BLASTX nr result

ID: Coptis24_contig00002051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002051
         (1641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25124.3| unnamed protein product [Vitis vinifera]              264   4e-68
ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 1...   264   4e-68
ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog...   243   8e-62
ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 1...   243   8e-62
ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ri...   241   3e-61

>emb|CBI25124.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  264 bits (675), Expect = 4e-68
 Identities = 151/307 (49%), Positives = 199/307 (64%)
 Frame = -3

Query: 1375 MEIEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 1196
            M++ +DHY +LGLPSGEEG+KL+  EI  AY+ K+L++HPDK  ++P A   F+ L  SY
Sbjct: 56   MDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKLKTSY 115

Query: 1195 KILKDEAARKLYDDLLXXXXXXXXXXXQYEREKQQREAAYGVKRRTMMNDLEERERASFA 1016
            +ILKDE ARKL+DDLL           + +RE+  R+A Y VKRR M++DLEERERA+ A
Sbjct: 116  EILKDEKARKLFDDLL-----------RVKREQFHRQAQYDVKRRRMVSDLEERERAANA 164

Query: 1015 VDPVGKXXXXXXXXXXXXXXXXXXXXAMHAKKSGMAGRKRSEPEGEKRXXXXXXGLDGEK 836
             DP  K                    AMHA K     RK +    ++       GL+ EK
Sbjct: 165  PDPASKAREEEERITKKLKEEIARIRAMHANKGASGSRKEAPGTRKESVADGGGGLNKEK 224

Query: 835  VLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMGS 656
            VLKVSWE   + Y+AE L+E+F +FGEVEDVV++S++K+   SALVVMA+K++AV A G+
Sbjct: 225  VLKVSWEKGGEDYTAEGLREVFAKFGEVEDVVLKSSRKK--GSALVVMASKEAAVAATGN 282

Query: 655  VCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKLM 476
            VCG + NPLLV+PL  A  +E    FPPR +EPEP    ++NLVGA YQ+ E S+L KL 
Sbjct: 283  VCGHISNPLLVLPLEPAVVME----FPPRSMEPEP----SSNLVGAGYQSFEESVLKKLQ 334

Query: 475  KAAEKQK 455
            KAAEKQK
Sbjct: 335  KAAEKQK 341


>ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Vitis vinifera]
          Length = 286

 Score =  264 bits (675), Expect = 4e-68
 Identities = 151/307 (49%), Positives = 199/307 (64%)
 Frame = -3

Query: 1375 MEIEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 1196
            M++ +DHY +LGLPSGEEG+KL+  EI  AY+ K+L++HPDK  ++P A   F+ L  SY
Sbjct: 1    MDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKLKTSY 60

Query: 1195 KILKDEAARKLYDDLLXXXXXXXXXXXQYEREKQQREAAYGVKRRTMMNDLEERERASFA 1016
            +ILKDE ARKL+DDLL           + +RE+  R+A Y VKRR M++DLEERERA+ A
Sbjct: 61   EILKDEKARKLFDDLL-----------RVKREQFHRQAQYDVKRRRMVSDLEERERAANA 109

Query: 1015 VDPVGKXXXXXXXXXXXXXXXXXXXXAMHAKKSGMAGRKRSEPEGEKRXXXXXXGLDGEK 836
             DP  K                    AMHA K     RK +    ++       GL+ EK
Sbjct: 110  PDPASKAREEEERITKKLKEEIARIRAMHANKGASGSRKEAPGTRKESVADGGGGLNKEK 169

Query: 835  VLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMGS 656
            VLKVSWE   + Y+AE L+E+F +FGEVEDVV++S++K+   SALVVMA+K++AV A G+
Sbjct: 170  VLKVSWEKGGEDYTAEGLREVFAKFGEVEDVVLKSSRKK--GSALVVMASKEAAVAATGN 227

Query: 655  VCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKLM 476
            VCG + NPLLV+PL  A  +E    FPPR +EPEP    ++NLVGA YQ+ E S+L KL 
Sbjct: 228  VCGHISNPLLVLPLEPAVVME----FPPRSMEPEP----SSNLVGAGYQSFEESVLKKLQ 279

Query: 475  KAAEKQK 455
            KAAEKQK
Sbjct: 280  KAAEKQK 286


>ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
            17-like [Cucumis sativus]
          Length = 290

 Score =  243 bits (621), Expect = 8e-62
 Identities = 145/308 (47%), Positives = 192/308 (62%), Gaps = 3/308 (0%)
 Frame = -3

Query: 1369 IEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASYKI 1190
            +++DHY ILGLPSGE+G+KLT  EI  AY+ K+L++HPDK  ++PNA   F+TL +SY+I
Sbjct: 1    MDVDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEI 60

Query: 1189 LKDEAARKLYDDLLXXXXXXXXXXXQYEREKQQREAAYGVKRRTMMNDLEERERASFAVD 1010
            LKDE ARKL+DDLL           + +RE+ +R++    KR+ MM DLE RER++FA D
Sbjct: 61   LKDEKARKLFDDLL-----------RVKREQHRRQSERDSKRQKMMTDLEARERSAFAPD 109

Query: 1009 PVGKXXXXXXXXXXXXXXXXXXXXAMHAKKSG---MAGRKRSEPEGEKRXXXXXXGLDGE 839
            P  K                    AMHAKK        +K +   G+K        +D E
Sbjct: 110  PAAKELEEEEXIARKLKEEIARIRAMHAKKGAPTTFPPKKETGGVGKKSDGDAGPTMDKE 169

Query: 838  KVLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMG 659
            ++LKVSWE   + Y+AE+L+E+F +FGEVEDVVIR NKK+   SA++VM++KD+AV +  
Sbjct: 170  RMLKVSWEKIGEDYTAEKLREMFSKFGEVEDVVIRHNKKK--GSAVIVMSSKDAAVASTR 227

Query: 658  SVCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKL 479
            +V GDL NPLLV+PL   + VE  S       E  P     +NLVGA YQA E SIL KL
Sbjct: 228  AVLGDLSNPLLVLPLQPVSSVEMPS------AERSPEHNRLDNLVGAGYQAFEDSILKKL 281

Query: 478  MKAAEKQK 455
             KA EKQK
Sbjct: 282  QKAGEKQK 289


>ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Cucumis sativus]
          Length = 290

 Score =  243 bits (621), Expect = 8e-62
 Identities = 144/308 (46%), Positives = 191/308 (62%), Gaps = 3/308 (0%)
 Frame = -3

Query: 1369 IEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASYKI 1190
            +++DHY ILGLPSGE+G+KLT  EI  AY+ K+L++HPDK  ++PNA   F+TL +SY+I
Sbjct: 1    MDVDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEI 60

Query: 1189 LKDEAARKLYDDLLXXXXXXXXXXXQYEREKQQREAAYGVKRRTMMNDLEERERASFAVD 1010
            LKDE ARKL+DDLL           + +RE+ +R++    KR+ MM DLE RER++FA D
Sbjct: 61   LKDEKARKLFDDLL-----------RVKREQHRRQSERDSKRQKMMTDLEARERSAFAPD 109

Query: 1009 PVGKXXXXXXXXXXXXXXXXXXXXAMHAKKSG---MAGRKRSEPEGEKRXXXXXXGLDGE 839
            P  K                    AMHAKK        +K +   G+K        +D E
Sbjct: 110  PAAKELEEEEKIARKLKEEIARIRAMHAKKGAPTTFPPKKETGGVGKKSDGDAGPTMDKE 169

Query: 838  KVLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMG 659
            ++LKVSWE   + Y+AE+L+E+F +FGEVEDVVIR NKK+   SA++VM++KD+AV +  
Sbjct: 170  RMLKVSWEKIGEDYTAEKLREMFSKFGEVEDVVIRHNKKK--GSAVIVMSSKDAAVASTR 227

Query: 658  SVCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKL 479
            +V GDL NPLLV+PL   + VE  S       E  P     +NLVGA YQA E SIL KL
Sbjct: 228  AVLGDLSNPLLVLPLQPVSSVEMPS------AERSPEHNRLDNLVGAGYQAFEDSILKKL 281

Query: 478  MKAAEKQK 455
             KA EKQK
Sbjct: 282  QKAGEKQK 289


>ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ricinus communis]
            gi|223538011|gb|EEF39624.1| Pre-mRNA-splicing factor
            cwc23, putative [Ricinus communis]
          Length = 289

 Score =  241 bits (616), Expect = 3e-61
 Identities = 150/303 (49%), Positives = 185/303 (61%)
 Frame = -3

Query: 1375 MEIEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 1196
            M+I+IDHYE+LGL SGEEG+KLT +EI  AYKKK+L++HPDK  ++P+A   F+ L +SY
Sbjct: 1    MDIDIDHYEVLGLASGEEGAKLTENEISKAYKKKALELHPDKRRDDPDAHANFQKLKSSY 60

Query: 1195 KILKDEAARKLYDDLLXXXXXXXXXXXQYEREKQQREAAYGVKRRTMMNDLEERERASFA 1016
            +ILKDE ARKL+DDLL           + +RE+         KR+ M++DLE RERA+FA
Sbjct: 61   EILKDEKARKLFDDLL-----------RVKRERYVHSFQRDSKRQKMVSDLEARERAAFA 109

Query: 1015 VDPVGKXXXXXXXXXXXXXXXXXXXXAMHAKKSGMAGRKRSEPEGEKRXXXXXXGLDGEK 836
             DPV K                    AMHA K G      S+ E            D EK
Sbjct: 110  PDPVAKAREEEDMIARKLKEEIERIRAMHANK-GAHATSASKREAVGVARESVNNTDREK 168

Query: 835  VLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMGS 656
            +LKVSWE   + YSAERLKELF +FGEVEDVVI S+KK+  RSALV MA K++AV A GS
Sbjct: 169  MLKVSWEKGGEDYSAERLKELFSKFGEVEDVVISSSKKK--RSALVQMATKEAAVAATGS 226

Query: 655  VCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKLM 476
            V GDL NPLLV+P+  A   E    FP    + E      NNLVG  Y+A E SIL+KL 
Sbjct: 227  VSGDLNNPLLVLPVKPAIATE----FPSFQQQSES--AHVNNLVGTGYKAYEDSILEKLQ 280

Query: 475  KAA 467
            KAA
Sbjct: 281  KAA 283


Top