BLASTX nr result

ID: Coptis24_contig00002109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002109
         (1834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|2...   591   e-166
ref|XP_002281840.1| PREDICTED: armadillo repeat-containing prote...   589   e-166
ref|XP_004165806.1| PREDICTED: armadillo repeat-containing prote...   573   e-161
ref|XP_004136992.1| PREDICTED: armadillo repeat-containing prote...   573   e-161
gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK...   572   e-160

>ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|222871351|gb|EEF08482.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  591 bits (1524), Expect = e-166
 Identities = 302/462 (65%), Positives = 382/462 (82%), Gaps = 1/462 (0%)
 Frame = +1

Query: 112  MGPLKNNNKRTISQEAFEVVVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGV 291
            MGP  + N RTISQEAF+ +VKENIEDL +DP EAL+DAI TLTLQGVDLSGIVTC+PG 
Sbjct: 1    MGP-PSKNVRTISQEAFDELVKENIEDLGLDPTEALEDAIQTLTLQGVDLSGIVTCVPGE 59

Query: 292  TSVNDNPVIQCLDQLKELVDHNDSNLKEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLDL 471
             +V +NPVI+CL++LKEL   +D +L E+V +LD L  L +  + S NV+I +RNGGL+L
Sbjct: 60   GNVRENPVIKCLERLKEL-GFDDDDLDEMVGLLDELVGLFTGVEGSGNVAIGVRNGGLEL 118

Query: 472  LISICSKFKL-RQRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEKIDVVN 648
            + SICS   +  ++VLVSA K +++LI D+QSTE+FR +DGPK+V+ IL   SE ++V+N
Sbjct: 119  VCSICSNIPIVSEKVLVSALKTLALLIHDVQSTEMFRSSDGPKMVVGILKGGSESLEVLN 178

Query: 649  SGFAVVAAAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVL 828
            +GFAVVAAAATGNEVVK+L ++LK+DEL++++L  ++K  ++  YD+IRVLLT DD RV+
Sbjct: 179  TGFAVVAAAATGNEVVKELLIELKIDELILEVLNRQSKGIIQGLYDSIRVLLTPDDNRVV 238

Query: 829  ASQVYGYARTFAKIGITESLVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVD 1008
            ASQVYGYAR FAKIGI  +LV +L  G++SP+L+SA+IALKAVAVNDEIC+SIA++GG+D
Sbjct: 239  ASQVYGYARRFAKIGIARALVESLRSGLTSPSLVSASIALKAVAVNDEICKSIAESGGID 298

Query: 1009 AVLKCIDDSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSFRLSEDPSV 1188
             + KCIDDSGE  N  VARACCSLLSKLAGSD+NKS+IV+K GM++LI+L+ R S+DPSV
Sbjct: 299  VIFKCIDDSGEHGNKIVARACCSLLSKLAGSDSNKSAIVEKEGMNKLIQLAARFSDDPSV 358

Query: 1189 LQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNLVVRNP 1368
            LQE+MSI   L LRSP NAA A+EAGAGD AIQAM+KF    Q+Q+ SCLMIRNLV RNP
Sbjct: 359  LQEVMSIFTVLCLRSPDNAARAMEAGAGDLAIQAMEKFSNVQQLQRSSCLMIRNLVARNP 418

Query: 1369 ENRSILLGNGIEKIIRKAKENHESCKDAATDALRDLGLDNYN 1494
            ENR++LL +GIEKIIR+AK NHE+CKDAATDALRDLGLDNYN
Sbjct: 419  ENRTLLLSHGIEKIIRRAKVNHETCKDAATDALRDLGLDNYN 460


>ref|XP_002281840.1| PREDICTED: armadillo repeat-containing protein 6 [Vitis vinifera]
            gi|297741329|emb|CBI32460.3| unnamed protein product
            [Vitis vinifera]
          Length = 460

 Score =  589 bits (1519), Expect = e-166
 Identities = 306/455 (67%), Positives = 371/455 (81%), Gaps = 3/455 (0%)
 Frame = +1

Query: 139  RTISQEAFEVVVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGVTSVNDNPVI 318
            RTISQ AF+ +V+EN+EDL M+P EAL+DA+ TLTLQGVDLSGIV C+PG  SV DNPVI
Sbjct: 8    RTISQAAFDELVRENMEDLGMEPAEALEDALQTLTLQGVDLSGIVACVPGDGSVGDNPVI 67

Query: 319  QCLDQLKELVDHNDSNLKEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLDLLISICSKFK 498
            Q LD+LK+L D +     E+V V D L  LCS++  S N +IA RNGG++++ S+CSK +
Sbjct: 68   QSLDRLKQL-DSDWVGFGEMVEVFDKLTELCSIE-GSDNAAIATRNGGVEVVCSVCSKIR 125

Query: 499  LR---QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEKIDVVNSGFAVVA 669
            +      VLVS    M+ L+ D+QSTE F+K  GPKIV+ +L++ S+ +D++NSGF+VVA
Sbjct: 126  VGCEGDSVLVSGLTTMASLLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVA 185

Query: 670  AAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVLASQVYGY 849
            AAATGNE++K+ FMDL++DEL++QI+    +  +   YDAI VLLT DD RV+ASQVYGY
Sbjct: 186  AAATGNEILKESFMDLQIDELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGY 245

Query: 850  ARTFAKIGITESLVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVDAVLKCID 1029
            AR FAK GI  +LV +L +G+ SP+L+SA+IALKAVAVNDEIC+SIA++GG+DAVL+CID
Sbjct: 246  ARRFAKAGIAGALVESLGEGLRSPSLVSASIALKAVAVNDEICKSIAESGGIDAVLRCID 305

Query: 1030 DSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSFRLSEDPSVLQEIMSI 1209
            DSGEQ N  VARACCSLLSKLAGSDANKS+IV+KGGMDRLIKLS R S+DPSVLQE+M I
Sbjct: 306  DSGEQGNKTVARACCSLLSKLAGSDANKSTIVEKGGMDRLIKLSARFSDDPSVLQEVMPI 365

Query: 1210 ICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNLVVRNPENRSILL 1389
             C LSLRSP NAA AVEAGAGD AIQAMQKFPAA QMQ+ SCLMIRNLVVRN ENR++LL
Sbjct: 366  FCVLSLRSPDNAARAVEAGAGDLAIQAMQKFPAAQQMQRNSCLMIRNLVVRNQENRTLLL 425

Query: 1390 GNGIEKIIRKAKENHESCKDAATDALRDLGLDNYN 1494
             NGIEKIIRKAKENHESCKDAA DALRDLGLD YN
Sbjct: 426  SNGIEKIIRKAKENHESCKDAANDALRDLGLD-YN 459


>ref|XP_004165806.1| PREDICTED: armadillo repeat-containing protein 6-like [Cucumis
            sativus]
          Length = 465

 Score =  573 bits (1478), Expect = e-161
 Identities = 295/466 (63%), Positives = 369/466 (79%), Gaps = 6/466 (1%)
 Frame = +1

Query: 112  MGPLKNNNKRTISQEAFEVVVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGV 291
            MGP K    RTISQEAF+ VV+EN+EDL MDP EALQDAI TLTLQGVDLSGIV C+PG 
Sbjct: 1    MGPPKT--LRTISQEAFDEVVRENVEDLGMDPTEALQDAIETLTLQGVDLSGIVRCVPGE 58

Query: 292  TSVNDNPVIQCLDQLKELVDHN-----DSNLKEIVNVLDNLCNLCSVQDSSSNVSIAMRN 456
             S  DNP+IQ L++LK+L   +     D  + EIV + D + +LC     S N SIA+RN
Sbjct: 59   GSARDNPLIQSLERLKQLDGDSKDKISDQFVDEIVVLFDRISDLCGSTQESGNASIALRN 118

Query: 457  GGLDLLISICSKFKLR-QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEK 633
            GGL+LL S+C K     +  +VS+ K M +L+ D+ STEIFR ++GP+IVM+IL+   + 
Sbjct: 119  GGLELLCSLCYKIPSDCEPAVVSSLKTMVLLLQDLHSTEIFRNSNGPRIVMDILNSGKQN 178

Query: 634  IDVVNSGFAVVAAAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTAD 813
            ++++  GFAVVAAAAT NEVVK++FM++ +DEL++Q L     D +   YDAIRVLLTAD
Sbjct: 179  VNILYGGFAVVAAAATANEVVKEVFMEMNIDELILQTLSTYRGDCINSLYDAIRVLLTAD 238

Query: 814  DGRVLASQVYGYARTFAKIGITESLVGALHQGISSPNLISATIALKAVAVNDEICRSIAD 993
            D RV+ASQVYGYAR FAKIGI  +LV +LH+G++S  L+SA IAL+AV+VNDEIC+SIA+
Sbjct: 239  DHRVVASQVYGYARRFAKIGIANALVDSLHEGLNSAGLVSACIALRAVSVNDEICKSIAE 298

Query: 994  NGGVDAVLKCIDDSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSFRLS 1173
            NGG+DAVL+CIDDSG+Q N  VA+ CCSLLSKLAGSDANKS+I++K G+++LIKLS R S
Sbjct: 299  NGGIDAVLRCIDDSGDQGNKMVAKVCCSLLSKLAGSDANKSAIIEKKGLNKLIKLSSRFS 358

Query: 1174 EDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNL 1353
            +DPSVLQE+M+++  L+LRSP NA  A+EAGAGD AIQAMQKFP+A QMQ+ SC MIRNL
Sbjct: 359  DDPSVLQEVMAVVSVLTLRSPENATQAIEAGAGDLAIQAMQKFPSAQQMQRNSCNMIRNL 418

Query: 1354 VVRNPENRSILLGNGIEKIIRKAKENHESCKDAATDALRDLGLDNY 1491
            VVRNPENR++LL  GIEK IRKAK+NHESCKDAA+DALRDLGLDNY
Sbjct: 419  VVRNPENRALLLKTGIEKYIRKAKQNHESCKDAASDALRDLGLDNY 464


>ref|XP_004136992.1| PREDICTED: armadillo repeat-containing protein 6-like [Cucumis
            sativus]
          Length = 465

 Score =  573 bits (1478), Expect = e-161
 Identities = 295/466 (63%), Positives = 369/466 (79%), Gaps = 6/466 (1%)
 Frame = +1

Query: 112  MGPLKNNNKRTISQEAFEVVVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGV 291
            MGP K    RTISQEAF+ VV+EN+EDL MDP EALQDAI TLTLQGVDLSGIV C+PG 
Sbjct: 1    MGPPKT--LRTISQEAFDEVVRENVEDLGMDPTEALQDAIETLTLQGVDLSGIVRCVPGE 58

Query: 292  TSVNDNPVIQCLDQLKELVDHN-----DSNLKEIVNVLDNLCNLCSVQDSSSNVSIAMRN 456
             S  DNP+IQ L++LK+L   +     D  + EIV + D + +LC     S N SIA+RN
Sbjct: 59   GSARDNPLIQSLERLKQLDGDSKDKISDQFVDEIVVLFDRISDLCGSTQESGNASIALRN 118

Query: 457  GGLDLLISICSKFKLR-QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEK 633
            GGL+LL S+C K     +  +VS+ K M +L+ D+ STEIFR ++GP+IVM+IL+   + 
Sbjct: 119  GGLELLCSLCYKIPSDCEPAVVSSLKTMVLLLQDLHSTEIFRNSNGPRIVMDILNSGKQN 178

Query: 634  IDVVNSGFAVVAAAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTAD 813
            ++++  GFAVVAAAAT NEVVK++FM++ +DEL++Q L     D +   YDAIRVLLTAD
Sbjct: 179  VNILYGGFAVVAAAATANEVVKEVFMEMNIDELILQTLSTYRGDCINSLYDAIRVLLTAD 238

Query: 814  DGRVLASQVYGYARTFAKIGITESLVGALHQGISSPNLISATIALKAVAVNDEICRSIAD 993
            D RV+ASQVYGYAR FAKIGI  +LV +LH+G++S  L+SA IAL+AV+VNDEIC+SIA+
Sbjct: 239  DHRVVASQVYGYARRFAKIGIANALVDSLHEGLNSSGLVSACIALRAVSVNDEICKSIAE 298

Query: 994  NGGVDAVLKCIDDSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSFRLS 1173
            NGG+DAVL+CIDDSG+Q N  VA+ CCSLLSKLAGSDANKS+I++K G+++LIKLS R S
Sbjct: 299  NGGIDAVLRCIDDSGDQGNKMVAKVCCSLLSKLAGSDANKSAIIEKKGLNKLIKLSSRFS 358

Query: 1174 EDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNL 1353
            +DPSVLQE+M+++  L+LRSP NA  A+EAGAGD AIQAMQKFP+A QMQ+ SC MIRNL
Sbjct: 359  DDPSVLQEVMAVVSVLTLRSPENATQAIEAGAGDLAIQAMQKFPSAQQMQRNSCNMIRNL 418

Query: 1354 VVRNPENRSILLGNGIEKIIRKAKENHESCKDAATDALRDLGLDNY 1491
            VVRNPENR++LL  GIEK IRKAK+NHESCKDAA+DALRDLGLDNY
Sbjct: 419  VVRNPENRALLLKTGIEKYIRKAKQNHESCKDAASDALRDLGLDNY 464


>gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK47554.1| unknown
            [Medicago truncatula]
          Length = 459

 Score =  572 bits (1473), Expect = e-160
 Identities = 295/456 (64%), Positives = 363/456 (79%), Gaps = 3/456 (0%)
 Frame = +1

Query: 139  RTISQEAFEVVVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGVTSVNDNPVI 318
            R +SQEAF  +V ENI DL+MDP EALQDAI TLTLQGVDLSGIVT +PG      NPVI
Sbjct: 9    RAVSQEAFNDLVFENINDLEMDPTEALQDAIQTLTLQGVDLSGIVTSLPG----ESNPVI 64

Query: 319  QCLDQLKELVDHNDSNLKEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLDLLISICSKFK 498
            +CL++LK+  ++ D  L EIV V D L  LC  +D + N +IA +NGG++L+  +  K +
Sbjct: 65   ECLEKLKQF-ENEDITLDEIVEVFDKLVELCGGEDGNGNAAIATKNGGVELVCGVFEKIR 123

Query: 499  LRQR---VLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEKIDVVNSGFAVVA 669
                   VLVS   A+++L+ D+QST  F+ ++GP+I++ I+++  + IDV+NS F VVA
Sbjct: 124  SSDGSRVVLVSGLNALALLLHDVQSTGTFQNSNGPRIIIGIINDNKQNIDVLNSSFRVVA 183

Query: 670  AAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVLASQVYGY 849
            +AATG+E+VKD FM+LKVDEL+V+I+      G++  YDAIRVLLT DD RVLASQVYGY
Sbjct: 184  SAATGDEIVKDSFMELKVDELIVEIMSVHKNPGIQSLYDAIRVLLTPDDNRVLASQVYGY 243

Query: 850  ARTFAKIGITESLVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVDAVLKCID 1029
            AR FAKIGIT++LV +LH G+SSP+L+SA I LKA AVNDEIC+SIA+ GG+D VLKCID
Sbjct: 244  ARKFAKIGITDALVDSLHTGLSSPDLVSACITLKATAVNDEICKSIAEKGGIDVVLKCID 303

Query: 1030 DSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSFRLSEDPSVLQEIMSI 1209
            DSGEQ N+ VA+ CCSLLSKLAGSDANKS+IV KGGMD+LIKLS R ++DP+VLQEIMSI
Sbjct: 304  DSGEQGNTDVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARYADDPTVLQEIMSI 363

Query: 1210 ICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNLVVRNPENRSILL 1389
            I  LSLRSP NAA A+EAGAGD AIQAMQKFPAA QMQ+ SCLMIRNLV RNPENR+ILL
Sbjct: 364  ISVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNSCLMIRNLVARNPENRTILL 423

Query: 1390 GNGIEKIIRKAKENHESCKDAATDALRDLGLDNYNV 1497
             NGIEK IRKAK+ H +CK+AATDALRDLGLD+YN+
Sbjct: 424  NNGIEKHIRKAKQTHANCKEAATDALRDLGLDSYNL 459


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