BLASTX nr result

ID: Coptis24_contig00002041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002041
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [C...   280   2e-73
ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|2...   269   5e-70
ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis ...   258   9e-67
ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [C...   256   4e-66
ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [G...   254   1e-65

>ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]
          Length = 356

 Score =  280 bits (717), Expect = 2e-73
 Identities = 133/159 (83%), Positives = 148/159 (93%)
 Frame = +2

Query: 5   LEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALP 184
           L+VSKK+IAWKSD+E KFGS+VYPKNFQS G+IGGAKLNAS PLS+Q+DLIVWMRTAALP
Sbjct: 198 LQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTAALP 257

Query: 185 TFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTV 364
           TFRKLYG IE D EAN+ ITVVI+NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYL+V
Sbjct: 258 TFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSV 317

Query: 365 GGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGHLN 481
           GGLCLFLA++FI++YV KPRPLGDPS+LSWNRN AG  N
Sbjct: 318 GGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 356


>ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  269 bits (688), Expect = 5e-70
 Identities = 128/160 (80%), Positives = 142/160 (88%)
 Frame = +2

Query: 2   VLEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAAL 181
           VL+VSKKNIAWKSD+E KFGS+VYPKNFQS  +IGG KL++S PLSEQ DLIVWMRTAAL
Sbjct: 194 VLDVSKKNIAWKSDQEHKFGSDVYPKNFQSGSLIGGGKLDSSIPLSEQVDLIVWMRTAAL 253

Query: 182 PTFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLT 361
           P FRKLYG IE DL+AN TITV I+NNYNTYSFGGKKKLVLSTTSWIGGKN FLG AY+ 
Sbjct: 254 PNFRKLYGKIEKDLQANTTITVTIENNYNTYSFGGKKKLVLSTTSWIGGKNSFLGRAYIA 313

Query: 362 VGGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGHLN 481
           +GGLCLFLAV F+ VYV KPRPLGDPS+LSWNRNP+G +N
Sbjct: 314 IGGLCLFLAVCFVFVYVFKPRPLGDPSYLSWNRNPSGQMN 353


>ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera]
           gi|297736110|emb|CBI24148.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score =  258 bits (660), Expect = 9e-67
 Identities = 119/157 (75%), Positives = 139/157 (88%)
 Frame = +2

Query: 5   LEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALP 184
           L ++KK I+WKSD+E KFG +VYPKNFQ+  +IGGA LN S PLSEQ+DLIVWMRTAALP
Sbjct: 193 LSLNKKGISWKSDREHKFGKDVYPKNFQNGTLIGGATLNESIPLSEQEDLIVWMRTAALP 252

Query: 185 TFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTV 364
           TFRKLYG IEVDL+ N+TI V ++NNYNTYSF GKKKLVLSTTSW+GGKNDFLGIAYLTV
Sbjct: 253 TFRKLYGKIEVDLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTV 312

Query: 365 GGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGH 475
           GG+C+FLA++F +VY+ KPR LGDPS+LSWNRNP GH
Sbjct: 313 GGICIFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 349


>ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]
           gi|449475853|ref|XP_004154570.1| PREDICTED:
           ALA-interacting subunit 3-like [Cucumis sativus]
          Length = 343

 Score =  256 bits (654), Expect = 4e-66
 Identities = 117/155 (75%), Positives = 135/155 (87%)
 Frame = +2

Query: 11  VSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALPTF 190
           ++K  I+WKSD+E KFG NV+PKNFQ   + GG KLN S PLS+Q+DLIVWMRTAALPTF
Sbjct: 189 INKVGISWKSDREHKFGKNVFPKNFQKGNITGGKKLNESVPLSQQEDLIVWMRTAALPTF 248

Query: 191 RKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTVGG 370
           RKLYG IEVDLE N+ I VV++NNYNTYSF GKKKLVLSTTSW+GGKNDFLGIAYLTVGG
Sbjct: 249 RKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGG 308

Query: 371 LCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGH 475
           LC FLA++F +VY+ KPR LGDPS+LSWNRNP+GH
Sbjct: 309 LCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPSGH 343


>ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]
          Length = 344

 Score =  254 bits (650), Expect = 1e-65
 Identities = 119/157 (75%), Positives = 134/157 (85%)
 Frame = +2

Query: 5   LEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALP 184
           L V+K  I+WKSD+E KFG +V+PKNFQSS + GGA LN S PLS+Q+DLIVWMRTAALP
Sbjct: 188 LTVNKNGISWKSDREHKFGKDVFPKNFQSSAIRGGASLNESIPLSKQEDLIVWMRTAALP 247

Query: 185 TFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTV 364
           TFRKLYG IEVDL A + I V +QNNYNTYSF GKKKLVLSTTSW+GGKNDFLGIAYLTV
Sbjct: 248 TFRKLYGKIEVDLNAGDQINVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTV 307

Query: 365 GGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGH 475
           GGLC FLA++F +VY  KPR LGDPS+LSWNRNP GH
Sbjct: 308 GGLCFFLALAFTVVYFVKPRQLGDPSYLSWNRNPGGH 344


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