BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002220
         (1565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin...   655   0.0  
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici...   642   0.0  
ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|2...   610   e-172
ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2...   608   e-171
ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin...   606   e-171

>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 1 [Vitis vinifera]
          Length = 441

 Score =  655 bits (1691), Expect = 0.0
 Identities = 317/443 (71%), Positives = 355/443 (80%), Gaps = 17/443 (3%)
 Frame = +2

Query: 17   MEYDGGIPPI--SVTEGSSLSSPLDEDAMWEMNMRGNESMESRQYPERPGEQDCTYYIRT 190
            ME+D GIP     VTEGSSLS  L++DAMW+MN+R +E+MES  YPERPGE DC+YYIRT
Sbjct: 1    MEFDAGIPMPRGQVTEGSSLSPSLNQDAMWQMNLRSSETMESGPYPERPGEPDCSYYIRT 60

Query: 191  GLCRFGMTCRFNHPPNRKLAVAAARIKGVYPERIGQPECQYYLKTGTCKFGATCKFHHPR 370
            GLCRFG+TCRFNHPPNRKLA+A AR+KG +PER+GQPECQYYLKTGTCKFGATCKFHHPR
Sbjct: 61   GLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHHPR 120

Query: 371  DKAGIAGRVVLNILGYPLRPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVY 550
            DKAGIAGRV LNILGYPLRP+E +CAYYLRTGQCKFG+TCKFHHPQPS+ MVSLRGSPVY
Sbjct: 121  DKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVY 180

Query: 551  PPVHSPSTPGQQSYQ-GVTNWALSRTSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTG 727
            P V SP+TPGQQSY  G+TNW LSR SFIPSPRWQ PSSY  ++LPQGVV VP WNAY+G
Sbjct: 181  PSVPSPTTPGQQSYAGGITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYSG 240

Query: 728  QIGSISSSERQQQTPGNNQYYGTPRQSQTSHEVQ--------------GLYNLQRDNVFP 865
            Q+G  S SE QQQT GNNQ YGT RQS+  +                 G Y LQR+NVFP
Sbjct: 241  QLG--SPSESQQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFP 298

Query: 866  ERPGQPECQFYMKTGDCKYGTVCRFHHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRY 1045
            ERPGQPECQFYMKTGDCK+G VCRFHHPRERLIP P+C               CIFYSRY
Sbjct: 299  ERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRY 358

Query: 1046 GICKFGPNCKFDHPMGPYAYNLSSSASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGK 1225
            GICKFGP+CKFDHPMG +AYNLS+S+SAD PVVRRLLGSSSG +A+ LS +G VEA S K
Sbjct: 359  GICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLLGSSSGSAALTLSSDGLVEAGSTK 418

Query: 1226 SR*LSLAVTQQMPSGAENIDGDG 1294
             R LSL  T+QMP G +NID +G
Sbjct: 419  PRRLSLPETRQMPPGDDNIDTEG 441


>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223548588|gb|EEF50079.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 448

 Score =  642 bits (1657), Expect = 0.0
 Identities = 314/452 (69%), Positives = 354/452 (78%), Gaps = 26/452 (5%)
 Frame = +2

Query: 17   MEYDGGIP-----------PISVTEGSSLSSPLDEDAMWEMNMRGNESMESRQYPERPGE 163
            M++D GIP           P+ VTE  SLS+ L+EDAMW+MN+R +E+M+S  YPE PGE
Sbjct: 1    MDFDAGIPMSRTAPPPPPPPLPVTEDPSLSASLNEDAMWQMNLRSSETMDSGPYPEHPGE 60

Query: 164  QDCTYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGVYPERIGQPECQYYLKTGTCKFG 343
             DC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+KG +PERIGQPECQYYLKTGTCKFG
Sbjct: 61   PDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFG 120

Query: 344  ATCKFHHPRDKAGIAGRVVLNILGYPLRPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAM 523
            ATCKFHHP+DKAGIAGRV LNILGYPLRPNE ECAYYLRTGQCKFG+TCKFHHPQP+N M
Sbjct: 121  ATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNVM 180

Query: 524  VSLRGSPVYPPVHSPSTPGQQSYQ-GVTNWALSRTSFIPSPRWQGPSSYTQVILPQGVVP 700
            V LRGSPVYP V SP+TPGQQSY  GVTNW  SR SFI SPRWQ PSSYT +ILPQGVV 
Sbjct: 181  VPLRGSPVYPTVQSPTTPGQQSYTGGVTNW--SRASFITSPRWQAPSSYTPLILPQGVVS 238

Query: 701  VPSWNAYTGQIGSISSSERQQQTPGNNQYYGTPRQSQTSHEVQ--------------GLY 838
            VP WNAY+GQ+GS+SS E QQQT GN+Q YGT RQS++ +                 G Y
Sbjct: 239  VPGWNAYSGQLGSVSSPEGQQQT-GNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFY 297

Query: 839  NLQRDNVFPERPGQPECQFYMKTGDCKYGTVCRFHHPRERLIPVPNCXXXXXXXXXXXXX 1018
             LQRDNVFPERPGQPECQFYMKTGDCK+G VCRFHHPRERLIP P+C             
Sbjct: 298  ALQRDNVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGE 357

Query: 1019 XXCIFYSRYGICKFGPNCKFDHPMGPYAYNLSSSASADIPVVRRLLGSSSGISAVPLSLE 1198
              CIFYSRYG+CKFGP+CKFDHPMG + YNLS+ +SAD P VRRLLGSSSG +A+ LS E
Sbjct: 358  PLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSADAP-VRRLLGSSSGSAALTLSTE 416

Query: 1199 GPVEAVSGKSR*LSLAVTQQMPSGAENIDGDG 1294
            G V+A S K R LSL+  +QMPSG +NID +G
Sbjct: 417  GLVDAGSTKPRRLSLSEPRQMPSGDDNIDTEG 448


>ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|222862776|gb|EEF00283.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  610 bits (1573), Expect = e-172
 Identities = 294/418 (70%), Positives = 333/418 (79%), Gaps = 16/418 (3%)
 Frame = +2

Query: 89   DAMWEMNMRGNESMESRQYPERPGEQDCTYYIRTGLCRFGMTCRFNHPPNRKLAVAAARI 268
            DAMW+MN+R +E+ME+  YPERPGE DC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+
Sbjct: 1    DAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIAAARM 60

Query: 269  KGVYPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVVLNILGYPLRPNEKECA 448
            KG +PERIGQPECQYYLKTGTCKFGATCKFHHPRDKAG++GRV LNILGYPLR NE ECA
Sbjct: 61   KGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLRLNEMECA 120

Query: 449  YYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVYPPVHSPSTPGQQSYQG--VTNWALSR 622
            YYLRTGQCKFG+TCKFHHPQP+N MV LRGSPVYP V+SP+TPGQQSY G   TNW  SR
Sbjct: 121  YYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVNSPTTPGQQSYPGGLATNW--SR 178

Query: 623  TSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTGQIGSISSSERQQQTPGNNQYYGTPR 802
             SFI SPRWQ PS+YT +ILPQGVV VP WNAY+GQ+GS+SS E QQQT GN+Q YGT R
Sbjct: 179  ASFITSPRWQAPSNYTPLILPQGVVSVPGWNAYSGQVGSVSSPESQQQT-GNSQIYGTSR 237

Query: 803  QSQTSHE--------------VQGLYNLQRDNVFPERPGQPECQFYMKTGDCKYGTVCRF 940
            Q+++ +                 G Y LQR++VFPERPGQPECQFYMKTGDCK+G VCRF
Sbjct: 238  QNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQFYMKTGDCKFGAVCRF 297

Query: 941  HHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRYGICKFGPNCKFDHPMGPYAYNLSSS 1120
            HHPRERLIP P+C               CIFYSRYGICKFGP+CKF HPMG + YNL++S
Sbjct: 298  HHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSCKFHHPMGIFTYNLTAS 357

Query: 1121 ASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGKSR*LSLAVTQQMPSGAENIDGDG 1294
            +SAD P VRRLLGSSSG +A+ LS EG VEA S K R LSL+  +QMP G +NID  G
Sbjct: 358  SSADAP-VRRLLGSSSGSAALTLSSEGLVEAGSTKPRRLSLSEPRQMPPGDDNIDTGG 414


>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  608 bits (1567), Expect = e-171
 Identities = 294/424 (69%), Positives = 331/424 (78%), Gaps = 15/424 (3%)
 Frame = +2

Query: 68   LSSPLD-EDAMWEMNMRGNESMESRQYPERPGEQDCTYYIRTGLCRFGMTCRFNHPPNRK 244
            LS P+   DAMW+MN+R +E+ME+  YPERPGE DC+YYIRTGLCRFG TCRFNHPPNRK
Sbjct: 4    LSYPVSFSDAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRK 63

Query: 245  LAVAAARIKGVYPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVVLNILGYPL 424
            LA+AAAR+KG +PERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGI+GRV LNILGYPL
Sbjct: 64   LAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPL 123

Query: 425  RPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVYPPVHSPSTPGQQSYQGVT 604
            +PNE ECAYYLRTGQCKFG+TCKFHHPQP+N MV LRGSP+YP V SP+TPGQQSY G  
Sbjct: 124  QPNEIECAYYLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTVSSPTTPGQQSYPGGL 183

Query: 605  NWALSRTSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTGQIGSISSSERQQQTPGNNQ 784
                SR SFI SPRWQ PSSYT +ILPQGVV VP WNAY+GQ+GS+SS E QQQT GN+Q
Sbjct: 184  ATTWSRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPESQQQT-GNSQ 242

Query: 785  YYGTPRQSQTSHEVQ--------------GLYNLQRDNVFPERPGQPECQFYMKTGDCKY 922
             YGT R S++ +                 G Y LQR++VFPERPGQPECQFYMKTGDCK+
Sbjct: 243  IYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERPGQPECQFYMKTGDCKF 302

Query: 923  GTVCRFHHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRYGICKFGPNCKFDHPMGPYA 1102
            G VCRFHHPRERLIP P+C               CIFYSRYGICKFGP+CKFDHPMG + 
Sbjct: 303  GAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGVFT 362

Query: 1103 YNLSSSASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGKSR*LSLAVTQQMPSGAENI 1282
            YNL++S+SAD P VRRLLGSSSG   + LS EG VEA   K R LSL+  +QMP G +NI
Sbjct: 363  YNLTASSSADAP-VRRLLGSSSGSPGLTLSSEGLVEAGPTKPRRLSLSEPRQMPPGDDNI 421

Query: 1283 DGDG 1294
            D  G
Sbjct: 422  DTGG 425


>ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 1 [Glycine max]
          Length = 428

 Score =  606 bits (1562), Expect = e-171
 Identities = 290/441 (65%), Positives = 339/441 (76%), Gaps = 15/441 (3%)
 Frame = +2

Query: 17   MEYDGGIPPISVTEGSSLSSPLDEDAMWEMNMRGNESMESRQYPERPGEQDCTYYIRTGL 196
            ME+D  IP  +       S  +  DAMW++N+R +E+MES  YPE PGE DC+YYIRTGL
Sbjct: 1    MEFDAAIPVWTC------SYDVVSDAMWQINLRSSETMESGPYPEHPGEPDCSYYIRTGL 54

Query: 197  CRFGMTCRFNHPPNRKLAVAAARIKGVYPERIGQPECQYYLKTGTCKFGATCKFHHPRDK 376
            CRFG TCRFNHPPNRKLA+AAAR+KG +PERIGQPECQYYLKTGTCKFGATC+FHHPRDK
Sbjct: 55   CRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDK 114

Query: 377  AGIAGRVVLNILGYPLRPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVYPP 556
            AGIAGRV +NILGYPLRPNE ECAYYLRTGQCKFGNTCKFHHPQP+N ++S+R SPVYP 
Sbjct: 115  AGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPT 174

Query: 557  VHSPSTPGQQSY-QGVTNWALSRTSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTGQI 733
            VHSP+TPGQQSY  G+TNW  S +S+IPSPRWQGPSSY  +ILPQG+V VP W+AY+GQ+
Sbjct: 175  VHSPTTPGQQSYATGITNW--SSSSYIPSPRWQGPSSYAPLILPQGMVSVPGWSAYSGQM 232

Query: 734  GSISSSERQQQTPGNNQYYGTPRQSQTSHEVQ--------------GLYNLQRDNVFPER 871
            G    S+  QQT GN Q YGT RQS+ ++                 G Y LQR+N+FPER
Sbjct: 233  G----SDSPQQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPER 288

Query: 872  PGQPECQFYMKTGDCKYGTVCRFHHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRYGI 1051
            P QPECQFYMKTGDCK+G VCRFHHPRER+IP P+C               C+FYSRYGI
Sbjct: 289  PDQPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGI 348

Query: 1052 CKFGPNCKFDHPMGPYAYNLSSSASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGKSR 1231
            CKFGP+CKFDHPMG + YN+S+S SAD P  RR+LGSSSG SA+ LS EG VE+ S   R
Sbjct: 349  CKFGPSCKFDHPMGVFTYNISASPSADAP-GRRMLGSSSGTSALNLSSEGLVESGSANPR 407

Query: 1232 *LSLAVTQQMPSGAENIDGDG 1294
             LSL+ T+Q+PSG +NID +G
Sbjct: 408  RLSLSETRQIPSGDDNIDEEG 428