSHSNLHALASLASCGFLSLPNAPPSESEEKRMIRELEL 60

Query: 208 LLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSFASLLGLTVLQFDE 387
           L DA DS ++          S  ++I ERFMG+RAA+ TN+S V+S  S LG+++L+ DE
Sbjct: 61  LFDASDS-DVNKNGGGCEGSSQKKSIPERFMGMRAALLTNNSVVQSLGSELGISLLRLDE 119

Query: 388 LIMNNNSPREPA---VSGLLKLLGFQGCMALDTCEFDLVFVHIKSGGRCSDLKVDIAGGE 558
           L+  N+    P     S LLK LGFQ     D  EFDL+FVHI  G + +  K   A  E
Sbjct: 120 LMQMNHLGLPPVDFLASELLKRLGFQDGKIQDASEFDLLFVHIGVGDKVNGEKDRTASDE 179

Query: 559 VEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLN-LSLQEKANPDLSLL 735
           +++I+ L+G IL+  Q GSEI +RLH+SL++SYG + ED ++ L+ L+     N DLS+L
Sbjct: 180 MKYIDALVGDILQKTQPGSEIGSRLHLSLLMSYGDVFEDDENSLSVLTSNCGKNSDLSVL 239

Query: 736 FPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFKEHGANLAIPADRF 915
           FPRQSY   G+   + IRHH PML +QWQ  VTRKD  E F+FKEFKEHG+NL IPADRF
Sbjct: 240 FPRQSYTMMGEVQRNDIRHHSPMLAAQWQYGVTRKDKAETFSFKEFKEHGSNLVIPADRF 299

Query: 916 LHEVAFKLWKAPKYGA 963
           +HEVAFKLWKAPKYGA
Sbjct: 300 IHEVAFKLWKAPKYGA 315


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