BLASTX nr result
ID: Coptis24_contig00002120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002120 (275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFM35697.1| SGT1 [Vitis pseudoreticulata] 115 5e-24 ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinif... 115 5e-24 ref|XP_003548149.1| PREDICTED: protein SGT1 homolog B-like [Glyc... 110 9e-23 ref|NP_001236585.1| SGT1-2 [Glycine max] gi|208964720|gb|ACI3155... 110 9e-23 gb|ABH03406.1| SGT1 [Pelargonium x hortorum] 110 2e-22 >gb|AFM35697.1| SGT1 [Vitis pseudoreticulata] Length = 361 Score = 115 bits (287), Expect = 5e-24 Identities = 59/91 (64%), Positives = 71/91 (78%) Frame = -3 Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94 P+ CRY VLSTKIE+RLAKAE I+WTSLEF+KE V Q++N S++ + RPTYPS SK+ Sbjct: 219 PDKCRYEVLSTKIEIRLAKAEEIHWTSLEFSKENTVPQRINVSTSVASQRPTYPS--SKT 276 Query: 93 RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1 R V+WDK+EAQV KLDGDAALNKFF Sbjct: 277 RMVDWDKLEAQVKKEEKEEKLDGDAALNKFF 307 >ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinifera] gi|302143763|emb|CBI22624.3| unnamed protein product [Vitis vinifera] Length = 361 Score = 115 bits (287), Expect = 5e-24 Identities = 59/91 (64%), Positives = 71/91 (78%) Frame = -3 Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94 P+ CRY VLSTKIE+RLAKAE I+WTSLEF+KE V Q++N S++ + RPTYPS SK+ Sbjct: 219 PDKCRYEVLSTKIEIRLAKAEEIHWTSLEFSKENTVPQRINVSTSVASQRPTYPS--SKT 276 Query: 93 RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1 R V+WDK+EAQV KLDGDAALNKFF Sbjct: 277 RMVDWDKLEAQVKKEEKEEKLDGDAALNKFF 307 >ref|XP_003548149.1| PREDICTED: protein SGT1 homolog B-like [Glycine max] Length = 359 Score = 110 bits (276), Expect = 9e-23 Identities = 59/91 (64%), Positives = 67/91 (73%) Frame = -3 Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94 P NCRY VLSTKIE+RLAKAE I+WTSLEFT + VV Q++N SS + RP+YPSSK Sbjct: 218 PSNCRYEVLSTKIEIRLAKAEPIHWTSLEFTTDIVVPQRVNASSVTGSQRPSYPSSKQTR 277 Query: 93 RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1 +WDKIEAQV KLDGDAALNKFF Sbjct: 278 ---DWDKIEAQVKKEEKDEKLDGDAALNKFF 305 >ref|NP_001236585.1| SGT1-2 [Glycine max] gi|208964720|gb|ACI31550.1| SGT1-2 [Glycine max] Length = 359 Score = 110 bits (276), Expect = 9e-23 Identities = 58/91 (63%), Positives = 68/91 (74%) Frame = -3 Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94 P NC+Y VLSTKIE+RLAKAE I+WTSLEFT++ VV Q++N SS + RP+YPSSK Sbjct: 218 PSNCQYEVLSTKIEIRLAKAEPIHWTSLEFTRDIVVQQRVNASSVTGSQRPSYPSSKQTR 277 Query: 93 RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1 +WDKIEAQV KLDGDAALNKFF Sbjct: 278 ---DWDKIEAQVKKEEKDEKLDGDAALNKFF 305 >gb|ABH03406.1| SGT1 [Pelargonium x hortorum] Length = 367 Score = 110 bits (274), Expect = 2e-22 Identities = 60/91 (65%), Positives = 67/91 (73%) Frame = -3 Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94 P CRY VLSTKIE+RLAKAEAINWTSLEF+KE VV+QK S + RPTYPS SK Sbjct: 225 PSKCRYEVLSTKIEIRLAKAEAINWTSLEFSKEIVVTQKAIVSPGVGSYRPTYPS--SKP 282 Query: 93 RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1 R +WDK+EA+V KLDGDAALNKFF Sbjct: 283 RLTDWDKLEAEVKKEEKEEKLDGDAALNKFF 313