BLASTX nr result

ID: Coptis24_contig00002184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002184
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16910.3| unnamed protein product [Vitis vinifera]              132   1e-28
ref|XP_002278556.1| PREDICTED: kanadaptin-like [Vitis vinifera]       132   1e-28
ref|XP_002331283.1| predicted protein [Populus trichocarpa] gi|2...   127   4e-27
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]      123   1e-25
ref|XP_004137146.1| PREDICTED: kanadaptin-like [Cucumis sativus]      123   1e-25

>emb|CBI16910.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  132 bits (333), Expect = 1e-28
 Identities = 78/185 (42%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
 Frame = -2

Query: 1150 KEIKQEAAPSNVDDSDQFVNYKDRKEALGSTVSIQVESGIEAAAPGLIIRKRKLVEKPKE 971
            +E  QEAA  N  +SDQFV+YKDR +ALG    +++ESGIE AAPGLIIRKRK +E  ++
Sbjct: 516  EETPQEAALVNNHESDQFVDYKDRMKALGI---VEMESGIETAAPGLIIRKRKQLEISED 572

Query: 970  SDDKATQXXXXXXXXXXXXXXXXXXXLKHQKGLLVSDEEG-HDGAGAQTRNENTXXXXXX 794
            SDDKA +                   LKH +G   S++E  H+       N+ +      
Sbjct: 573  SDDKAPEQSTSSSGPNIMAEDAVALLLKHSRGYYASEDENRHEKQDISGGNQPS------ 626

Query: 793  XXXXXXXXXXXXXXXXTRNENTKSRRILGPEKPAFLGSNPDYEGWAPPKGQSGDGRTSLN 614
                               +  K +R+LGPE+P+FL    DYE W PP+GQSGDGRTSLN
Sbjct: 627  ------------------KDKKKPKRVLGPERPSFLDGGSDYETWVPPEGQSGDGRTSLN 668

Query: 613  ERFGY 599
            +RFGY
Sbjct: 669  DRFGY 673


>ref|XP_002278556.1| PREDICTED: kanadaptin-like [Vitis vinifera]
          Length = 753

 Score =  132 bits (333), Expect = 1e-28
 Identities = 78/185 (42%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
 Frame = -2

Query: 1150 KEIKQEAAPSNVDDSDQFVNYKDRKEALGSTVSIQVESGIEAAAPGLIIRKRKLVEKPKE 971
            +E  QEAA  N  +SDQFV+YKDR +ALG    +++ESGIE AAPGLIIRKRK +E  ++
Sbjct: 596  EETPQEAALVNNHESDQFVDYKDRMKALGI---VEMESGIETAAPGLIIRKRKQLEISED 652

Query: 970  SDDKATQXXXXXXXXXXXXXXXXXXXLKHQKGLLVSDEEG-HDGAGAQTRNENTXXXXXX 794
            SDDKA +                   LKH +G   S++E  H+       N+ +      
Sbjct: 653  SDDKAPEQSTSSSGPNIMAEDAVALLLKHSRGYYASEDENRHEKQDISGGNQPS------ 706

Query: 793  XXXXXXXXXXXXXXXXTRNENTKSRRILGPEKPAFLGSNPDYEGWAPPKGQSGDGRTSLN 614
                               +  K +R+LGPE+P+FL    DYE W PP+GQSGDGRTSLN
Sbjct: 707  ------------------KDKKKPKRVLGPERPSFLDGGSDYETWVPPEGQSGDGRTSLN 748

Query: 613  ERFGY 599
            +RFGY
Sbjct: 749  DRFGY 753


>ref|XP_002331283.1| predicted protein [Populus trichocarpa] gi|222873708|gb|EEF10839.1|
            predicted protein [Populus trichocarpa]
          Length = 717

 Score =  127 bits (320), Expect = 4e-27
 Identities = 80/188 (42%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
 Frame = -2

Query: 1150 KEIKQEAAPSNVDDSDQFVNYKDRKEALGST--VSIQVESGIEAAAPGLIIRKRKLVEKP 977
            KE +QE     +D+SDQFV+YKDR++ L S     + V+S IE+AAPGLIIRKRK  E P
Sbjct: 555  KETQQEEVLV-MDESDQFVDYKDRQKILSSVDGAEVNVDSEIESAAPGLIIRKRKGAEGP 613

Query: 976  KESDDKAT-QXXXXXXXXXXXXXXXXXXXLKHQKGLLVSDEEG-HDGAGAQTRNENTXXX 803
              +D++A  Q                   LKH++G    DEEG H        N+     
Sbjct: 614  GANDNEAPEQLTSSSVGAELLAEDAVALLLKHKRGYHAEDEEGNHQSQEISGTNQRG--- 670

Query: 802  XXXXXXXXXXXXXXXXXXXTRNENTKSRRILGPEKPAFLGSNPDYEGWAPPKGQSGDGRT 623
                                  E  + +R+LGPEKP+FL SNPDYE W PP+GQSGDGRT
Sbjct: 671  ---------------------KEKKRPKRVLGPEKPSFLNSNPDYETWVPPEGQSGDGRT 709

Query: 622  SLNERFGY 599
            SLN+RFGY
Sbjct: 710  SLNDRFGY 717


>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score =  123 bits (308), Expect = 1e-25
 Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 7/193 (3%)
 Frame = -2

Query: 1156 QKKEIKQEAAPSNVDDSDQFVNYKDRKEALGSTVS--IQVESGIEAAAPGLIIRKRK--- 992
            + +EI++EA P ++ +SD FV+YKDRKE L ++ +   +++S IE+AAPGLI+RKRK   
Sbjct: 795  KSEEIQKEAVPLDIQESDDFVDYKDRKEVLQNSDNKPTKIDSVIESAAPGLILRKRKQED 854

Query: 991  LVEKPKESDDKATQXXXXXXXXXXXXXXXXXXXLKHQKGLLVSDEEG--HDGAGAQTRNE 818
            L + P ++  ++T                     KHQ+G   SDEE   H+   +  RN+
Sbjct: 855  LSDSPLDASQQSTASSEVDRAKFKAEDAVALLL-KHQRGYHGSDEEEVRHESKRSTGRNK 913

Query: 817  NTXXXXXXXXXXXXXXXXXXXXXXTRNENTKSRRILGPEKPAFLGSNPDYEGWAPPKGQS 638
            +                        + +  K +R+LGPEKP+FL +  DYE W PP+GQS
Sbjct: 914  S------------------------KKDEKKPKRVLGPEKPSFLDAKADYESWVPPEGQS 949

Query: 637  GDGRTSLNERFGY 599
            GDGRT+LNER+GY
Sbjct: 950  GDGRTALNERYGY 962


>ref|XP_004137146.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 766

 Score =  123 bits (308), Expect = 1e-25
 Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 7/193 (3%)
 Frame = -2

Query: 1156 QKKEIKQEAAPSNVDDSDQFVNYKDRKEALGSTVS--IQVESGIEAAAPGLIIRKRK--- 992
            + +EI++EA P ++ +SD FV+YKDRKE L ++ +   +++S IE+AAPGLI+RKRK   
Sbjct: 599  KSEEIQKEAVPLDIQESDDFVDYKDRKEVLQNSDNKPTKIDSVIESAAPGLILRKRKQED 658

Query: 991  LVEKPKESDDKATQXXXXXXXXXXXXXXXXXXXLKHQKGLLVSDEEG--HDGAGAQTRNE 818
            L + P ++  ++T                     KHQ+G   SDEE   H+   +  RN+
Sbjct: 659  LSDSPLDASQQSTASSEVDRAKFKAEDAVALLL-KHQRGYHGSDEEEVRHESKRSTGRNK 717

Query: 817  NTXXXXXXXXXXXXXXXXXXXXXXTRNENTKSRRILGPEKPAFLGSNPDYEGWAPPKGQS 638
            +                        + +  K +R+LGPEKP+FL +  DYE W PP+GQS
Sbjct: 718  S------------------------KKDEKKPKRVLGPEKPSFLDAKADYESWVPPEGQS 753

Query: 637  GDGRTSLNERFGY 599
            GDGRT+LNER+GY
Sbjct: 754  GDGRTALNERYGY 766


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