BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002072
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 i...   177   6e-43
emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]   174   5e-42
ref|XP_003518925.1| PREDICTED: RAN GTPase-activating protein 1-l...   172   3e-41
ref|XP_003536523.1| PREDICTED: RAN GTPase-activating protein 1-l...   170   1e-40
ref|XP_002281311.1| PREDICTED: RAN GTPase-activating protein 2 [...   169   2e-40

>ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 isoform 2 [Vitis
           vinifera] gi|225436922|ref|XP_002274973.1| PREDICTED:
           RAN GTPase-activating protein 1 isoform 1 [Vitis
           vinifera]
          Length = 541

 Score =  177 bits (450), Expect = 6e-43
 Identities = 95/142 (66%), Positives = 112/142 (78%), Gaps = 2/142 (1%)
 Frame = -3

Query: 423 NFQ-RSISIKLWPPSQSTRVVLVERIVKNLSAPSIFSKRYGLLNKEEAEENAKHIEDTAF 247
           NFQ R +SIKLWPPSQSTR++LVER+ KNL+ PSI S++YGLL +EEAEE AK IED AF
Sbjct: 7   NFQHRKMSIKLWPPSQSTRLMLVERMTKNLTTPSILSRKYGLLMREEAEEYAKEIEDAAF 66

Query: 246 AAANEHYEREPDGDGSSAVQLYAKESSKLMMEVLKRGPQT-VDREVSVDKDIPSTLKTVF 70
           A AN+HYE+EPDGDGSSAVQLYAKESSKLM+E+LKRGP+T  D EV   +   S L+TVF
Sbjct: 67  ATANQHYEKEPDGDGSSAVQLYAKESSKLMLEILKRGPKTKEDGEVMTAEQTTSPLETVF 126

Query: 69  DISKGKRANIXXXXXXXXLRPL 4
           DIS G+RA I        L+PL
Sbjct: 127 DISGGRRAFIDAEEAEELLKPL 148


>emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]
          Length = 541

 Score =  174 bits (442), Expect = 5e-42
 Identities = 94/142 (66%), Positives = 111/142 (78%), Gaps = 2/142 (1%)
 Frame = -3

Query: 423 NFQ-RSISIKLWPPSQSTRVVLVERIVKNLSAPSIFSKRYGLLNKEEAEENAKHIEDTAF 247
           NFQ R +SIKLW PSQSTR++LVER+ KNL+ PSI S++YGLL +EEAEE AK IED AF
Sbjct: 7   NFQHRKMSIKLWAPSQSTRLMLVERMTKNLTTPSILSRKYGLLMREEAEEYAKEIEDAAF 66

Query: 246 AAANEHYEREPDGDGSSAVQLYAKESSKLMMEVLKRGPQT-VDREVSVDKDIPSTLKTVF 70
           A AN+HYE+EPDGDGSSAVQLYAKESSKLM+E+LKRGP+T  D EV   +   S L+TVF
Sbjct: 67  ATANQHYEKEPDGDGSSAVQLYAKESSKLMLEILKRGPKTKEDGEVMTAEQTTSPLETVF 126

Query: 69  DISKGKRANIXXXXXXXXLRPL 4
           DIS G+RA I        L+PL
Sbjct: 127 DISGGRRAFIDAEEAEELLKPL 148


>ref|XP_003518925.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 533

 Score =  172 bits (435), Expect = 3e-41
 Identities = 86/137 (62%), Positives = 108/137 (78%)
 Frame = -3

Query: 414 RSISIKLWPPSQSTRVVLVERIVKNLSAPSIFSKRYGLLNKEEAEENAKHIEDTAFAAAN 235
           R ++IKLWPPSQSTR++LVER+ KNL+ PSIFS++YGLL+KEEAEE+AKHIED AFA A 
Sbjct: 11  RPLTIKLWPPSQSTRLMLVERMTKNLTTPSIFSRKYGLLSKEEAEEDAKHIEDVAFATAT 70

Query: 234 EHYEREPDGDGSSAVQLYAKESSKLMMEVLKRGPQTVDREVSVDKDIPSTLKTVFDISKG 55
           +H+E+EPDGDGSSAVQ+YAKESSKLM+E LKRGP+  +    + +   ST +TVFDIS G
Sbjct: 71  QHFEKEPDGDGSSAVQIYAKESSKLMLEALKRGPKVKEDGELITEKSGSTAETVFDISGG 130

Query: 54  KRANIXXXXXXXXLRPL 4
           +R  I        L+PL
Sbjct: 131 RRDFISGEEAAEVLKPL 147


>ref|XP_003536523.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 534

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/138 (63%), Positives = 110/138 (79%), Gaps = 1/138 (0%)
 Frame = -3

Query: 414 RSISIKLWPPSQSTRVVLVERIVKNLSAPSIFSKRYGLLNKEEAEENAKHIEDTAFAAAN 235
           R ++IKLWPPSQSTR++LVER+ KNL+ PSIFS++YGLL+KEEAEE+AKHIE+ AFA A 
Sbjct: 11  RPLTIKLWPPSQSTRLMLVERMTKNLTTPSIFSRKYGLLSKEEAEEDAKHIENVAFATAT 70

Query: 234 EHYEREPDGDGSSAVQLYAKESSKLMMEVLKRGPQT-VDREVSVDKDIPSTLKTVFDISK 58
           +H+E+EPDGDGSSAVQ+YAKESSKLM+E LKRGP+   D E+  +K   +T +TVFDIS 
Sbjct: 71  QHFEKEPDGDGSSAVQIYAKESSKLMLEALKRGPKAKEDGELINEKAAGATAETVFDISG 130

Query: 57  GKRANIXXXXXXXXLRPL 4
           G+R  I        L+PL
Sbjct: 131 GRRDFISGEETAELLKPL 148


>ref|XP_002281311.1| PREDICTED: RAN GTPase-activating protein 2 [Vitis vinifera]
          Length = 539

 Score =  169 bits (428), Expect = 2e-40
 Identities = 87/138 (63%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
 Frame = -3

Query: 414 RSISIKLWPPSQSTRVVLVERIVKNLSAPSIFSKRYGLLNKEEAEENAKHIEDTAFAAAN 235
           R+ SIKLWPPSQ+TR++LVER+  NLS PSIF+++YG L+KEEA ENAK IE+ AF+ AN
Sbjct: 11  RAFSIKLWPPSQTTRLLLVERMANNLSTPSIFTRKYGSLSKEEARENAKQIEEVAFSTAN 70

Query: 234 EHYEREPDGDGSSAVQLYAKESSKLMMEVLKRGPQT-VDREVSVDKDIPSTLKTVFDISK 58
           +HYE+EPDGDG SAVQLYAKE SKL++EVLKRGP T VD E    K      +TVFDISK
Sbjct: 71  QHYEKEPDGDGGSAVQLYAKECSKLILEVLKRGPITKVDGEEPTSKTFNEACETVFDISK 130

Query: 57  GKRANIXXXXXXXXLRPL 4
           G+RA +        LRPL
Sbjct: 131 GQRAFVEAEEAEELLRPL 148