BLASTX nr result

ID: Coptis24_contig00002173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002173
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276587.1| PREDICTED: uncharacterized protein LOC100244...   155   3e-35
emb|CAN80259.1| hypothetical protein VITISV_034223 [Vitis vinifera]   149   1e-33
ref|XP_003520698.1| PREDICTED: uncharacterized protein LOC100797...   125   2e-26
ref|XP_002528759.1| conserved hypothetical protein [Ricinus comm...   122   2e-25
ref|XP_004149202.1| PREDICTED: uncharacterized protein LOC101204...   120   7e-25

>ref|XP_002276587.1| PREDICTED: uncharacterized protein LOC100244210 [Vitis vinifera]
          Length = 320

 Score =  155 bits (391), Expect = 3e-35
 Identities = 100/289 (34%), Positives = 138/289 (47%), Gaps = 15/289 (5%)
 Frame = -1

Query: 1068 SQVDQETPYFPPESYCVSKEDEYDWYDRNAVYERXXXXXXXXXXXXXXXXXXXXXXXK-- 895
            + + +  P FPPES+ +SK+ E DW+DRNA YER                          
Sbjct: 37   TDLPEVAPDFPPESFWLSKDAELDWFDRNAFYERKESTKGNSTSTNLNPNHNSHSNSSSQ 96

Query: 894  RYSINLKSKASIIGLPKPQKTCYLDRKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSP 715
            R+S+NLKSKASIIGLPKPQK CY D K+  N   SN R F K+   +  + VP+ EPSSP
Sbjct: 97   RFSLNLKSKASIIGLPKPQKPCYTDAKTRRNCRASNTRLFLKRTEPTGKSAVPMAEPSSP 156

Query: 714  KVSCIGXXXXXXXXXXXXXXXXRTKENNSTIPP-------LKRNNNKEKKLGLWRSFKDA 556
            KVSC+G                R+ ++ + +         ++  + K KK G W++ K  
Sbjct: 157  KVSCMGRVRSKKDRSRRLRNRQRSIKSPAEMATVAAEAKMIRSKSGKHKKGGFWKNLKSI 216

Query: 555  LHLGRGRQTAAVDDQETVVKPLTVVKSEKCNVYVDESVTMSESTGLGGMKRFVSGRRSDS 376
               GR +    V +      P     +    ++  E    SE   LGG++RF SGRRSDS
Sbjct: 217  FRTGRAKPIKGVPEPPKQSSPRNSFTARAREMHTSE--PESEPPTLGGVQRFASGRRSDS 274

Query: 375  FGGCGLDFDETPRGESSVLS------RRGVGPVMEVKCSREWECVGPAS 247
            +    +D  E    +S  L       RR + P  EV C R+W+  GPAS
Sbjct: 275  W----IDDVEVDVAKSESLDRDFIWRRRAMAPPKEVDCGRDWQHAGPAS 319


>emb|CAN80259.1| hypothetical protein VITISV_034223 [Vitis vinifera]
          Length = 321

 Score =  149 bits (376), Expect = 1e-33
 Identities = 100/283 (35%), Positives = 134/283 (47%), Gaps = 16/283 (5%)
 Frame = -1

Query: 1047 PYFPPESYCVSKEDEYDWYDRNAVYERXXXXXXXXXXXXXXXXXXXXXXXK--RYSINLK 874
            P FPPES+ +SK+ E DW+DRNA YER                          R+S+NLK
Sbjct: 44   PDFPPESFWLSKDAELDWFDRNAFYERKESTKGNSTSTNLNPNHNSHSNSSSQRFSLNLK 103

Query: 873  SKASIIGLPKPQKTCYLDRKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGX 694
            SKASIIGLPKPQK CY D K   N   SN R F K+   +  + VP+ EPSSPKVSC+G 
Sbjct: 104  SKASIIGLPKPQKPCYTDAKXRRNCRASNTRLFLKRTEPTGKSAVPMAEPSSPKVSCMGR 163

Query: 693  XXXXXXXXXXXXXXXRTKENNSTIPP-------LKRNNNKEKKLGLWRSFKDALHL-GRG 538
                           R+ ++ + +         ++  + K KK G W++ K      GR 
Sbjct: 164  VRSKKDRSRRLRNRQRSIKSPAEMATXAAEAKMIRSKSGKHKKGGFWKNLKSIFRTGGRA 223

Query: 537  RQTAAVDDQETVVKPLTVVKSEKCNVYVDESVTMSESTGLGGMKRFVSGRRSDSFGGCGL 358
            +    V +      P     +    ++  E    SE   LGG++RF SGRRSDS+    +
Sbjct: 224  KPIKGVPEPPKQSSPRNSFTARAREMHTSE--PESEPPTLGGVQRFASGRRSDSW----I 277

Query: 357  DFDETPRGESSVLS------RRGVGPVMEVKCSREWECVGPAS 247
            D  E    +S  L       RR + P  EV C R+W+  GPAS
Sbjct: 278  DDVEVDVAKSESLDRDFIWRRRAMAPPKEVDCGRDWQHAGPAS 320


>ref|XP_003520698.1| PREDICTED: uncharacterized protein LOC100797951 [Glycine max]
          Length = 289

 Score =  125 bits (315), Expect = 2e-26
 Identities = 88/247 (35%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
 Frame = -1

Query: 1047 PYFPPESYCVSKEDEYDWYDRNAVYERXXXXXXXXXXXXXXXXXXXXXXXKRYSINLKSK 868
            P  PPES+ +S+++EYDW+DRNAVYER                        R+S+N KSK
Sbjct: 39   PDSPPESFWLSRDEEYDWWDRNAVYER--------KESTKASNNNSTNLNPRFSLNFKSK 90

Query: 867  AS-IIGLPKPQKTCYLDRKS-CNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGX 694
            AS IIGLPKPQKT ++D K+  N+  PSN+R FPK+      +     EPSSPKVSC+G 
Sbjct: 91   ASTIIGLPKPQKTSFVDAKNRRNHNKPSNIRLFPKRSVSVGKSESGFVEPSSPKVSCMGR 150

Query: 693  XXXXXXXXXXXXXXXRTKENNSTIPPLKRNNNKEKKLGLWRSFKDALHLG------RGRQ 532
                           ++  N       ++ N   KK G + SF+     G      R + 
Sbjct: 151  VRSKRDRNRKLRSSRKSSPNTDA---KEKPNRNGKKYGFFESFRSIFRSGRKDKSDRKKT 207

Query: 531  TAAVDDQETVVKPLTVVKSEKC--------NVYVDE-----SVTMSESTGLGGMKRFVSG 391
                 D     K   +  S +          V ++E     SV+ SE  GLGGM RF SG
Sbjct: 208  DLLATDSNIETKSGAINYSSRARHSTSSLNEVSLEEPVSRNSVSESEPPGLGGMMRFASG 267

Query: 390  RRSDSFG 370
            RRS+S+G
Sbjct: 268  RRSESWG 274


>ref|XP_002528759.1| conserved hypothetical protein [Ricinus communis]
            gi|223531853|gb|EEF33671.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 291

 Score =  122 bits (306), Expect = 2e-25
 Identities = 84/238 (35%), Positives = 118/238 (49%), Gaps = 13/238 (5%)
 Frame = -1

Query: 1047 PYFPPESYCVSKEDEYDWYDRNAVYERXXXXXXXXXXXXXXXXXXXXXXXKRYSINLKSK 868
            P FPPES+ +SK+ E+DW+DRNA  ER                       +R+S NLKSK
Sbjct: 55   PDFPPESFWLSKDAEHDWFDRNAFIERKDSTKGNSHSTNLNPNINPNSNSQRFS-NLKSK 113

Query: 867  ASIIGLPKPQKTCYLD-RKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGXX 691
             SIIGLPKPQK+C++D R+ C    P+N R FPK+    + ++  L EPSSPKVSC+G  
Sbjct: 114  PSIIGLPKPQKSCFVDARRHCK---PANTRLFPKRSGSVSKSDSSLIEPSSPKVSCMGRV 170

Query: 690  XXXXXXXXXXXXXXRTKENNSTIPPLKRNNNKEKKLGLWRSFK---DALHLGRGRQTAAV 520
                          ++  +N T    +R   K++  G + SF+    A   G+       
Sbjct: 171  RSKKDRNRRLKNQQQSGRSNETGGKRERPERKQRS-GFFASFRAIFRATKKGKDSSQKGK 229

Query: 519  DDQETVVKPLTVVKS---------EKCNVYVDESVTMSESTGLGGMKRFVSGRRSDSF 373
            D  +   K  TV  S         E+    ++ +    E  GLGGMKRF SGR+S+S+
Sbjct: 230  DASQESSKKTTVKTSDIRDRLPMRERGASPIEPATGGIEPVGLGGMKRFASGRKSESW 287


>ref|XP_004149202.1| PREDICTED: uncharacterized protein LOC101204080 [Cucumis sativus]
            gi|449500898|ref|XP_004161224.1| PREDICTED:
            uncharacterized LOC101204080 [Cucumis sativus]
          Length = 287

 Score =  120 bits (301), Expect = 7e-25
 Identities = 84/243 (34%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
 Frame = -1

Query: 1047 PYFPPESYCVSKEDEYDWYDRNAVYERXXXXXXXXXXXXXXXXXXXXXXXK--RYSINLK 874
            P FPPES+ +SK+ E+DW ++NA YER                          R+S+N K
Sbjct: 51   PDFPPESFWLSKDAEFDWLNQNAFYERKDSTKGSSNSTNLNPTVNPTSNSNSQRFSLNFK 110

Query: 873  SKASIIGLPKPQKTCYLDRKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGX 694
            SKASI+GLPK  KTC++D KS  N    N R FPKQ   S  ++  L EPSSPKVSC+G 
Sbjct: 111  SKASILGLPKLHKTCFVDSKSRRNAKSGNTRLFPKQSGSSEKSDSALVEPSSPKVSCMGR 170

Query: 693  XXXXXXXXXXXXXXXRTKENNSTIPPLKRNNNKEKKLGLWRSFKDALHLGRGRQTAAVDD 514
                           R+ E     PP ++   K+ + G   +F++     +         
Sbjct: 171  VRSKRDRSRRWKNRRRSCE---PAPPKEKPERKDTEPGFLCTFRNLFRCWK--------- 218

Query: 513  QETVVKP--------LTVVKSEKCNVYVDESVTMS--------ESTGLGGMKRFVSGRRS 382
            +  VVKP        L +  S+K  + +D     S        E  GLGG+KRF SGRRS
Sbjct: 219  KTPVVKPTAPDSGDSLAMKASDKIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRS 278

Query: 381  DSF 373
             S+
Sbjct: 279  GSW 281


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