BLASTX nr result

ID: Coptis24_contig00002120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002120
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM35697.1| SGT1 [Vitis pseudoreticulata]                          115   5e-24
ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinif...   115   5e-24
ref|XP_003548149.1| PREDICTED: protein SGT1 homolog B-like [Glyc...   110   9e-23
ref|NP_001236585.1| SGT1-2 [Glycine max] gi|208964720|gb|ACI3155...   110   9e-23
gb|ABH03406.1| SGT1 [Pelargonium x hortorum]                          110   2e-22

>gb|AFM35697.1| SGT1 [Vitis pseudoreticulata]
          Length = 361

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/91 (64%), Positives = 71/91 (78%)
 Frame = -3

Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94
           P+ CRY VLSTKIE+RLAKAE I+WTSLEF+KE  V Q++N S++  + RPTYPS  SK+
Sbjct: 219 PDKCRYEVLSTKIEIRLAKAEEIHWTSLEFSKENTVPQRINVSTSVASQRPTYPS--SKT 276

Query: 93  RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1
           R V+WDK+EAQV       KLDGDAALNKFF
Sbjct: 277 RMVDWDKLEAQVKKEEKEEKLDGDAALNKFF 307


>ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinifera]
           gi|302143763|emb|CBI22624.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/91 (64%), Positives = 71/91 (78%)
 Frame = -3

Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94
           P+ CRY VLSTKIE+RLAKAE I+WTSLEF+KE  V Q++N S++  + RPTYPS  SK+
Sbjct: 219 PDKCRYEVLSTKIEIRLAKAEEIHWTSLEFSKENTVPQRINVSTSVASQRPTYPS--SKT 276

Query: 93  RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1
           R V+WDK+EAQV       KLDGDAALNKFF
Sbjct: 277 RMVDWDKLEAQVKKEEKEEKLDGDAALNKFF 307


>ref|XP_003548149.1| PREDICTED: protein SGT1 homolog B-like [Glycine max]
          Length = 359

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/91 (64%), Positives = 67/91 (73%)
 Frame = -3

Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94
           P NCRY VLSTKIE+RLAKAE I+WTSLEFT + VV Q++N SS   + RP+YPSSK   
Sbjct: 218 PSNCRYEVLSTKIEIRLAKAEPIHWTSLEFTTDIVVPQRVNASSVTGSQRPSYPSSKQTR 277

Query: 93  RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1
              +WDKIEAQV       KLDGDAALNKFF
Sbjct: 278 ---DWDKIEAQVKKEEKDEKLDGDAALNKFF 305


>ref|NP_001236585.1| SGT1-2 [Glycine max] gi|208964720|gb|ACI31550.1| SGT1-2 [Glycine
           max]
          Length = 359

 Score =  110 bits (276), Expect = 9e-23
 Identities = 58/91 (63%), Positives = 68/91 (74%)
 Frame = -3

Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94
           P NC+Y VLSTKIE+RLAKAE I+WTSLEFT++ VV Q++N SS   + RP+YPSSK   
Sbjct: 218 PSNCQYEVLSTKIEIRLAKAEPIHWTSLEFTRDIVVQQRVNASSVTGSQRPSYPSSKQTR 277

Query: 93  RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1
              +WDKIEAQV       KLDGDAALNKFF
Sbjct: 278 ---DWDKIEAQVKKEEKDEKLDGDAALNKFF 305


>gb|ABH03406.1| SGT1 [Pelargonium x hortorum]
          Length = 367

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/91 (65%), Positives = 67/91 (73%)
 Frame = -3

Query: 273 PENCRYLVLSTKIEVRLAKAEAINWTSLEFTKEQVVSQKLNTSSAGEAGRPTYPSSKSKS 94
           P  CRY VLSTKIE+RLAKAEAINWTSLEF+KE VV+QK   S    + RPTYPS  SK 
Sbjct: 225 PSKCRYEVLSTKIEIRLAKAEAINWTSLEFSKEIVVTQKAIVSPGVGSYRPTYPS--SKP 282

Query: 93  RGVNWDKIEAQVXXXXXXXKLDGDAALNKFF 1
           R  +WDK+EA+V       KLDGDAALNKFF
Sbjct: 283 RLTDWDKLEAEVKKEEKEEKLDGDAALNKFF 313


Top