BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002019
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]                       226   1e-56
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu...   224   4e-56
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti...   223   1e-55
sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2     223   1e-55
gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japo...   221   4e-55

>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
          Length = 261

 Score =  226 bits (575), Expect = 1e-56
 Identities = 107/115 (93%), Positives = 113/115 (98%)
 Frame = +3

Query: 162 TVDPFAKKDWYDIKAPSLFSTRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ 341
           TVDPF+KKDWYDIKAPS+F+ RN+GKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ
Sbjct: 20  TVDPFSKKDWYDIKAPSVFTVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ 79

Query: 342 SYRKIRLRVEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 506
           SYRKIRLR EDVQG+NVLTNFWGMDFTTDKLRSLVRKWQTLIEAH+DVKTTDNYT
Sbjct: 80  SYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHIDVKTTDNYT 134



 Score =  157 bits (397), Expect = 6e-36
 Identities = 76/88 (86%), Positives = 82/88 (93%)
 Frame = +1

Query: 637 RQIRRKMMEIMVNQAQSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFVRKVKILKAP 816
           RQIRRKM EIM NQA SCDLKELVQKFIPE+IGKEIEKAT+SIYPLQNVF+RKVKILKAP
Sbjct: 162 RQIRRKMREIMTNQASSCDLKELVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAP 221

Query: 817 KFDLGKLMEVHGDYSEDVGVKVERPAEE 900
           KFDLGKLMEVHGDY ED GVK++RP E+
Sbjct: 222 KFDLGKLMEVHGDYKEDFGVKLDRPGED 249


>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
          Length = 261

 Score =  224 bits (571), Expect = 4e-56
 Identities = 107/114 (93%), Positives = 112/114 (98%)
 Frame = +3

Query: 165 VDPFAKKDWYDIKAPSLFSTRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQS 344
           VDPFAKKDWYDIKAPS+F+ RN+GKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ+
Sbjct: 21  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQA 80

Query: 345 YRKIRLRVEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 506
           YRKIRLR EDVQG+NVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT
Sbjct: 81  YRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 134



 Score =  160 bits (405), Expect = 7e-37
 Identities = 77/88 (87%), Positives = 85/88 (96%)
 Frame = +1

Query: 637 RQIRRKMMEIMVNQAQSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFVRKVKILKAP 816
           RQIRRKM EIMVNQA SCDLK+LVQKFIPE+IGKEIEKAT+SIYPLQNVF+RKVKILKAP
Sbjct: 162 RQIRRKMREIMVNQAASCDLKDLVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAP 221

Query: 817 KFDLGKLMEVHGDYSEDVGVKVERPAEE 900
           KFDLGKLMEVHGDY EDVGVK++RPA++
Sbjct: 222 KFDLGKLMEVHGDYKEDVGVKIDRPADD 249


>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
          Length = 261

 Score =  223 bits (567), Expect = 1e-55
 Identities = 107/113 (94%), Positives = 110/113 (97%)
 Frame = +3

Query: 168 DPFAKKDWYDIKAPSLFSTRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQSY 347
           DPFAKKDWYDIKAPS+FS RNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDED +Y
Sbjct: 22  DPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAY 81

Query: 348 RKIRLRVEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 506
           RKIRLR EDVQG+NVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT
Sbjct: 82  RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 134



 Score =  164 bits (415), Expect = 5e-38
 Identities = 81/90 (90%), Positives = 86/90 (95%)
 Frame = +1

Query: 637 RQIRRKMMEIMVNQAQSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFVRKVKILKAP 816
           RQIRRKM EIM  QA SCDLKELV+KFIPEMIG+EIEKATSSIYPLQNVF+RKVKILKAP
Sbjct: 162 RQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAP 221

Query: 817 KFDLGKLMEVHGDYSEDVGVKVERPAEETM 906
           KFDLGKLMEVHGDYSEDVGVK+ERPAEET+
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKMERPAEETV 251


>sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2
          Length = 234

 Score =  223 bits (567), Expect = 1e-55
 Identities = 107/113 (94%), Positives = 110/113 (97%)
 Frame = +3

Query: 168 DPFAKKDWYDIKAPSLFSTRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQSY 347
           DPFAKKDWYDIKAPS+FS RNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDED +Y
Sbjct: 22  DPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAY 81

Query: 348 RKIRLRVEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 506
           RKIRLR EDVQG+NVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT
Sbjct: 82  RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYT 134



 Score =  124 bits (312), Expect = 4e-26
 Identities = 62/69 (89%), Positives = 65/69 (94%)
 Frame = +1

Query: 637 RQIRRKMMEIMVNQAQSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFVRKVKILKAP 816
           RQIRRKM EIM  QA SCDLKELV+KFIPEMIG+EIEKATSSIYPLQNVF+RKVKILKAP
Sbjct: 162 RQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAP 221

Query: 817 KFDLGKLME 843
           KFDLGKLME
Sbjct: 222 KFDLGKLME 230


>gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
          Length = 764

 Score =  221 bits (562), Expect = 4e-55
 Identities = 105/114 (92%), Positives = 111/114 (97%)
 Frame = +3

Query: 162 TVDPFAKKDWYDIKAPSLFSTRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ 341
           TVDPFAKKDWYDIKAPS+F+ RNVGKTLVSRTQGTKIASEGLKHRVFE+SLADLQNDEDQ
Sbjct: 20  TVDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 79

Query: 342 SYRKIRLRVEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNY 503
           +YRKIRLR EDVQG+NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTDNY
Sbjct: 80  AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNY 133



 Score =  160 bits (406), Expect = 5e-37
 Identities = 79/88 (89%), Positives = 84/88 (95%)
 Frame = +1

Query: 637 RQIRRKMMEIMVNQAQSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFVRKVKILKAP 816
           RQIRRKM+EIMVNQA SCDLKELV KFIPE+IGKEIEKATSSI+PLQNVFVRKVKILKAP
Sbjct: 162 RQIRRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAP 221

Query: 817 KFDLGKLMEVHGDYSEDVGVKVERPAEE 900
           KFDLGKLMEVHGDY EDVG K+ERPAE+
Sbjct: 222 KFDLGKLMEVHGDYKEDVGTKLERPAED 249