BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002190
         (2963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   187   2e-64
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   190   3e-63
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   179   9e-63
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   192   8e-62
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   167   6e-58

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  187 bits (474), Expect(2) = 2e-64
 Identities = 110/380 (28%), Positives = 184/380 (48%), Gaps = 5/380 (1%)
 Frame = +1

Query: 1837 FSNCLIEAGLYDHAFSGCQYSWTNF----DGKFSKIDRCLINVAWTDLKLNTSVEFATQG 2004
            F   L+++ L +   +   YSW+N     D   S+ID+  +N+ W  +    SV++   G
Sbjct: 161  FQQFLLQSNLIESRSTWSYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPG 220

Query: 2005 IFDHTPVFLSFYEVAKHS-PPFRFCNFWLLHPNFKQTLSSCWNLLPQGSPPFMLFKKLKN 2181
            I DH+P+  +          PF+F N       F +T+   WN +        ++  LK 
Sbjct: 221  ISDHSPLLFNLMTGRPQGGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIWLNLKA 280

Query: 2182 LKCTLKSWSKSLFSNMSGTIAKLKTQLNEVQMLLQSNPTDQALLVSERSVKNELCKWLKM 2361
            +K  LK             +  L+ QL ++Q     +  D  +    +S+ N+L  W  +
Sbjct: 281  VKRELKQMKTQKIGLAHEKVKNLRHQLQDLQSQDDFDHND-IMQTDAKSIMNDLRHWSHI 339

Query: 2362 EEEDLKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINELDGTGREGQDQVAAAFVG 2541
            E+  L+ +S   W   GD  +  F  ++K +     I  +N  DG   +  D+V    + 
Sbjct: 340  EDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILE 399

Query: 2542 YYKSLLGTKSDAVCSSQVLETIDVTVIDASSVQALEADISDLEIKEALFSIADNKSPGPD 2721
            +YK LLGT++  +    +        + A + ++L  +++  EI EAL  I ++K+PG D
Sbjct: 400  FYKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLD 459

Query: 2722 GFNAKFFKKSWDIVGNDFTRAIKFSLNSFNIHKGTNSALLSLIPKCISPSRVDEFRPIAC 2901
            GFNA FFKKSW  +  +    I+   N+  +H+  N  +++L+PK    +RV EFRPIAC
Sbjct: 460  GFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIAC 519

Query: 2902 CNIIYKCIVKVITKRLKNCI 2961
            C +IYK I K++T R+K  I
Sbjct: 520  CTVIYKIISKMLTNRMKGII 539



 Score = 88.6 bits (218), Expect(2) = 2e-64
 Identities = 51/162 (31%), Positives = 80/162 (49%)
 Frame = +2

Query: 1358 VAWNVRGMNNVTKAKSLRSYRITNKISCLCLLETKVRADKFDTISAVCWPSWKSLHTYAS 1537
            V+WNVRGMN+  K K ++++  ++KI    LLET+VR      +       WK L+ Y+ 
Sbjct: 4    VSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNNYSH 63

Query: 1538 GPSGRIWIGWDSNLMTVTKVEESSQFLHCFVSFLPTSHCFHLTVCYASNSRRERLVLWND 1717
                RIWIGW    + VT      Q + C +     SH   +   Y  ++  +R  LW+ 
Sbjct: 64   SARERIWIGWRPAWVNVTLTHTQEQLMVCDIQ--DQSHKLKMVAVYGLHTIADRKSLWSG 121

Query: 1718 LVNI*KTIQGPWTVMRDFNNVLYSHERIGCAPVHPRETTPFR 1843
            L+   +  Q P  ++ DFN V +S++R+    V   ET  F+
Sbjct: 122  LLQCVQQ-QDPMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQ 162


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  190 bits (482), Expect(2) = 3e-63
 Identities = 121/388 (31%), Positives = 193/388 (49%), Gaps = 13/388 (3%)
 Frame = +1

Query: 1837 FSNCLIEAGLYDHAFSGCQYSWTNFDGK---FSKIDRCLINVAWTDLKLNTSVEFATQGI 2007
            F  CL+ + + D  F G  Y+W N         KIDR L+N +W      +   F     
Sbjct: 167  FRECLLTSNISDLPFRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEF 226

Query: 2008 FDHTPVFLSFY-EVAKHSPPFRFCNFWLLHPNFKQTLSSCWNLLP-QGSPPFMLFKKLKN 2181
             DH P  ++   +    + PF+  NF + HP F + +   W+ L  QGS  F L KK K 
Sbjct: 227  SDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKF 286

Query: 2182 LKCTLKSWSKSLFSNMSGTIAKLKTQLNEVQMLLQSNPTDQALLVSERSVKNELCKWLKM 2361
            LK T++++++  +S +   + +    L   Q  L + P+   L   E+       +    
Sbjct: 287  LKGTIRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSSY-LAGLEKEAHRSWAELALA 345

Query: 2362 EEEDLKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINE----LDGTGR--EGQDQV 2523
            EE  L  +S   W   GD    +FH  +  ++      AINE    LD TGR  E  D++
Sbjct: 346  EERFLCQKSRVLWLKCGDSNTTFFHRMMTARR------AINEIHYLLDQTGRRIENTDEL 399

Query: 2524 AAAFVGYYKSLLGTKSDAVCSSQVLETIDVTVI--DASSVQALEADISDLEIKEALFSIA 2697
                V ++K L G+ S  + +  + +   +T    D ++ Q LEA++S+ +IK   F++ 
Sbjct: 400  QTHCVDFFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALP 459

Query: 2698 DNKSPGPDGFNAKFFKKSWDIVGNDFTRAIKFSLNSFNIHKGTNSALLSLIPKCISPSRV 2877
             NKSPGPDG+ ++FFKK+W IVG     A++    S  +    NS  ++++PK  +  R+
Sbjct: 460  SNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRI 519

Query: 2878 DEFRPIACCNIIYKCIVKVITKRLKNCI 2961
             EFRPI+CCN IYK I K++ +RL+N +
Sbjct: 520  TEFRPISCCNAIYKVISKLLARRLENIL 547



 Score = 81.3 bits (199), Expect(2) = 3e-63
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
 Frame = +2

Query: 1346 MIKIVAWNVRGMNNVTKAKSLRSYRITNKISCLCLLETKVRADKFDTISAVCWPSWKSLH 1525
            MI   +WNVRG NN  + ++ R +   +K     +LET+V+  +        +P WKS+ 
Sbjct: 1    MIDTFSWNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVC 60

Query: 1526 TYASGPSGRIWIGWDSNLMTVTKVEESSQFLHCFVSFLPTSHCFHLTVCYASNSRRERLV 1705
             Y     GRIW+ WD   + VT + +S Q + C V     S  F +T  YA N R  R  
Sbjct: 61   NYEFAALGRIWVVWDP-AVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRR 119

Query: 1706 LWNDLVNI---*KTIQGPWTVMRDFNNVL 1783
            LW++L  +     T   PW ++ DFN  L
Sbjct: 120  LWSELELLAANQTTSDKPWIILGDFNQSL 148


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  179 bits (453), Expect(2) = 9e-63
 Identities = 121/384 (31%), Positives = 186/384 (48%), Gaps = 13/384 (3%)
 Frame = +1

Query: 1849 LIEAGLYDHAFSGCQYSWTN----FDGKFSKIDRCLINVAWTDLKLNTSVEFATQGIFDH 2016
            +++A L +   +G  YSW N     D   S+ID+  +NVAW +   +  VE+   GI DH
Sbjct: 168  VLKAQLLEAPTTGLFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAGISDH 227

Query: 2017 TPVFLSFYEVAKHSP---PFRFCNFWLLHPNFKQTLSSCWNLLPQGSPPFMLFKKLKNLK 2187
            +P  L F    +H     PF+F NF      F + +   W           ++ +L+ +K
Sbjct: 228  SP--LIFNLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQAVK 285

Query: 2188 CTLKSWSKSLFSNMSGTIAKLKTQLNEVQMLLQSNPTDQALLVSERSVKNELCKWLKMEE 2367
              LKS+    FS     + +L+ +L  VQ L + +   + L   E+ +  +L KW  ++E
Sbjct: 286  RALKSFHSKKFSKAHCQVEELRRKLAAVQALPEVSQVSE-LQEEEKDLIAQLRKWSTIDE 344

Query: 2368 EDLKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINELDGTGREGQDQVAAAFVGYY 2547
              LK +S   W   GD  + +F  +IK +K R  I  +    G       ++      +Y
Sbjct: 345  SILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFY 404

Query: 2548 KSLLGTKSDAVCSSQVLETIDVTVI------DASSVQALEADISDLEIKEALFSIADNKS 2709
            + LLGT      SS  LE ID+ V+       A+S   L   I+  EI +AL  I D K+
Sbjct: 405  RRLLGT------SSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKA 458

Query: 2710 PGPDGFNAKFFKKSWDIVGNDFTRAIKFSLNSFNIHKGTNSALLSLIPKCISPSRVDEFR 2889
            PG DGFN+ FFKKSW ++  +    I     +  +HK  N   ++LIPK        ++R
Sbjct: 459  PGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYR 518

Query: 2890 PIACCNIIYKCIVKVITKRLKNCI 2961
            PIACC+ +YK I K++TKRL+  I
Sbjct: 519  PIACCSTLYKIISKILTKRLQAVI 542



 Score = 90.9 bits (224), Expect(2) = 9e-63
 Identities = 49/165 (29%), Positives = 79/165 (47%)
 Frame = +2

Query: 1349 IKIVAWNVRGMNNVTKAKSLRSYRITNKISCLCLLETKVRADKFDTISAVCWPSWKSLHT 1528
            +KI  WNVRG+N+  K K ++ +  + KIS   L ET+VR      I       W  ++ 
Sbjct: 1    MKITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINN 60

Query: 1529 YASGPSGRIWIGWDSNLMTVTKVEESSQFLHCFVSFLPTSHCFHLTVCYASNSRRERLVL 1708
            YA  P GRIW+GW +N + +  +  + Q +   V      + F +   Y  ++  +R VL
Sbjct: 61   YACSPRGRIWVGWLNNDVNINVLSVTEQVITMEVKNSYGLNMFKMAAVYGLHTIADRKVL 120

Query: 1709 WNDLVNI*KTIQGPWTVMRDFNNVLYSHERIGCAPVHPRETTPFR 1843
            W +L N       P  ++ D+N V  + +R+    V   ET+  R
Sbjct: 121  WEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLR 165


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
            predicted protein [Populus trichocarpa]
          Length = 503

 Score =  192 bits (489), Expect(2) = 8e-62
 Identities = 112/361 (31%), Positives = 186/361 (51%), Gaps = 5/361 (1%)
 Frame = +1

Query: 1846 CLIEAGLYDHAFSGCQYSWTNFDGK---FSKIDRCLINVAWTDLKLNTSVEFATQGIFDH 2016
            C+ EA + D  +SG  Y+W+N   +     K+DR L+N  W      + V F   GI DH
Sbjct: 152  CIREAKVDDLRYSGMHYTWSNQCPENLIMRKLDRVLVNEKWNLNFPLSEVRFLPSGISDH 211

Query: 2017 TPVFLSFYEVAKH-SPPFRFCNFWLLHPNFKQTLSSCWNLLPQGSPPFMLFKKLKNLKCT 2193
            +P+ +      ++   PFRF + W+      Q    C        P + L   LK LK  
Sbjct: 212  SPMVVKVIGNDQNIKKPFRFFDMWM-----DQNSGGC--------PMYQLCCNLKKLKQE 258

Query: 2194 LKSWSKSLFSNMSGTIAKLKTQLNEVQMLLQSNPTDQALLVSERSVKNELCKWLKMEEED 2373
            LK ++ + FSN+S  +   K ++++ Q  L +   +  L + ER V ++    ++ EE  
Sbjct: 259  LKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESF 318

Query: 2374 LKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINELDGTGREGQDQVAAAFVGYYKS 2553
             K ++   W   GD+  +YFH S+  + NR  + ++   DG   EG + V +  + Y+  
Sbjct: 319  FKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSEVIAYFHR 378

Query: 2554 LLGT-KSDAVCSSQVLETIDVTVIDASSVQALEADISDLEIKEALFSIADNKSPGPDGFN 2730
            +LG  +   V + +V+E+     + ++    L   ++  EIK A+FS+ +NK+PG DGFN
Sbjct: 379  VLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKHAMFSLKNNKAPGLDGFN 438

Query: 2731 AKFFKKSWDIVGNDFTRAIKFSLNSFNIHKGTNSALLSLIPKCISPSRVDEFRPIACCNI 2910
            A FFK+ W IVG D   A++    +  + K  N+  +SLIPK  +P+R+ +FRPI+CCN 
Sbjct: 439  AGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMNATSISLIPKVANPTRLTDFRPISCCNT 498

Query: 2911 I 2913
            +
Sbjct: 499  V 499



 Score = 73.9 bits (180), Expect(2) = 8e-62
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
 Frame = +2

Query: 1430 KISCLCLLETKVRADKFDTISAVCWPSWKSLHTYASGPSGRIWIGWDSNLMTVTKVEESS 1609
            +I+   L+ET+V+    D +S +   SW  L+ Y     GRIW+ W+++ + V     S 
Sbjct: 12   RIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVNVFGMSD 71

Query: 1610 QFLHCFVSFLPTSHCFHLTVCYASNSRRERLVLWNDLVNI*KTIQG-PWTVMRDFNNVLY 1786
            Q +H  V+ L T+  F+ ++ Y  N+   R  LW+D+V+     +  PW +M DFN +  
Sbjct: 72   QAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRN 131

Query: 1787 SHERIG 1804
               R+G
Sbjct: 132  QSHRLG 137


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  167 bits (423), Expect(2) = 6e-58
 Identities = 115/380 (30%), Positives = 182/380 (47%), Gaps = 11/380 (2%)
 Frame = +1

Query: 1846 CLIEAGLYDHAFSGCQYSWTNFDGK---FSKIDRCLINVAWTDLKLNTSVEFATQGIFDH 2016
            CL ++ L D    G  ++W+N         K+DR L N  W  +  +    F   G  DH
Sbjct: 171  CLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDH 230

Query: 2017 TPVFLSFYEVAKHSPP----FRFCNFWLLHPNFKQTLSSCW--NLLPQGSPPFMLFKKLK 2178
             P  +    +    PP    F++ +F   HP++   LS+ W  N L  GS  F L + LK
Sbjct: 231  APCIIL---IDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLV-GSHMFSLRQHLK 286

Query: 2179 NLKCTLKSWSKSLFSNMSGTIAKLKTQLNEVQMLLQSNPTDQALLVSERSVKNELCKWLK 2358
              K   ++ ++  FSN+    A+  T+L ++Q+ L ++P+D  L   E   + +   +  
Sbjct: 287  VAKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSD-TLFRREHVARKQWIFFAA 345

Query: 2359 MEEEDLKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINELDGTGREGQDQVAAAFV 2538
              E   + +S   W   GD    +FH ++   +    I  +   DG   E  DQ+    +
Sbjct: 346  ALESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLI 405

Query: 2539 GYYKSLLGTKSDAVCSSQVLETIDVTVIDASSVQALEADI--SDLEIKEALFSIADNKSP 2712
             YY  LLG  S+ V    V +   +      S  A +     S+ EI + LFS+  NK+P
Sbjct: 406  AYYSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAP 465

Query: 2713 GPDGFNAKFFKKSWDIVGNDFTRAIKFSLNSFNIHKGTNSALLSLIPKCISPSRVDEFRP 2892
            GPDGF  +FF ++W IV +    AI+    S N+ +G N+  ++LIPK     R+ +FRP
Sbjct: 466  GPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRP 525

Query: 2893 IACCNIIYKCIVKVITKRLK 2952
            +ACC  IYK I ++I++RLK
Sbjct: 526  VACCTTIYKVITRIISRRLK 545



 Score = 86.3 bits (212), Expect(2) = 6e-58
 Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = +2

Query: 1349 IKIVAWNVRGMNNVTKAKSLRSYRITNKISCLCLLETKVRADKFDTISAVCWPSWKSLHT 1528
            +K+  WN+RG+N+  + + +RS+  +N +   C LET V  +  +++ A   P W+    
Sbjct: 1    MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60

Query: 1529 YASGPSGRIWIGWDSNLMTVTKVEESSQFLHCFVSFLPTSHCFHLTVCYASNSRRERLVL 1708
            Y     GRIWI WD ++ +V   + + Q + C +        F +   Y  NS  +R  L
Sbjct: 61   YCCSELGRIWIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSL 119

Query: 1709 WNDLVNI*KTIQ---GPWTVMRDFNNVLYSHE 1795
            W D++ + +T      PW ++ DFN +  + E
Sbjct: 120  WEDILVLSRTSPLSVTPWLLLGDFNQIAAASE 151