BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002017
         (1979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532529.1| eukaryotic peptide chain release factor GTP-...   702   0.0  
ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|2...   702   0.0  
ref|XP_002319868.1| predicted protein [Populus trichocarpa] gi|2...   684   0.0  
ref|XP_003525203.1| PREDICTED: eukaryotic peptide chain release ...   684   0.0  
ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-...   683   0.0  

>ref|XP_002532529.1| eukaryotic peptide chain release factor GTP-binding subunit, putative
            [Ricinus communis] gi|223527760|gb|EEF29863.1| eukaryotic
            peptide chain release factor GTP-binding subunit,
            putative [Ricinus communis]
          Length = 497

 Score =  702 bits (1811), Expect = 0.0
 Identities = 368/512 (71%), Positives = 405/512 (79%), Gaps = 15/512 (2%)
 Frame = -3

Query: 1833 MDIEAEIQSGIRSLELDSGEQSNGVGSMDXXXXXXXXXEQPDTMXXXXXXXXXXESIPVH 1654
            MDIEA+I    RSL+LDS E++NGV + +            D            E +   
Sbjct: 1    MDIEADI----RSLQLDSAEENNGVVNPE------------DVKPVEVENVEKMEEVKGK 44

Query: 1653 XXXXXXXXXXXXXXXXXXXKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKE 1474
                               +RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKE
Sbjct: 45   EMFPAADVETPDEMEEDNKRRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKE 104

Query: 1473 AKEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETDSTRFTILDAPGHKNYVPNMISG 1294
            AKEKSRESWYMAYIMDTNEEER KGKTVEVGRAHFET++TRFTILDAPGHK+YVPNMISG
Sbjct: 105  AKEKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISG 164

Query: 1293 ASQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVGWSKE 1114
            ASQADIGVLVISARKGEFETGYE+GGQTREHVQLAKTLGVSKL+VVVNKMDDPTV WSKE
Sbjct: 165  ASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVSWSKE 224

Query: 1113 RYSEIESKMIPFLKSSGYNLKKDVLFLPISGLVGSNLKTRMEKSICPWWTGPCLFEALDS 934
            RY EIESKMIPFL+SSGYN+KKDV FLP+SGLVG+N+KTR++K+ C WW GPCLFEALD+
Sbjct: 225  RYDEIESKMIPFLRSSGYNVKKDVQFLPLSGLVGTNMKTRVDKNTCSWWNGPCLFEALDA 284

Query: 933  IEVPPRDPNGSVRMPIIDKFKDMGTVVMGKIESGTISEGDSLLVMPNKAHVKVVGIQCDE 754
            IEVP RDP G  RMPIIDKFKDMGTVVMGK+ESG+++EGDSLLVMPNK HVKVV + CDE
Sbjct: 285  IEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVTEGDSLLVMPNKTHVKVVAVYCDE 344

Query: 753  NRVSRAGPGENVRVKLSGIEEEDILSGFVLSSIIKPIAAVTEFDAQLQILELLDNAIFTA 574
            N+V RAGPGEN+RV+LSGI++EDIL+GFVLSS+ KPI AVTEF AQLQILELLDNAIFTA
Sbjct: 345  NKVRRAGPGENLRVRLSGIDDEDILAGFVLSSVAKPIVAVTEFVAQLQILELLDNAIFTA 404

Query: 573  GYNAVLHIHSAVEECEIVALLQQIDQXXXXXXXXXXXXXKNGAVVVCRV----------- 427
            GY AVLHIHS VEECEIV LLQQID              KNGAVVVCRV           
Sbjct: 405  GYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQANNMICIEKF 464

Query: 426  ----QLGRFTLRSEGKTIAVGKVTALPSLGGS 343
                QLGRFTLR+EGKT+AVGKVT LP+ G S
Sbjct: 465  SDFPQLGRFTLRTEGKTVAVGKVTELPTSGSS 496


>ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|222870975|gb|EEF08106.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  702 bits (1811), Expect = 0.0
 Identities = 348/428 (81%), Positives = 382/428 (89%), Gaps = 15/428 (3%)
 Frame = -3

Query: 1593 RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKEKSRESWYMAYIMDTNEE 1414
            RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAK+KSRESWYMAYIMDTNEE
Sbjct: 93   RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEE 152

Query: 1413 ERAKGKTVEVGRAHFETDSTRFTILDAPGHKNYVPNMISGASQADIGVLVISARKGEFET 1234
            ER KGKTVEVGRAHFET++TRFTILDAPGHK+YVPNMISGASQADIGVLVISARKGEFET
Sbjct: 153  ERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 212

Query: 1233 GYEKGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVGWSKERYSEIESKMIPFLKSSGYNL 1054
            GYE+GGQTREHVQLAKTLGVSKL+VVVNKMD+PTV WSKERY EIESKMIPFLKSSGYN+
Sbjct: 213  GYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVNWSKERYDEIESKMIPFLKSSGYNV 272

Query: 1053 KKDVLFLPISGLVGSNLKTRMEKSICPWWTGPCLFEALDSIEVPPRDPNGSVRMPIIDKF 874
            KKDV FLPISGL+G+N+KTR++K++CPWW GPCLFEALDSIEVPPRDPNG +RMPIIDKF
Sbjct: 273  KKDVQFLPISGLMGTNMKTRLDKAVCPWWNGPCLFEALDSIEVPPRDPNGPLRMPIIDKF 332

Query: 873  KDMGTVVMGKIESGTISEGDSLLVMPNKAHVKVVGIQCDENRVSRAGPGENVRVKLSGIE 694
            KDMGTVVMGK+ESG+++EGD+LLVMPNK  VKV+ + CDEN+V RAGPGENVRVKLSGI+
Sbjct: 333  KDMGTVVMGKVESGSVTEGDTLLVMPNKTQVKVLAVFCDENKVRRAGPGENVRVKLSGID 392

Query: 693  EEDILSGFVLSSIIKPIAAVTEFDAQLQILELLDNAIFTAGYNAVLHIHSAVEECEIVAL 514
            +EDILSGFVLSS+ +PI AVTEFDAQLQILELLDNAIFTAGY AVLH+HS VEECEIV L
Sbjct: 393  DEDILSGFVLSSVARPIFAVTEFDAQLQILELLDNAIFTAGYKAVLHVHSVVEECEIVQL 452

Query: 513  LQQIDQXXXXXXXXXXXXXKNGAVVVCRV---------------QLGRFTLRSEGKTIAV 379
            LQQID              KNGA+V+CR+               QLGRFTLR+EGKT+AV
Sbjct: 453  LQQIDPKTRKPMKKKVLFVKNGAIVLCRIQVNNLICVEKFSDFPQLGRFTLRTEGKTVAV 512

Query: 378  GKVTALPS 355
            GKVT LPS
Sbjct: 513  GKVTELPS 520


>ref|XP_002319868.1| predicted protein [Populus trichocarpa] gi|222858244|gb|EEE95791.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  684 bits (1765), Expect = 0.0
 Identities = 343/426 (80%), Positives = 374/426 (87%), Gaps = 15/426 (3%)
 Frame = -3

Query: 1593 RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKEKSRESWYMAYIMDTNEE 1414
            RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKEKSRESWYMAYIMDTNEE
Sbjct: 9    RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKEKSRESWYMAYIMDTNEE 68

Query: 1413 ERAKGKTVEVGRAHFETDSTRFTILDAPGHKNYVPNMISGASQADIGVLVISARKGEFET 1234
            ER KGKTVEVGRA+FET+++RFTILDAPGHK+YVPNMISGASQADIGVLVISARKGEFET
Sbjct: 69   ERVKGKTVEVGRAYFETETSRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 128

Query: 1233 GYEKGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVGWSKERYSEIESKMIPFLKSSGYNL 1054
            GYE+GGQTREHVQLAKTLGVSKL+VVVNKMDDPTV WSKERY EIESKM+PFLK SGYN+
Sbjct: 129  GYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKERYDEIESKMVPFLKLSGYNV 188

Query: 1053 KKDVLFLPISGLVGSNLKTRMEKSICPWWTGPCLFEALDSIEVPPRDPNGSVRMPIIDKF 874
            KKDV FLPISGL+G+N+KTRM K+ICPWW GPCLFEALD+IEVPPRDP G  RMPIIDKF
Sbjct: 189  KKDVQFLPISGLLGTNMKTRMGKAICPWWNGPCLFEALDAIEVPPRDPKGPFRMPIIDKF 248

Query: 873  KDMGTVVMGKIESGTISEGDSLLVMPNKAHVKVVGIQCDENRVSRAGPGENVRVKLSGIE 694
            KDMGTVVMGK+ESG+++EGDSLLVMPNK  VKV+ + CDEN+V  AGPGENVRV+LSGI+
Sbjct: 249  KDMGTVVMGKVESGSVTEGDSLLVMPNKTVVKVLAVYCDENKVRCAGPGENVRVRLSGID 308

Query: 693  EEDILSGFVLSSIIKPIAAVTEFDAQLQILELLDNAIFTAGYNAVLHIHSAVEECEIVAL 514
            +EDILSGFVLSS+ +PI AVTEFDAQLQILEL+DNAIFTAGY AVLHIH+ VEECEIV L
Sbjct: 309  DEDILSGFVLSSVARPITAVTEFDAQLQILELVDNAIFTAGYKAVLHIHAVVEECEIVQL 368

Query: 513  LQQIDQXXXXXXXXXXXXXKNGAVVVCRV---------------QLGRFTLRSEGKTIAV 379
            LQQID              KNGA+VVCRV               QLGRFTLR+EGKT+AV
Sbjct: 369  LQQIDPKTRKPMKKKVLFVKNGAIVVCRVQVNNLICIEKFSDFAQLGRFTLRTEGKTVAV 428

Query: 378  GKVTAL 361
            GKV  L
Sbjct: 429  GKVMEL 434


>ref|XP_003525203.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
            subunit ERF3A-like [Glycine max]
          Length = 504

 Score =  684 bits (1764), Expect = 0.0
 Identities = 362/505 (71%), Positives = 397/505 (78%), Gaps = 19/505 (3%)
 Frame = -3

Query: 1818 EIQSGIRSLELDSGEQSNGVGSMDXXXXXXXXXEQPDTMXXXXXXXXXXESIPVHXXXXX 1639
            +I+  IRSL+LDS E +NGV  ++         E+ D M          E   V      
Sbjct: 2    DIEEDIRSLQLDSAEDNNGV--VNAEDGRPEEVEKSDKMDEDPKQDVEAEPKAVEAEPKV 59

Query: 1638 XXXXXXXXXXXXXXK----RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEA 1471
                               RHLNVVFIGHVDAGKSTTGGQILFLSGQVD+RTIQKYEKEA
Sbjct: 60   KDKEVPSVQDEEDEPEMTKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEA 119

Query: 1470 KEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETDSTRFTILDAPGHKNYVPNMISGA 1291
            K+KSRESWYMAYIMDTNEEER KGKTVEVGRAHFET++TRFTILDAPGHK+YVPNMISGA
Sbjct: 120  KDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGA 179

Query: 1290 SQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVGWSKER 1111
            SQADIGVLVISARKGEFETGYE+GGQTREHVQLAKTLGVSKL+VVVNKMD+PTV WSKER
Sbjct: 180  SQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKER 239

Query: 1110 YSEIESKMIPFLKSSGYNLKKDVLFLPISGLVGSNLKTRMEKSICPWWTGPCLFEALDSI 931
            Y EIESKM+PFLK SGYN+KKDVLFLPISGL+G+N+KTR++KS+CPWW GPCLFEALD+I
Sbjct: 240  YDEIESKMVPFLKQSGYNVKKDVLFLPISGLMGANMKTRVDKSVCPWWNGPCLFEALDAI 299

Query: 930  EVPPRDPNGSVRMPIIDKFKDMGTVVMGKIESGTISEGDSLLVMPNKAHVKVVGIQCDEN 751
            EVP RDPNG  RMPIIDKFKDMGTVVMGK+ESG++ EGDSLLVMPNK  VKVV I  DE+
Sbjct: 300  EVPLRDPNGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLLVMPNKDPVKVVAIFIDED 359

Query: 750  RVSRAGPGENVRVKLSGIEEEDILSGFVLSSIIKPIAAVTEFDAQLQILELLDNAIFTAG 571
            RV RAGPGEN+R++LSG+EEEDILSGFVLSS+  PI AVTEF AQL ILELLDNAIFTAG
Sbjct: 360  RVKRAGPGENLRIRLSGVEEEDILSGFVLSSVANPIPAVTEFVAQLVILELLDNAIFTAG 419

Query: 570  YNAVLHIHSAVEECEIVALLQQIDQXXXXXXXXXXXXXKNGAVVVCRV------------ 427
            Y AVLHIHS VEECEIV LLQQID              KNGAVVVCRV            
Sbjct: 420  YKAVLHIHSVVEECEIVELLQQIDTKTKKPMKKKVLFVKNGAVVVCRVQVNNSICIEKFS 479

Query: 426  ---QLGRFTLRSEGKTIAVGKVTAL 361
               QLGRFTLR+EGKT+AVGKVT L
Sbjct: 480  DFPQLGRFTLRTEGKTVAVGKVTGL 504


>ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-binding subunit [Medicago
            truncatula] gi|355525084|gb|AET05538.1| Eukaryotic
            peptide chain release factor GTP-binding subunit
            [Medicago truncatula]
          Length = 497

 Score =  683 bits (1763), Expect = 0.0
 Identities = 363/502 (72%), Positives = 393/502 (78%), Gaps = 16/502 (3%)
 Frame = -3

Query: 1818 EIQSGIRSLELDSGEQSNGVGSMDXXXXXXXXXEQPDTMXXXXXXXXXXESIPVHXXXXX 1639
            +I+  IRSL+LDS E  NGV + +            D M          +++        
Sbjct: 2    DIEEDIRSLQLDSAEDINGVVNPEHEMPDV------DEMDEDPKEEVQAQAVEAGPKAKD 55

Query: 1638 XXXXXXXXXXXXXXK-RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKEK 1462
                          + RHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAK+K
Sbjct: 56   KEIPSVQDEEVEQTEKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDK 115

Query: 1461 SRESWYMAYIMDTNEEERAKGKTVEVGRAHFETDSTRFTILDAPGHKNYVPNMISGASQA 1282
            SRESWYMAYIMDTNEEER KGKTVEVGRAHFET++TRFTILDAPGHK+YVPNMISGASQA
Sbjct: 116  SRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQA 175

Query: 1281 DIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVGWSKERYSE 1102
            DIGVLVISARKGEFETGYE+GGQTREHVQLAKTLGV+KL+VVVNKMDDPTV WSKERY E
Sbjct: 176  DIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDE 235

Query: 1101 IESKMIPFLKSSGYNLKKDVLFLPISGLVGSNLKTRMEKSICPWWTGPCLFEALDSIEVP 922
            IESKMIPFLK SGYN+KKDVLFLPISGL+GSNLKTRM++SIC WW GPCLFEALDSIEVP
Sbjct: 236  IESKMIPFLKQSGYNVKKDVLFLPISGLMGSNLKTRMDRSICSWWDGPCLFEALDSIEVP 295

Query: 921  PRDPNGSVRMPIIDKFKDMGTVVMGKIESGTISEGDSLLVMPNKAHVKVVGIQCDENRVS 742
              DP    RMPIIDKFKDMGTVVMGK+ESGTI EGDSL +MPNK  VKVV I  DENRV 
Sbjct: 296  MGDPKRPFRMPIIDKFKDMGTVVMGKVESGTIREGDSLFIMPNKDQVKVVAIYIDENRVK 355

Query: 741  RAGPGENVRVKLSGIEEEDILSGFVLSSIIKPIAAVTEFDAQLQILELLDNAIFTAGYNA 562
            RAGPGEN+RV+LSG+EEEDIL+GFVLSS+  PI+AVTEF AQL ILELLDNAIFTAGY A
Sbjct: 356  RAGPGENLRVRLSGVEEEDILTGFVLSSVANPISAVTEFVAQLAILELLDNAIFTAGYKA 415

Query: 561  VLHIHSAVEECEIVALLQQIDQXXXXXXXXXXXXXKNGAVVVCRV--------------- 427
            VLHIHS VEECEIV LLQQID              KNGAVV+CRV               
Sbjct: 416  VLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVLCRVQVSNMICVEKFSDFP 475

Query: 426  QLGRFTLRSEGKTIAVGKVTAL 361
            QLGRFTLR+EGKTIAVGKVTAL
Sbjct: 476  QLGRFTLRTEGKTIAVGKVTAL 497