BLASTX nr result

ID: Coptis24_contig00002189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002189
         (1907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y su...   325   3e-86
gb|AFK37452.1| unknown [Lotus japonicus]                              310   9e-82
dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]          310   1e-81
emb|CBI39143.3| unnamed protein product [Vitis vinifera]              309   1e-81
ref|XP_003521500.1| PREDICTED: nuclear transcription factor Y su...   303   1e-79

>ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Vitis
            vinifera]
          Length = 330

 Score =  325 bits (832), Expect = 3e-86
 Identities = 172/331 (51%), Positives = 220/331 (66%), Gaps = 2/331 (0%)
 Frame = +3

Query: 264  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKPVSGDHPTGGNQ 443
            +TMQT  FK+H G  HNP  Q     +VPWWSGLGSQ+VY ESF QLK +S +HP  G+Q
Sbjct: 1    MTMQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQ 60

Query: 444  FTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQ--QASLARQSPQPGYQN 617
             T + + E    D   +    N++QFTIF  + K+S   QK Q  QA+++ QS  P YQ 
Sbjct: 61   LTAIKQVELGAEDGTDKG---NSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQT 117

Query: 618  CFELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGIL 797
             FELG  QPMVC  YPY DQ YGV + Y     GRIMLPL++ ++DGPI+VNAKQYHGI+
Sbjct: 118  RFELGFGQPMVCVKYPYADQCYGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGII 177

Query: 798  RRRQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKKGHSEKGVTVKENLG 977
            RRRQSRAKAELENKL + RKPY+HESRHLHA+RR RGCGGRFL K  +  K  T  + + 
Sbjct: 178  RRRQSRAKAELENKLTRARKPYMHESRHLHAMRRPRGCGGRFLKKNLNGGKCGTDMKKVD 237

Query: 978  ECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLHS 1157
                S P+GS  SEVLQS+  N+N  K+  G  S L GSEVTS+YSR  L ++  +++ +
Sbjct: 238  NRQLSQPTGSQISEVLQSDGGNMNSPKEANGNLSKLLGSEVTSMYSRRYLHQFPVNNVQA 297

Query: 1158 SAFHSLSNIIDSGQGISTSNRWVTAADGCCD 1250
            S   +L +++D G GI   ++WV AAD  C+
Sbjct: 298  SV-DTLVDMMDRGHGIVMPSKWVAAADNRCN 327


>gb|AFK37452.1| unknown [Lotus japonicus]
          Length = 328

 Score =  310 bits (794), Expect = 9e-82
 Identities = 170/334 (50%), Positives = 217/334 (64%), Gaps = 4/334 (1%)
 Frame = +3

Query: 264  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKPVSGDHPTGGNQ 443
            + MQT    +H G+ HN + Q     S PWWS  GSQAVYGES  Q+KP S + P   +Q
Sbjct: 1    MAMQTANLIEHEGIAHNFVGQLSSATSAPWWSAFGSQAVYGESCGQMKPFSLEPPISVDQ 60

Query: 444  FTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQQASLARQSPQPGYQNCF 623
                 +  +RG +QV  K +  T+QFTIFP D K  G  QK Q     + SP   +   F
Sbjct: 61   LAA-GKQSARGAEQVLAKGH--TAQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSR-F 116

Query: 624  ELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRR 803
            ELG +QPM+CA YPY DQFYG+ +TY    +GRIMLPLN+ +++GPI+VNAKQYHGI+RR
Sbjct: 117  ELGFSQPMICAKYPYTDQFYGLFSTYGPQISGRIMLPLNMTTDEGPIYVNAKQYHGIIRR 176

Query: 804  RQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKK----GHSEKGVTVKEN 971
            RQSRAKA L+ K+ K RKPYLHESRHLHALRR RGCGGRFL  K    G+ + G  VK+ 
Sbjct: 177  RQSRAKAVLDRKMTKRRKPYLHESRHLHALRRPRGCGGRFLNTKVSANGNGKTGRDVKKT 236

Query: 972  LGECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHL 1151
             GE  +S  SGS  S+V QSE   LN SK+  G   ++SG EVTS+YSRG  D + F+HL
Sbjct: 237  GGEQLQS--SGSQGSDVFQSEVGTLNSSKETNGSSPNVSGLEVTSMYSRGGFDTFSFNHL 294

Query: 1152 HSSAFHSLSNIIDSGQGISTSNRWVTAADGCCDL 1253
             SS +  L++++D G+GI  + +WV A    C+L
Sbjct: 295  GSSVY-PLADMVDCGRGIMPT-KWVAAGGNSCNL 326


>dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]
          Length = 328

 Score =  310 bits (793), Expect = 1e-81
 Identities = 170/334 (50%), Positives = 217/334 (64%), Gaps = 4/334 (1%)
 Frame = +3

Query: 264  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKPVSGDHPTGGNQ 443
            + MQT    +H G+ HN + Q     S PWWS  GSQAVYGES  Q+KP S + P   +Q
Sbjct: 1    MAMQTANLIEHEGIAHNFVGQLSSATSAPWWSAFGSQAVYGESCGQMKPFSLEPPISVDQ 60

Query: 444  FTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQQASLARQSPQPGYQNCF 623
                 +  +RG +QV  K +  T+QFTIFP D K  G  QK Q     + SP   +   F
Sbjct: 61   LAA-GKQSARGAEQVLAKGH--TTQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSR-F 116

Query: 624  ELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRR 803
            ELG +QPM+CA YPY DQFYG+ +TY    +GRIMLPLN+ +++GPI+VNAKQYHGI+RR
Sbjct: 117  ELGFSQPMICAKYPYTDQFYGLFSTYGPQISGRIMLPLNLTTDEGPIYVNAKQYHGIIRR 176

Query: 804  RQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKK----GHSEKGVTVKEN 971
            RQSRAKA L+ K+ K RKPYLHESRHLHALRR RGCGGRFL  K    G+ + G  VK+ 
Sbjct: 177  RQSRAKAVLDRKMTKRRKPYLHESRHLHALRRPRGCGGRFLNTKVSANGNGKTGRDVKKT 236

Query: 972  LGECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHL 1151
             GE  +S  SGS  S+V QSE   LN SK+  G   ++SG EVTS+YSRG  D + F+HL
Sbjct: 237  GGEQLQS--SGSQGSDVFQSEVGTLNSSKETNGSGPNVSGLEVTSMYSRGGFDTFSFNHL 294

Query: 1152 HSSAFHSLSNIIDSGQGISTSNRWVTAADGCCDL 1253
             SS +  L++++D G+GI  + +WV A    C+L
Sbjct: 295  GSSVY-PLADMVDCGRGIMPT-KWVAAGGNSCNL 326


>emb|CBI39143.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  309 bits (792), Expect = 1e-81
 Identities = 169/329 (51%), Positives = 207/329 (62%), Gaps = 2/329 (0%)
 Frame = +3

Query: 270  MQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKPVSGDHPTGGNQFT 449
            MQT  FK+H G  HNP  Q     +VPWWSGLGSQ+VY ESF QLK +S +HP  G+Q T
Sbjct: 1    MQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQLT 60

Query: 450  VVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQ--QASLARQSPQPGYQNCF 623
             + + E    D   +    N++QFTIF  + K+S   QK Q  QA+++ QS  P YQ  F
Sbjct: 61   AIKQVELGAEDGTDKG---NSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQTRF 117

Query: 624  ELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRR 803
            ELG  QPMVC  YPY DQ YGV + Y     GRIMLPL++ ++DGPI+VNAKQYHGI+RR
Sbjct: 118  ELGFGQPMVCVKYPYADQCYGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGIIRR 177

Query: 804  RQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKKGHSEKGVTVKENLGEC 983
            RQSRAKAELENKL + RKPY+HESRHLHA+RR RGCGGRFL K  +  K  T  + +   
Sbjct: 178  RQSRAKAELENKLTRARKPYMHESRHLHAMRRPRGCGGRFLKKNLNGGKCGTDMKKVDNR 237

Query: 984  HRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLHSSA 1163
              S P+GS  SEVLQS+  N+N  K+  G  S L GSEVTS+YSR    RY         
Sbjct: 238  QLSQPTGSQISEVLQSDGGNMNSPKEANGNLSKLLGSEVTSMYSR----RY--------- 284

Query: 1164 FHSLSNIIDSGQGISTSNRWVTAADGCCD 1250
                   +  G GI   ++WV AAD  C+
Sbjct: 285  -------LHQGHGIVMPSKWVAAADNRCN 306


>ref|XP_003521500.1| PREDICTED: nuclear transcription factor Y subunit A-10 isoform 1
            [Glycine max] gi|356505445|ref|XP_003521501.1| PREDICTED:
            nuclear transcription factor Y subunit A-10 isoform 2
            [Glycine max]
          Length = 328

 Score =  303 bits (776), Expect = 1e-79
 Identities = 170/333 (51%), Positives = 218/333 (65%), Gaps = 5/333 (1%)
 Frame = +3

Query: 270  MQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVY-GESFVQLKPVSGDHPTGGNQF 446
            MQTV  K+H G  HN +       S PWWS  GSQ+V+ GES  Q+KP S + P   +Q 
Sbjct: 1    MQTVYLKEHEGNAHNFVGTLSSAASAPWWSAFGSQSVHQGESCGQVKPFSLELPNCIDQL 60

Query: 447  TVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQQASLARQSPQPGYQNCFE 626
                +  +RG DQV  K ++  +QFTIFP D K S   QK Q  +++ QS     Q+ FE
Sbjct: 61   AAT-KPLARGADQVLGKGHI--TQFTIFPDDCKMSDDAQKLQ-TTMSLQSSLTDPQSRFE 116

Query: 627  LGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRRR 806
            +G + P +CA YPY DQFYG+ + Y    +GRIMLPLN+ S+D PI+VNAKQYHGI+RRR
Sbjct: 117  IGFSLPTICAKYPYTDQFYGLFSAYAPQISGRIMLPLNMTSDDEPIYVNAKQYHGIIRRR 176

Query: 807  QSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKK----GHSEKGVTVKENL 974
            QSRAKA L++KL K RKPY+HESRHLHA+RR RGCGGRFL  K    G+ + G  V + +
Sbjct: 177  QSRAKAVLDHKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKNSVDGNGKIGNEVHKTV 236

Query: 975  GECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLH 1154
            GE  +S  SGS SSE LQSE    N SK+  G   ++SGSEVTS+YSRG LD +  +HL 
Sbjct: 237  GEQLQS--SGSQSSEFLQSEVGTFNSSKETNGSSPNISGSEVTSMYSRGGLDSFSLNHL- 293

Query: 1155 SSAFHSLSNIIDSGQGISTSNRWVTAADGCCDL 1253
             SA HS +++ID G+G+    +WV AA  CC+L
Sbjct: 294  GSAVHSFADMIDGGRGMIIPTKWVAAAGNCCNL 326


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