BLASTX nr result
ID: Coptis24_contig00002198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002198
(762 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40437.3| unnamed protein product [Vitis vinifera] 147 4e-45
ref|XP_002276054.1| PREDICTED: uncharacterized protein LOC100258... 144 4e-44
ref|XP_003529933.1| PREDICTED: uncharacterized protein LOC100777... 140 1e-42
ref|XP_003622497.1| Transmembrane protein 8B [Medicago truncatul... 139 3e-42
ref|XP_004138584.1| PREDICTED: uncharacterized protein LOC101222... 144 5e-42
>emb|CBI40437.3| unnamed protein product [Vitis vinifera]
Length = 805
Score = 147 bits (372), Expect(2) = 4e-45
Identities = 74/134 (55%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
Frame = +1
Query: 307 SVRKIPKSKMPVICLRNGGLPIPDVXXXXXXXXXXXXXXXXXXXXV--LQLVEQCHPLQK 480
S KIPKS +P+IC RNG P+PDV LQ EQC+P+QK
Sbjct: 71 STGKIPKSTLPMICFRNGSPPLPDVSNTTVKDLVLGTLSNGSFGVTGGLQNTEQCYPMQK 130
Query: 481 TIMLMMTNEQISSGVWYIGLFNGIGSARTQSRMINRGSDFSFSANVTVEGCSTSAFWGQY 660
I +TNEQIS GVWY G+FNGIG RTQS+MI+RGS ++FSANV+VEGC+TS GQY
Sbjct: 131 NITTRLTNEQISPGVWYFGVFNGIGPMRTQSKMISRGSSYTFSANVSVEGCTTSTMSGQY 190
Query: 661 CNQSVIPLSCAQSD 702
CNQ+V PLSC SD
Sbjct: 191 CNQTVNPLSCVLSD 204
Score = 60.5 bits (145), Expect(2) = 4e-45
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 131 ELNMHDPITLSSFHYVETTLKPYEWRYIRVDLPESFSSISINLKSDVDI 277
E ++ ++SS Y +T LKPYEWRYIRV+LP FSS+SI L+SDVDI
Sbjct: 19 EYGSYNSFSVSSISYSKTKLKPYEWRYIRVELPLWFSSMSIALESDVDI 67
>ref|XP_002276054.1| PREDICTED: uncharacterized protein LOC100258534 [Vitis vinifera]
Length = 823
Score = 144 bits (363), Expect(2) = 4e-44
Identities = 74/143 (51%), Positives = 88/143 (61%), Gaps = 11/143 (7%)
Frame = +1
Query: 307 SVRKIPKSKMPVICLRNGGLPIPDVXXXXXXXXXXXXXXXXXXXXV-----------LQL 453
S KIPKS +P+IC RNG P+PDV LQ
Sbjct: 71 STGKIPKSTLPMICFRNGSPPLPDVSNTTVKDLVHKGSSAVLVLGTLSNGSFGVTGGLQN 130
Query: 454 VEQCHPLQKTIMLMMTNEQISSGVWYIGLFNGIGSARTQSRMINRGSDFSFSANVTVEGC 633
EQC+P+QK I +TNEQIS GVWY G+FNGIG RTQS+MI+RGS ++FSANV+VEGC
Sbjct: 131 TEQCYPMQKNITTRLTNEQISPGVWYFGVFNGIGPMRTQSKMISRGSSYTFSANVSVEGC 190
Query: 634 STSAFWGQYCNQSVIPLSCAQSD 702
+TS GQYCNQ+V PLSC SD
Sbjct: 191 TTSTMSGQYCNQTVNPLSCVLSD 213
Score = 60.5 bits (145), Expect(2) = 4e-44
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 131 ELNMHDPITLSSFHYVETTLKPYEWRYIRVDLPESFSSISINLKSDVDI 277
E ++ ++SS Y +T LKPYEWRYIRV+LP FSS+SI L+SDVDI
Sbjct: 19 EYGSYNSFSVSSISYSKTKLKPYEWRYIRVELPLWFSSMSIALESDVDI 67
>ref|XP_003529933.1| PREDICTED: uncharacterized protein LOC100777848 [Glycine max]
Length = 825
Score = 140 bits (352), Expect(2) = 1e-42
Identities = 68/140 (48%), Positives = 88/140 (62%)
Frame = +1
Query: 298 DKGSVRKIPKSKMPVICLRNGGLPIPDVXXXXXXXXXXXXXXXXXXXXVLQLVEQCHPLQ 477
D V ++PKS +P+IC R+G P+PD VEQC P++
Sbjct: 89 DVSRVERVPKSSLPLICFRDGSPPLPDALNTSLKDSAVKGINGLD-------VEQCFPME 141
Query: 478 KTIMLMMTNEQISSGVWYIGLFNGIGSARTQSRMINRGSDFSFSANVTVEGCSTSAFWGQ 657
K I + +TNEQIS G WYIGLFNGIG++RTQS+MI RGS +SFSAN++VE CS S G+
Sbjct: 142 KNITMKLTNEQISPGAWYIGLFNGIGASRTQSKMIIRGSAYSFSANISVEACSNSMMRGE 201
Query: 658 YCNQSVIPLSCAQSDVYTNI 717
CN +V PLSC SDVY ++
Sbjct: 202 LCNSTVYPLSCTASDVYNSM 221
Score = 59.7 bits (143), Expect(2) = 1e-42
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +2
Query: 146 DPITLSSFHYVETTLKPYEWRYIRVDLPESFSSISINLKSDVDI 277
D +TLSSF Y +TTL+PY+ YIRVD+P FS++SI+L SDVD+
Sbjct: 45 DVLTLSSFSYPQTTLRPYDLLYIRVDIPPWFSAVSISLNSDVDL 88
>ref|XP_003622497.1| Transmembrane protein 8B [Medicago truncatula]
gi|355497512|gb|AES78715.1| Transmembrane protein 8B
[Medicago truncatula]
Length = 839
Score = 139 bits (351), Expect(2) = 3e-42
Identities = 68/143 (47%), Positives = 91/143 (63%), Gaps = 4/143 (2%)
Frame = +1
Query: 298 DKGSVRKIPKSKMPVICLRNGGLPIPDVXXXXXXXXXXXXXXXXXXXXV----LQLVEQC 465
D + ++PKS +P+IC R+G P+PD + L + EQC
Sbjct: 90 DVSRIERVPKSSLPIICFRDGSPPLPDALNTSLKYSHHDSFTYSSSFSLGINGLDM-EQC 148
Query: 466 HPLQKTIMLMMTNEQISSGVWYIGLFNGIGSARTQSRMINRGSDFSFSANVTVEGCSTSA 645
P++K I + +TNEQIS G WYIGLFNGIG+ARTQSRMI RG+ +SFSAN++VE CS S
Sbjct: 149 FPMEKNITIKLTNEQISPGAWYIGLFNGIGAARTQSRMIIRGTSYSFSANISVEACSNSM 208
Query: 646 FWGQYCNQSVIPLSCAQSDVYTN 714
G++CN++V PLSC SDVY +
Sbjct: 209 MRGEFCNKTVNPLSCTASDVYNS 231
Score = 58.9 bits (141), Expect(2) = 3e-42
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = +2
Query: 155 TLSSFHYVETTLKPYEWRYIRVDLPESFSSISINLKSDVDI 277
T+SSF Y +TTL+PY++RYIRVD+P FS++SI L SDVD+
Sbjct: 49 TVSSFSYPQTTLRPYDFRYIRVDIPPWFSAVSIALNSDVDL 89
>ref|XP_004138584.1| PREDICTED: uncharacterized protein LOC101222074 [Cucumis sativus]
Length = 837
Score = 144 bits (363), Expect(2) = 5e-42
Identities = 73/157 (46%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Frame = +1
Query: 298 DKGSVRKIPKSKMPVICLRNGGLPIPDVXXXXXXXXXXXXXXXXXXXXVL--QLVEQCHP 471
D RK+PK +P+IC R G P+PD + Q +E C+P
Sbjct: 82 DTTKARKLPKRVLPIICFREGSPPLPDASNTSIIDSGLAPLTNVSIEGIQGHQNLELCYP 141
Query: 472 LQKTIMLMMTNEQISSGVWYIGLFNGIGSARTQSRMINRGSDFSFSANVTVEGCSTSAFW 651
+Q+ I + +TNEQI GVWY GLFNGIGS+RTQS+MI RGS ++F+ANVTVEGCS S +
Sbjct: 142 MQQYIEVKLTNEQIPPGVWYFGLFNGIGSSRTQSKMIVRGSSYTFTANVTVEGCSPSTMF 201
Query: 652 GQYCNQSVIPLSCAQSDVYTNITNHFDAGLFNQKAQT 762
GQYCNQ+V PL C+ SD N +A L+NQ ++
Sbjct: 202 GQYCNQTVEPLLCSLSDCRNLAENVLEAILYNQTVES 238
Score = 53.5 bits (127), Expect(2) = 5e-42
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +2
Query: 143 HDPITLSSFHYVETTLKPYEWRYIRVDLPESFSSISINLKSDVDI 277
H+ T+SS Y +T L+P++ RY RV+LP FSS+SI+L SDVD+
Sbjct: 37 HNTFTVSSLTYPDTQLQPFQLRYFRVELPPWFSSLSISLNSDVDL 81