BLASTX nr result

ID: Coptis24_contig00002221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002221
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [C...   147   9e-34
gb|ACT83792.1| putative elongation factor 1 alpha [Lemna minor]       147   9e-34
ref|XP_002284964.1| PREDICTED: elongation factor 1-alpha-like [V...   147   1e-33
gb|AAX54511.1| elongation factor 1 alpha [Actinidia deliciosa]        146   2e-33
gb|AAM94339.1| elongation factor 1-alpha [Striga hermonthica]         146   2e-33

>ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus]
           gi|449505290|ref|XP_004162426.1| PREDICTED: elongation
           factor 1-alpha-like [Cucumis sativus]
          Length = 447

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLPL 182
           KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRP+DKPLRLPL
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPSDKPLRLPL 238

Query: 183 QDVYKIGGIG 212
           QDVYKIGGIG
Sbjct: 239 QDVYKIGGIG 248


>gb|ACT83792.1| putative elongation factor 1 alpha [Lemna minor]
          Length = 155

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLPL 182
           KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRP+DKPLRLPL
Sbjct: 51  KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPSDKPLRLPL 110

Query: 183 QDVYKIGGIG 212
           QDVYKIGGIG
Sbjct: 111 QDVYKIGGIG 120


>ref|XP_002284964.1| PREDICTED: elongation factor 1-alpha-like [Vitis vinifera]
           gi|225435241|ref|XP_002284924.1| PREDICTED: elongation
           factor 1-alpha-like [Vitis vinifera]
           gi|147841303|emb|CAN64511.1| hypothetical protein
           VITISV_035691 [Vitis vinifera]
          Length = 447

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLPL 182
           KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALD+I+EPKRPTDKPLRLPL
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMINEPKRPTDKPLRLPL 238

Query: 183 QDVYKIGGIG 212
           QDVYKIGGIG
Sbjct: 239 QDVYKIGGIG 248


>gb|AAX54511.1| elongation factor 1 alpha [Actinidia deliciosa]
          Length = 447

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLPL 182
           KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDLISEPKRP+DKPLRLPL
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLISEPKRPSDKPLRLPL 238

Query: 183 QDVYKIGGIG 212
           QDVYKIGGIG
Sbjct: 239 QDVYKIGGIG 248


>gb|AAM94339.1| elongation factor 1-alpha [Striga hermonthica]
          Length = 150

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLPL 182
           KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLI+EPKRP+DKPLRLPL
Sbjct: 45  KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPL 104

Query: 183 QDVYKIGGIG 212
           QDVYKIGGIG
Sbjct: 105 QDVYKIGGIG 114


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