BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002005
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    73   2e-11
dbj|BAC65208.1| S locus F-box protein c [Prunus dulcis]                73   3e-11
gb|ACI32839.1| S locus F-box protein 1, partial [Prunus spinosa]...    73   3e-11
dbj|BAG12294.1| S locus F-box protein with the low allelic seque...    73   3e-11
dbj|BAF36716.1| S locus F-box protein with the low allelic seque...    73   3e-11

>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
 Frame = +3

Query: 3   ITQHLATLKDNNNNDDHQLIILDPFQCHDTPCYSLRFSLLSATGTNYKVPKVLDLPHHFD 182
           +  HL     N++ + ++L++L   +C+ T         L        + K L LPH   
Sbjct: 42  LLSHLNQSNTNHHRNRNRLLLLR--RCYSTATKKAERYSLHFDSDTLGIYKELKLPHV-- 97

Query: 183 NALESPKIIASCNGIICLQPDLSQNVSLWNPALKEF-RIXXXXXXXXXXXXXDDFYFGFG 359
           N  +S K++ S NG++CL   L QN+  WNP+++ F  +               +  GFG
Sbjct: 98  NWNQSFKLVGSSNGLLCL---LGQNIFFWNPSIQRFLALPWPSDIFTVYGSPYKYALGFG 154

Query: 360 YDAKTNDYKVVKVIFLN--------LMTCRVDLYSLSTDSWRPIDTVVP 482
           +D++ ND+K+V+++++          +  RV+LY LST SWR I    P
Sbjct: 155 FDSRANDFKLVRLVYIEGGPPVYDYELPPRVELYQLSTGSWRQITDSAP 203


>dbj|BAC65208.1| S locus F-box protein c [Prunus dulcis]
          Length = 409

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
 Frame = +3

Query: 189 LESPKIIASCNGIICLQPDLSQNVSLWNPALKEFRIXXXXXXXXXXXXXDDFYFGFGYDA 368
           +ESP I+  CNGI+CL P  S N+ L NPA+KE ++                  GFGYD 
Sbjct: 112 VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLPDWWGCA----VGFGYDP 166

Query: 369 KTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVF 497
           K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F
Sbjct: 167 KSKDYKVSRIASYQVEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYF 222


>gb|ACI32839.1| S locus F-box protein 1, partial [Prunus spinosa]
           gi|208972576|gb|ACI32845.1| S locus F-box protein 1,
           partial [Prunus spinosa] gi|208972578|gb|ACI32846.1| S
           locus F-box protein 1, partial [Prunus spinosa]
          Length = 245

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
 Frame = +3

Query: 189 LESPKIIASCNGIICLQPDLSQNVSLWNPALKEFRIXXXXXXXXXXXXXDDFYFGFGYDA 368
           +ESP I+  CNGI+CL P  S N+ L NPA+KE ++                  GFGYD 
Sbjct: 8   VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLPNWWGCA----VGFGYDP 62

Query: 369 KTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVF 497
           K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F
Sbjct: 63  KSKDYKVSRIATYQGEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYF 118


>dbj|BAG12294.1| S locus F-box protein with the low allelic sequence polymorphism
           1-S5 [Prunus avium]
          Length = 410

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
 Frame = +3

Query: 189 LESPKIIASCNGIICLQPDLSQNVSLWNPALKEFRIXXXXXXXXXXXXXDDFYFGFGYDA 368
           +ESP I+  CNGI+CL P  S N+ L NPA+KE ++                  GFGYD 
Sbjct: 112 VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLPDWWGCA----VGFGYDP 166

Query: 369 KTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVF 497
           K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F
Sbjct: 167 KSKDYKVSRIATYQAEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYF 222


>dbj|BAF36716.1| S locus F-box protein with the low allelic sequence polymorphism
           1-Sf [Prunus mume]
          Length = 410

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
 Frame = +3

Query: 189 LESPKIIASCNGIICLQPDLSQNVSLWNPALKEFRIXXXXXXXXXXXXXDDFYFGFGYDA 368
           +ESP I+  CNGI+CL P  S N+ L NPA+KE ++                  GFGYD 
Sbjct: 112 VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLPDWWGCA----VGFGYDP 166

Query: 369 KTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVF 497
           K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F
Sbjct: 167 KSKDYKVSRIASYQAEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYF 222