BLASTX nr result

ID: Coptis24_contig00002175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002175
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283881.1| PREDICTED: 4,5-DOPA dioxygenase extradiol-li...   439   e-121
ref|XP_002267696.2| PREDICTED: 4,5-DOPA dioxygenase extradiol-li...   435   e-119
emb|CAN83326.1| hypothetical protein VITISV_013290 [Vitis vinifera]   428   e-117
tpg|DAA56548.1| TPA: hypothetical protein ZEAMMB73_133109 [Zea m...   423   e-116
ref|XP_002458858.1| hypothetical protein SORBIDRAFT_03g041600 [S...   418   e-114

>ref|XP_002283881.1| PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein [Vitis
           vinifera] gi|147811122|emb|CAN61349.1| hypothetical
           protein VITISV_021798 [Vitis vinifera]
           gi|297739669|emb|CBI29851.3| unnamed protein product
           [Vitis vinifera]
          Length = 263

 Score =  439 bits (1130), Expect = e-121
 Identities = 205/261 (78%), Positives = 235/261 (90%)
 Frame = -2

Query: 977 MDTFFISHGSPTLSIDDSLPARHFLKSWEDKVFQEKPKSILVISGHWETSEPTVNVINGP 798
           MDTF+ISHGSPTLSID+SLPARHFLKSW++KV  ++P SILVIS HWET EPTVNV+   
Sbjct: 1   MDTFYISHGSPTLSIDESLPARHFLKSWKEKVMGQRPTSILVISAHWETHEPTVNVVP-Q 59

Query: 797 NDTIYDFYGFPKPMYQLKYPAPGAPELAMRAKELLLASGFNCVKEDKARGLDHGAWVPIM 618
           NDTIYDFYGFPK MY+LKYPAPGAPELA R KELL+AS F  VKEDK RGLDHGAWVP+M
Sbjct: 60  NDTIYDFYGFPKSMYKLKYPAPGAPELAKRVKELLMASNFKSVKEDKKRGLDHGAWVPLM 119

Query: 617 LMYPKANIPVCQLSVQTDMDGAYHYNMGKALAPLREEGVLIIGSGSATHNLRALDRSDGP 438
           LMYP+A+IPVCQLSVQT+ DG+YHYNMG+ALAPLREEGVLIIGSGSATHNLRAL+ +   
Sbjct: 120 LMYPEADIPVCQLSVQTNRDGSYHYNMGRALAPLREEGVLIIGSGSATHNLRALNPNSES 179

Query: 437 VVSWAEEFDTWLKESLINGRHEDVNNYETKAPFAKKVHPWPDHFYPLHVALGAAGENAKA 258
           VV WA EFDTWLKE+L++GR+ED+N+YE KAP A++ HPWP+HFYPLHVA+GAAGENAKA
Sbjct: 180 VVPWAYEFDTWLKEALLDGRYEDINHYEEKAPHAREAHPWPEHFYPLHVAMGAAGENAKA 239

Query: 257 ELIHHSWSLGSLSYASYRFKT 195
           +LIHHSWSLG+LSYASY+F T
Sbjct: 240 KLIHHSWSLGTLSYASYQFTT 260


>ref|XP_002267696.2| PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein-like [Vitis
           vinifera] gi|296084824|emb|CBI27706.3| unnamed protein
           product [Vitis vinifera]
          Length = 266

 Score =  435 bits (1118), Expect = e-119
 Identities = 205/264 (77%), Positives = 231/264 (87%), Gaps = 3/264 (1%)
 Frame = -2

Query: 977 MDTFFISHGSPTLSIDDSLPARHFLKSWEDKVFQEKPKSILVISGHWETSEPTVNVINGP 798
           MDTF+ISHGSPTLSID+SLPARHFLKSW +KV  + P SILVISGHWET EPTVNV+   
Sbjct: 1   MDTFYISHGSPTLSIDESLPARHFLKSWREKVMGQPPTSILVISGHWETHEPTVNVVPR- 59

Query: 797 NDTIYDFYGFPKPMYQLKYPAPGAPELAMRAKELLLASGFNCVKEDKARGLDHGAWVPIM 618
           NDTIYDFYGFPKPMY+ KYPAPGAPELA R KELL+AS F CV EDK RGLDHGAWVP+M
Sbjct: 60  NDTIYDFYGFPKPMYEFKYPAPGAPELAKRVKELLMASDFKCVNEDKERGLDHGAWVPLM 119

Query: 617 LMYPKANIPVCQLSVQTDMDGAYHYNMGKALAPLREEGVLIIGSGSATHNLRALDR---S 447
           LMYP+A+IPVCQLSVQT+ DG+YHYNMGKALAPLREEGVLI GSGSATHNLR ++R   S
Sbjct: 120 LMYPEADIPVCQLSVQTNRDGSYHYNMGKALAPLREEGVLIFGSGSATHNLRTINRNSDS 179

Query: 446 DGPVVSWAEEFDTWLKESLINGRHEDVNNYETKAPFAKKVHPWPDHFYPLHVALGAAGEN 267
              VV WA EFDTWLKE+L++GR+EDVN YE KAP A++ HPWPDHFYPLHVA+GAAG++
Sbjct: 180 KAAVVPWAYEFDTWLKEALLDGRYEDVNCYEEKAPHAREAHPWPDHFYPLHVAMGAAGKD 239

Query: 266 AKAELIHHSWSLGSLSYASYRFKT 195
           AKA+LIHHSWS G+LSYASY+F T
Sbjct: 240 AKAKLIHHSWSFGTLSYASYQFTT 263


>emb|CAN83326.1| hypothetical protein VITISV_013290 [Vitis vinifera]
          Length = 266

 Score =  428 bits (1100), Expect = e-117
 Identities = 202/264 (76%), Positives = 228/264 (86%), Gaps = 3/264 (1%)
 Frame = -2

Query: 977 MDTFFISHGSPTLSIDDSLPARHFLKSWEDKVFQEKPKSILVISGHWETSEPTVNVINGP 798
           MDTF+ISHGSPTLSID+SLPARHFLKSW +KV  + P SILVISGHWET EPTVNV+   
Sbjct: 1   MDTFYISHGSPTLSIDESLPARHFLKSWREKVMGQPPTSILVISGHWETHEPTVNVVPR- 59

Query: 797 NDTIYDFYGFPKPMYQLKYPAPGAPELAMRAKELLLASGFNCVKEDKARGLDHGAWVPIM 618
           NDTIYDFYGFPKPMY+ KYPAPGAPELA R K LL AS F CV EDK RGLDHGAWVP+M
Sbjct: 60  NDTIYDFYGFPKPMYEXKYPAPGAPELAKRVKXLLXASDFKCVNEDKERGLDHGAWVPLM 119

Query: 617 LMYPKANIPVCQLSVQTDMDGAYHYNMGKALAPLREEGVLIIGSGSATHNLRALDRSD-- 444
           LMYP+A+IPVCQLSVQT+ DG+YHYNMGKALAPLREEGVLI GSGSATHNLR ++R+   
Sbjct: 120 LMYPEADIPVCQLSVQTNRDGSYHYNMGKALAPLREEGVLIFGSGSATHNLRTINRNSDX 179

Query: 443 -GPVVSWAEEFDTWLKESLINGRHEDVNNYETKAPFAKKVHPWPDHFYPLHVALGAAGEN 267
              VV WA EFDTWLKE+L++GR+EDVN YE KAP A++ HPWPDHFYPLHVA+GAAG++
Sbjct: 180 KAAVVPWAYEFDTWLKEALLDGRYEDVNCYEEKAPHAREAHPWPDHFYPLHVAMGAAGKD 239

Query: 266 AKAELIHHSWSLGSLSYASYRFKT 195
           AKA+LIHHSWS G+LSYA Y+F T
Sbjct: 240 AKAKLIHHSWSFGTLSYAFYQFTT 263


>tpg|DAA56548.1| TPA: hypothetical protein ZEAMMB73_133109 [Zea mays]
          Length = 319

 Score =  423 bits (1088), Expect = e-116
 Identities = 198/269 (73%), Positives = 223/269 (82%), Gaps = 2/269 (0%)
 Frame = -2

Query: 992 RLSSCMDTFFISHGSPTLSIDDSLPARHFLKSWEDKVF--QEKPKSILVISGHWETSEPT 819
           R+ + MDTFF+SHGSPTLSIDDS+PARHF KSW        + P++ILV+SGHWET+ P 
Sbjct: 50  RVPATMDTFFLSHGSPTLSIDDSIPARHFFKSWVPAKVAGDQPPRAILVVSGHWETATPA 109

Query: 818 VNVINGPNDTIYDFYGFPKPMYQLKYPAPGAPELAMRAKELLLASGFNCVKEDKARGLDH 639
           VNVI G NDTIYDFYGFPKPMYQLKYPAPGAP+LA+R  ELL  +GF  VK+D +RGLDH
Sbjct: 110 VNVIRGSNDTIYDFYGFPKPMYQLKYPAPGAPDLALRTVELLEQAGFGPVKQDHSRGLDH 169

Query: 638 GAWVPIMLMYPKANIPVCQLSVQTDMDGAYHYNMGKALAPLREEGVLIIGSGSATHNLRA 459
           GAWVP+MLMYP A+IPVCQLSVQTD DG YHYN+GKALAPLREEG LIIGSGSATHNLR 
Sbjct: 170 GAWVPLMLMYPDASIPVCQLSVQTDRDGTYHYNLGKALAPLREEGTLIIGSGSATHNLRK 229

Query: 458 LDRSDGPVVSWAEEFDTWLKESLINGRHEDVNNYETKAPFAKKVHPWPDHFYPLHVALGA 279
           +  SD PV  WA EFDTWLK+SL+NGR+EDV  YE KAP A+  HPWPDHFYPLHVALGA
Sbjct: 230 ISPSDAPVPQWAAEFDTWLKDSLLNGRYEDVKRYEEKAPHARVAHPWPDHFYPLHVALGA 289

Query: 278 AGENAKAELIHHSWSLGSLSYASYRFKTD 192
           AG+ AKAE IH  WS G+LSYASYRF T+
Sbjct: 290 AGDGAKAEQIHQCWSNGTLSYASYRFTTN 318


>ref|XP_002458858.1| hypothetical protein SORBIDRAFT_03g041600 [Sorghum bicolor]
           gi|241930833|gb|EES03978.1| hypothetical protein
           SORBIDRAFT_03g041600 [Sorghum bicolor]
          Length = 321

 Score =  418 bits (1075), Expect = e-114
 Identities = 193/267 (72%), Positives = 220/267 (82%), Gaps = 2/267 (0%)
 Frame = -2

Query: 986 SSCMDTFFISHGSPTLSIDDSLPARHFLKSWEDKVF--QEKPKSILVISGHWETSEPTVN 813
           ++ MDTFF+SHGSPTLSIDD +PARHF KSW        + P++ILV+SGHWET+ P VN
Sbjct: 54  ATTMDTFFLSHGSPTLSIDDKIPARHFFKSWVPAKVAGDQAPRAILVVSGHWETATPAVN 113

Query: 812 VINGPNDTIYDFYGFPKPMYQLKYPAPGAPELAMRAKELLLASGFNCVKEDKARGLDHGA 633
           VI G NDTIYDFYGFPKPMYQLKYPAPGAP+LA+R KELL  +GF  VKED +RGLDHGA
Sbjct: 114 VIRGSNDTIYDFYGFPKPMYQLKYPAPGAPDLALRTKELLEQAGFGPVKEDHSRGLDHGA 173

Query: 632 WVPIMLMYPKANIPVCQLSVQTDMDGAYHYNMGKALAPLREEGVLIIGSGSATHNLRALD 453
           WVP+MLMYP ANIPVCQLSVQ+D DG YHYN+GKALAPLREEG+LI+GSGSATHNLR + 
Sbjct: 174 WVPLMLMYPDANIPVCQLSVQSDRDGTYHYNLGKALAPLREEGILIVGSGSATHNLRKMG 233

Query: 452 RSDGPVVSWAEEFDTWLKESLINGRHEDVNNYETKAPFAKKVHPWPDHFYPLHVALGAAG 273
             D PV  W  EFDTWLK+SL+ GR+EDVN YE KAP  +  HPWPDHFYPLHVALGAAG
Sbjct: 234 PFDAPVPRWVAEFDTWLKDSLLGGRYEDVNRYEEKAPHGRAAHPWPDHFYPLHVALGAAG 293

Query: 272 ENAKAELIHHSWSLGSLSYASYRFKTD 192
           + AKAE IHH W+  +LSYASYRF T+
Sbjct: 294 DAAKAEQIHHCWTNATLSYASYRFTTN 320


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