BLASTX nr result

ID: Coptis24_contig00002186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002186
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308934.1| predicted protein [Populus trichocarpa] gi|2...    61   4e-07
ref|XP_002278603.2| PREDICTED: kinesin-4-like [Vitis vinifera]         60   6e-07
emb|CBI29818.3| unnamed protein product [Vitis vinifera]               60   6e-07
ref|XP_002533437.1| kinesin heavy chain, putative [Ricinus commu...    59   1e-06
dbj|BAJ53207.1| JHL06B08.9 [Jatropha curcas]                           57   7e-06

>ref|XP_002308934.1| predicted protein [Populus trichocarpa] gi|222854910|gb|EEE92457.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 52/124 (41%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
 Frame = -3

Query: 848  RSPTSACHSRIRGTE-SRIRRP-IQXXXXXXXXXXXXKVVGTVIPSEFSLSRKSQTPGVA 675
            RSPTS    R+  T+ SR + P +Q              V  ++ SE  +S  SQ   + 
Sbjct: 748  RSPTSLYQKRMVKTDNSRTQIPTLQLPITPEPQVISRNEVKILVQSELGVSTDSQAANLV 807

Query: 674  MSTMKKGS-IRKSLMTIRKLINAPNKRNQQHPVGTLSHTTVNVND---KSTPAADARTLR 507
             ST  KGS IRKSL TI KLIN  +KRNQQ      S      ND   K+   A+ARTLR
Sbjct: 808  RSTHGKGSQIRKSLRTIGKLINGSDKRNQQISKEEFSPIIGICNDTDLKTPLTANARTLR 867

Query: 506  RQSL 495
            RQSL
Sbjct: 868  RQSL 871


>ref|XP_002278603.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 977

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
 Frame = -3

Query: 854  APRSPTSACHSRIRGTESRIRRPIQXXXXXXXXXXXXKVVGTVIPSEFSLSRKSQTPGVA 675
            AP+SP S+ + + R  ++  R  +             K V T++ S+ S+S+ SQ P   
Sbjct: 827  APKSPVSSTY-KSRVAKAASRTQVAPFQLTKTPEPDRKEVQTMMQSDLSVSKDSQIPSFI 885

Query: 674  MSTMKKGS-IRKSLMTIRKLINAPNKRNQQHPVGTLSHTTVNVN---DKSTPAADARTLR 507
             S   KGS IRKSL TI KLIN   KRNQQ  +   +    + N    +S   A+AR +R
Sbjct: 886  SSGNGKGSQIRKSLRTIGKLINGSEKRNQQKLMEARTPIKGSNNAEGGRSPLTANARAMR 945

Query: 506  RQSL-XXXXXXXXXXXXXXXGNDSCSKDNQNA 414
            RQSL                 +DSCS + +NA
Sbjct: 946  RQSLTGIQTSGPWRSSVIGKSSDSCSNETRNA 977


>emb|CBI29818.3| unnamed protein product [Vitis vinifera]
          Length = 992

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
 Frame = -3

Query: 854  APRSPTSACHSRIRGTESRIRRPIQXXXXXXXXXXXXKVVGTVIPSEFSLSRKSQTPGVA 675
            AP+SP S+ + + R  ++  R  +             K V T++ S+ S+S+ SQ P   
Sbjct: 842  APKSPVSSTY-KSRVAKAASRTQVAPFQLTKTPEPDRKEVQTMMQSDLSVSKDSQIPSFI 900

Query: 674  MSTMKKGS-IRKSLMTIRKLINAPNKRNQQHPVGTLSHTTVNVN---DKSTPAADARTLR 507
             S   KGS IRKSL TI KLIN   KRNQQ  +   +    + N    +S   A+AR +R
Sbjct: 901  SSGNGKGSQIRKSLRTIGKLINGSEKRNQQKLMEARTPIKGSNNAEGGRSPLTANARAMR 960

Query: 506  RQSL-XXXXXXXXXXXXXXXGNDSCSKDNQNA 414
            RQSL                 +DSCS + +NA
Sbjct: 961  RQSLTGIQTSGPWRSSVIGKSSDSCSNETRNA 992


>ref|XP_002533437.1| kinesin heavy chain, putative [Ricinus communis]
            gi|223526711|gb|EEF28944.1| kinesin heavy chain, putative
            [Ricinus communis]
          Length = 987

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
 Frame = -3

Query: 854  APRSPTSACHS-RIRGTESRIRRPI-QXXXXXXXXXXXXKVVGTVIPSEFSLSRKSQTPG 681
            AP+SPTS+ +  R+  T+SR + P+ Q            + V  +  SE +L    QT  
Sbjct: 799  APKSPTSSSYQKRMVKTDSRSQIPLLQLPMTPEPQVLARREVQIMRQSELALPTDLQTIS 858

Query: 680  VAMSTMKKGS-IRKSLMTIRKLINAPNKRNQQHPVGT---LSHTTVNVNDKSTP-AADAR 516
            V  S   KGS IRKSL TI KLIN   KR+QQ P      ++ T+   ND  +P  A AR
Sbjct: 859  VINSANGKGSQIRKSLRTIGKLINGSEKRHQQPPKAAESPINCTSNKKNDLKSPLTASAR 918

Query: 515  TLRRQSL 495
             +RRQSL
Sbjct: 919  AVRRQSL 925


>dbj|BAJ53207.1| JHL06B08.9 [Jatropha curcas]
          Length = 979

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 52/127 (40%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
 Frame = -3

Query: 851  PRS--PTSACHSRIRGTESRIRRPI-QXXXXXXXXXXXXKVVGTVIPSEFSLSRKSQTPG 681
            PRS  P+S+   R   T++R + P  Q              V  V+ +E +L   SQT  
Sbjct: 809  PRSSPPSSSHQKRTVKTDNRTQIPFPQLPTTPERQLPSRNEVEIVMQNECALPTDSQTSN 868

Query: 680  VAMSTMKKGS-IRKSLMTIRKLINAPNKRNQQHPVGTLS---HTTVNVND-KSTPAADAR 516
            +  ST  KGS IRKSL TI KLIN   KRNQQ      S   + T N ND KS   A+ R
Sbjct: 869  LISSTNGKGSQIRKSLRTIGKLINGSEKRNQQRSKEAESPAINGTGNNNDIKSPITANGR 928

Query: 515  TLRRQSL 495
             +RRQSL
Sbjct: 929  AVRRQSL 935


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