BLASTX nr result

ID: Coptis24_contig00002228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002228
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525427.1| glutamate dehydrogenase, putative [Ricinus c...   619   e-175
gb|ABR45723.1| GDH1 [Actinidia chinensis]                             614   e-173
ref|XP_002319162.1| predicted protein [Populus trichocarpa] gi|2...   613   e-173
ref|NP_001239645.1| uncharacterized protein LOC100789509 [Glycin...   612   e-173
ref|XP_003632715.1| PREDICTED: glutamate dehydrogenase 1 [Vitis ...   612   e-173

>ref|XP_002525427.1| glutamate dehydrogenase, putative [Ricinus communis]
           gi|223535240|gb|EEF36917.1| glutamate dehydrogenase,
           putative [Ricinus communis]
          Length = 411

 Score =  619 bits (1595), Expect = e-175
 Identities = 299/327 (91%), Positives = 319/327 (97%)
 Frame = -2

Query: 982 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 803
           MNALVAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1   MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 802 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 623
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PG+LSISELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERL 120

Query: 622 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 443
           TRVFTQKIHDLIG+HTDVPAPDMGT PQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 442 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 263
           RDAATGRGVLFATEALL E GKSISGQRFVIQGFGNVGSWAAQLI+E+GGK+VA+SD+TG
Sbjct: 181 RDAATGRGVLFATEALLNERGKSISGQRFVIQGFGNVGSWAAQLINEQGGKVVAVSDITG 240

Query: 262 AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 83
           AIKN NGIDIPSL+KH+KEN+GVKGFHGGD IDP SILVEDCD+LIPAALGGVINR+NAN
Sbjct: 241 AIKNKNGIDIPSLLKHTKENKGVKGFHGGDPIDPNSILVEDCDILIPAALGGVINRENAN 300

Query: 82  EIRAKFIIEAANHPADPEADEILSKKG 2
           EI+AKFIIEAANHP DPEADEILSKKG
Sbjct: 301 EIKAKFIIEAANHPTDPEADEILSKKG 327


>gb|ABR45723.1| GDH1 [Actinidia chinensis]
          Length = 411

 Score =  614 bits (1584), Expect = e-173
 Identities = 297/327 (90%), Positives = 317/327 (96%)
 Frame = -2

Query: 982 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 803
           MNAL AT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1   MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 802 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 623
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGCDPGELSISELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCDPGELSISELERL 120

Query: 622 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 443
           TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKP DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPTDLGGSLG 180

Query: 442 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 263
           RDAATGRGVLFATEALL E+GKSI+GQRFVIQGFGNVGSWAAQLISE GGK+VA SD+TG
Sbjct: 181 RDAATGRGVLFATEALLHEHGKSIAGQRFVIQGFGNVGSWAAQLISEIGGKVVAASDITG 240

Query: 262 AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 83
           A+KNS G+DIPSL+KH KENRGVKGFHGGD IDP++ILVE+CD+LIPAALGGVINR+NAN
Sbjct: 241 AVKNSKGLDIPSLLKHVKENRGVKGFHGGDPIDPSAILVEECDILIPAALGGVINRENAN 300

Query: 82  EIRAKFIIEAANHPADPEADEILSKKG 2
           +I+AKFIIEAANHP DPEADEIL+KKG
Sbjct: 301 DIKAKFIIEAANHPTDPEADEILAKKG 327


>ref|XP_002319162.1| predicted protein [Populus trichocarpa] gi|222857538|gb|EEE95085.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  613 bits (1582), Expect = e-173
 Identities = 296/327 (90%), Positives = 319/327 (97%)
 Frame = -2

Query: 982 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 803
           MNALVAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1   MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 802 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 623
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PGELS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSVSELERL 120

Query: 622 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 443
           TRVFTQKIHDLIG+HTDVPAPDMGT PQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 442 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 263
           RDAATG+GVLFATEALL E+GK+ISGQRFVIQGFGNVG+WAAQLISE+GGKIVAISD+TG
Sbjct: 181 RDAATGQGVLFATEALLNEHGKTISGQRFVIQGFGNVGAWAAQLISEQGGKIVAISDITG 240

Query: 262 AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 83
           A+KNS GIDIPSL+KH+KE+ GVKGFHGGD IDP SILVEDCD+LIPAALGGVINR+NAN
Sbjct: 241 AMKNSKGIDIPSLLKHAKEHNGVKGFHGGDPIDPKSILVEDCDILIPAALGGVINRENAN 300

Query: 82  EIRAKFIIEAANHPADPEADEILSKKG 2
           +I+AKFIIEAANHP DPEADEILSKKG
Sbjct: 301 DIKAKFIIEAANHPTDPEADEILSKKG 327


>ref|NP_001239645.1| uncharacterized protein LOC100789509 [Glycine max]
           gi|255639495|gb|ACU20042.1| unknown [Glycine max]
          Length = 411

 Score =  612 bits (1578), Expect = e-173
 Identities = 294/327 (89%), Positives = 315/327 (96%)
 Frame = -2

Query: 982 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 803
           MNAL AT+RNFK A++LLGLDSKLEKSLLIPFREIKVECTIPKDDG+L S+VGFR+QHDN
Sbjct: 1   MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRVQHDN 60

Query: 802 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 623
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGCDP ELSISELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCDPAELSISELERL 120

Query: 622 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 443
           TRVFTQKIHDLIG HTDVPAPDMGT PQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 442 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 263
           RDAATGRGVLFATEALL EYGKS+SGQRFVIQGFGNVGSWAAQLISEKGGK+VA+SD+TG
Sbjct: 181 RDAATGRGVLFATEALLNEYGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDITG 240

Query: 262 AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 83
           AIKNSNG+DIP+L++HSK +RGVKGFHGGD IDP SILVEDCDVL+PAALGGVINR+NAN
Sbjct: 241 AIKNSNGLDIPNLLEHSKGHRGVKGFHGGDPIDPNSILVEDCDVLVPAALGGVINRENAN 300

Query: 82  EIRAKFIIEAANHPADPEADEILSKKG 2
           EI+AKFI+EAANHP DPEADEIL KKG
Sbjct: 301 EIKAKFIVEAANHPTDPEADEILKKKG 327


>ref|XP_003632715.1| PREDICTED: glutamate dehydrogenase 1 [Vitis vinifera]
           gi|297739760|emb|CBI29942.3| unnamed protein product
           [Vitis vinifera]
          Length = 411

 Score =  612 bits (1578), Expect = e-173
 Identities = 300/327 (91%), Positives = 317/327 (96%)
 Frame = -2

Query: 982 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 803
           MNALVAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1   MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 802 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 623
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PGELS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSLSELERL 120

Query: 622 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 443
           TRVFTQKIHDLIGV TDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGVSTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 442 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 263
           RDAATGRGVLFATEALL E+GKSI+GQRFVIQGFGNVGSWAAQLISE GGKIVA+SD+TG
Sbjct: 181 RDAATGRGVLFATEALLHEHGKSIAGQRFVIQGFGNVGSWAAQLISEHGGKIVAVSDITG 240

Query: 262 AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 83
           AIKNS GIDIPSL+KHS E+RGVKGF+G D IDP SILVEDCDVLIPAALGGVINR+NAN
Sbjct: 241 AIKNSKGIDIPSLLKHSVEHRGVKGFNGADPIDPKSILVEDCDVLIPAALGGVINRENAN 300

Query: 82  EIRAKFIIEAANHPADPEADEILSKKG 2
           EI+AKFIIEAANHP DPEADEILSKKG
Sbjct: 301 EIKAKFIIEAANHPTDPEADEILSKKG 327


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