BLASTX nr result
ID: Coptis24_contig00001987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001987
(1909 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC19395.1| cystathionine gamma-synthase [Mesembryanthemum cr... 533 e-172
ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chl... 528 e-171
ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycope... 529 e-171
gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 ... 526 e-170
ref|NP_001237572.1| cystathionine-gamma-synthase precursor [Glyc... 526 e-169
>gb|AAC19395.1| cystathionine gamma-synthase [Mesembryanthemum crystallinum]
Length = 548
Score = 533 bits (1373), Expect(2) = e-172
Identities = 280/455 (61%), Positives = 326/455 (71%), Gaps = 25/455 (5%)
Frame = +2
Query: 92 ASCHARVLPTFECRSDPGN--------SKPEPNRXXXXXXXXXXXXVVGVNLYRFPPNFV 247
+SC ARVLP FECR +P + K P + RFPPNFV
Sbjct: 6 SSCCARVLPPFECRPEPADFSTAAAKQEKNIPKSFFGGANGRLFSSSSSSLILRFPPNFV 65
Query: 248 RQLSNKARRNCSNIGVAQVVAASWSNNDKNGS----------------VAAVDSVTTDVN 379
RQLS KARRNCSNIGVAQVVAASWSNN G+ +AAVD V D
Sbjct: 66 RQLSTKARRNCSNIGVAQVVAASWSNNSDAGATSCGGVPAATAVDAAAIAAVDHVEIDGG 125
Query: 380 EVVA-VGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFT 556
VV DGG + FL +DGS+A+HAGERLGRGI T
Sbjct: 126 AVVEDSNDGG--------VKELSSNNSNTLGLGDFRPPFLSSDGSVAIHAGERLGRGIVT 177
Query: 557 DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 736
D ITTPVVNT+AY+FK + +LIDFKEGR SFEYGRYGNPT+ LE KISALE AE+T+
Sbjct: 178 DAITTPVVNTSAYFFKKTADLIDFKEGRQTSFEYGRYGNPTSVVLEDKISALEGAESTIL 237
Query: 737 LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQ 916
LASGMCAS VLM ALV GGHIVTTTDCYRKTRIFI+ +L P M ++ TVIDP DV GL+
Sbjct: 238 LASGMCASIVLMLALVPAGGHIVTTTDCYRKTRIFIETFL-PKMGITATVIDPADVEGLK 296
Query: 917 YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGAD 1096
ALD+NNV+LFFTESPTNP+LRCVDI+LVS+LCH KG+LVC+DGTFATP+NQKAL+LGAD
Sbjct: 297 SALDENNVTLFFTESPTNPFLRCVDIKLVSELCHKKGALVCIDGTFATPLNQKALALGAD 356
Query: 1097 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1276
V++S TK+IGGHNDV+GGCISGS +I+ IR HHVLGG LNPNAAYL IRG+KTLHLR
Sbjct: 357 FVVHSMTKFIGGHNDVLGGCISGSKNLISTIRTFHHVLGGTLNPNAAYLMIRGMKTLHLR 416
Query: 1277 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1381
V+QQN+TAL MA++LEAHPK+ V+YPGLPSHP++
Sbjct: 417 VQQQNTTALRMAEILEAHPKVKHVYYPGLPSHPEH 451
Score = 100 bits (250), Expect(2) = e-172
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +3
Query: 1494 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1667
SFGGCESIVDQPAIMSYWDL+ R +GIKDNLVRFSFGVEDFEDLKAD+LQAL +
Sbjct: 491 SFGGCESIVDQPAIMSYWDLSPSDRLKYGIKDNLVRFSFGVEDFEDLKADVLQALEAI 548
>ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chloroplastic-like [Vitis
vinifera]
Length = 531
Score = 528 bits (1361), Expect(2) = e-171
Identities = 282/451 (62%), Positives = 328/451 (72%), Gaps = 18/451 (3%)
Frame = +2
Query: 83 MAVASCHARVLPTFECRSDP----GNSKPEP----NRXXXXXXXXXXXXVVGVN-----L 223
MAV+SC RV FECRS+P G +PE R + G + +
Sbjct: 1 MAVSSC-PRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLI 59
Query: 224 YRFPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNDK-----NGSVAAVDSVTTDVNEVV 388
+RFPPNFVRQLS KARRNCSNIGVAQVVAASWS + + S AA SV V V
Sbjct: 60 FRFPPNFVRQLSTKARRNCSNIGVAQVVAASWSADSAAAAAASASAAAAASVEASVEVSV 119
Query: 389 AVGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTDGIT 568
G D KASFL DG++ +HAGERLGRGI TD IT
Sbjct: 120 VESSGSDVQYEDLADE---------------KASFLGFDGTLTIHAGERLGRGIVTDAIT 164
Query: 569 TPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFLASG 748
TPVVNT+AY+FK + ELIDFKE R ASFEYGRYGNPTT LE KISALE AE+T+ +ASG
Sbjct: 165 TPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVIMASG 224
Query: 749 MCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQYALD 928
MCASTV++ ALV GGH+VTTTDCYR+TRIFI+ +L P + V VTVIDP D L+ ALD
Sbjct: 225 MCASTVMLLALVPPGGHMVTTTDCYRRTRIFIETFL-PKLGVEVTVIDPADTEALKSALD 283
Query: 929 QNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADIVLN 1108
+NNV+LFFTESPTNP+LRCVDIELVS+LCH KG+LVC+D TFATP+NQK LSLGAD+VL+
Sbjct: 284 KNNVTLFFTESPTNPFLRCVDIELVSELCHRKGALVCIDSTFATPLNQKTLSLGADLVLH 343
Query: 1109 SATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRVKQQ 1288
SATKYI GHNDVI GCISGS ++++ IR LHHVLGGVLNPNAAYL IRG+KTLHLRV+QQ
Sbjct: 344 SATKYIAGHNDVIAGCISGSEKLVSTIRNLHHVLGGVLNPNAAYLIIRGMKTLHLRVQQQ 403
Query: 1289 NSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1381
NSTAL MAK+LEAHPK+ V+YPGLPSHP++
Sbjct: 404 NSTALRMAKILEAHPKVKCVYYPGLPSHPEH 434
Score = 103 bits (257), Expect(2) = e-171
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 1494 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1667
SFGGCESIVDQPAIMSYWDL Q RA +GI+DNLVRFSFGVEDFEDLKADILQAL ++
Sbjct: 474 SFGGCESIVDQPAIMSYWDLNQSERAKYGIQDNLVRFSFGVEDFEDLKADILQALESI 531
>ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycopersicum]
gi|40806079|gb|AAR92031.1| cystathionine gamma synthase
[Solanum lycopersicum]
Length = 540
Score = 529 bits (1363), Expect(2) = e-171
Identities = 279/454 (61%), Positives = 329/454 (72%), Gaps = 21/454 (4%)
Frame = +2
Query: 83 MAVASCHARVLPTFECRSDP--GNSKPEPNRXXXXXXXXXXXX----VVGVN--LYRFPP 238
MAV+S +AR P+FECRS+P S P P V G++ +YRFPP
Sbjct: 1 MAVSS-YARAFPSFECRSEPDFSGSLPHPKAGVRFSGKYNSGSNRSQVYGLSSLIYRFPP 59
Query: 239 NFVRQLSNKARRNCSNIGVAQVVAASWSNN-------------DKNGSVAAVDSVTTDVN 379
NFVRQLS KARRNCSNIGVAQVVAASWSNN D + S A T +
Sbjct: 60 NFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITTGD 119
Query: 380 EVVAVGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTD 559
E VAV + DC ASFL +DGS+A+HAGERLGRGI TD
Sbjct: 120 EEVAVVENADCSDQNVQIKGSTGVKY---------ASFLNSDGSVAIHAGERLGRGIVTD 170
Query: 560 GITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFL 739
ITTPVVNT+AY+F + +LIDFKE R ASFEYGRYGNPTT LE KISALE AE+TL +
Sbjct: 171 AITTPVVNTSAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIV 230
Query: 740 ASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQY 919
ASGMCASTV+ ALV GGHIVTTTDCYRKTR+FI+ L P M ++ TVIDP D+ L+
Sbjct: 231 ASGMCASTVMFLALVPAGGHIVTTTDCYRKTRVFIETIL-PKMGITATVIDPADMGALEL 289
Query: 920 ALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADI 1099
AL+Q V LFFTESPTNP+LRCVDIELVSKLC KG+LVC+DGTFATP+NQKAL+LGAD+
Sbjct: 290 ALNQKKVDLFFTESPTNPFLRCVDIELVSKLCREKGALVCIDGTFATPLNQKALALGADL 349
Query: 1100 VLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRV 1279
V++SATK++GGHNDV+ GCISG ++++ IR LHH+LGG LNPNAAYL IRG+KTLHLRV
Sbjct: 350 VVHSATKFLGGHNDVLAGCISGPEKLVSVIRNLHHILGGALNPNAAYLIIRGMKTLHLRV 409
Query: 1280 KQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1381
+QQNSTAL MA++LEAHPK+ V+YPGLPSHP+Y
Sbjct: 410 QQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEY 443
Score = 101 bits (251), Expect(2) = e-171
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 1494 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1667
SFGGCESIVDQPAIMSYWDL+Q RA +GI DNLVRFSFGVEDFED+KAD+LQAL ++
Sbjct: 483 SFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI 540
>gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 [Solanum tuberosum]
Length = 539
Score = 526 bits (1354), Expect(2) = e-170
Identities = 277/454 (61%), Positives = 328/454 (72%), Gaps = 21/454 (4%)
Frame = +2
Query: 83 MAVASCHARVLPTFECRSDP--GNSKPEPNRXXXXXXXXXXXX----VVGVN--LYRFPP 238
MAV+S +AR P+FECRS+P S P P V G++ ++RFPP
Sbjct: 1 MAVSS-YARAFPSFECRSEPDFSGSLPHPKAGVRFSGKYNSGSNRSQVYGLSSLIFRFPP 59
Query: 239 NFVRQLSNKARRNCSNIGVAQVVAASWSNN-------------DKNGSVAAVDSVTTDVN 379
NFVRQLS KARRNCSNIGVAQVVAASWSNN D + S A T +
Sbjct: 60 NFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITAGD 119
Query: 380 EVVAVGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTD 559
E VAV + DC ASFL +DGS+A+HAGERLGRGI TD
Sbjct: 120 EEVAVVENADCNDQNVQITGTGVKY----------ASFLNSDGSVAIHAGERLGRGIVTD 169
Query: 560 GITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFL 739
ITTPVVNT+AY+F + +LIDFKE R ASFEYGRYGNPTT LE KISALE AE+TL +
Sbjct: 170 AITTPVVNTSAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIV 229
Query: 740 ASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQY 919
ASGMCASTV+ ALV GGHIVTTTDCYRKTR+FI+ L P M ++ TVIDP D+ L+
Sbjct: 230 ASGMCASTVMFLALVPAGGHIVTTTDCYRKTRVFIETIL-PKMGITATVIDPADMGALEL 288
Query: 920 ALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADI 1099
L+Q V LFFTESPTNP+LRCVDIELVSKLC KG+LVC+DGTFATP+NQKAL+LGAD+
Sbjct: 289 TLNQKKVDLFFTESPTNPFLRCVDIELVSKLCREKGALVCIDGTFATPLNQKALALGADL 348
Query: 1100 VLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRV 1279
V++SATK++GGHNDV+ GCISG ++++ IR LHH+LGG LNPNAAYL IRG+KTLHLRV
Sbjct: 349 VVHSATKFLGGHNDVLAGCISGPEKLVSVIRNLHHILGGALNPNAAYLIIRGMKTLHLRV 408
Query: 1280 KQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1381
+QQNSTAL MA++LEAHPK+ V+YPGLPSHP+Y
Sbjct: 409 QQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEY 442
Score = 101 bits (251), Expect(2) = e-170
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 1494 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1667
SFGGCESIVDQPAIMSYWDL+Q RA +GI DNLVRFSFGVEDFED+KAD+LQAL ++
Sbjct: 482 SFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI 539
>ref|NP_001237572.1| cystathionine-gamma-synthase precursor [Glycine max]
gi|4959932|gb|AAD34548.1|AF141602_1
cystathionine-gamma-synthase precursor [Glycine max]
Length = 536
Score = 526 bits (1356), Expect(2) = e-169
Identities = 274/449 (61%), Positives = 329/449 (73%), Gaps = 16/449 (3%)
Frame = +2
Query: 83 MAVASCHARVLPTFECRSDPGNSKPEPN-----RXXXXXXXXXXXXVVGVN--LYRFPPN 241
MAV+S H R TFECRSDP S P P+ R G++ + RFPPN
Sbjct: 1 MAVSSSHMRF--TFECRSDPDFSPPPPSFDNLRRRNFRSSADSGAAFHGISSLILRFPPN 58
Query: 242 FVRQLSNKARRNCSNIGVAQVVAASWSNNDKNGSVA---------AVDSVTTDVNEVVAV 394
F RQLS KARRNCSNIGVAQ+VAASWSNN N A A D+ T + VVA
Sbjct: 59 FQRQLSTKARRNCSNIGVAQIVAASWSNNSDNSPAAGAPAPPAATATDAATVPLPVVVAA 118
Query: 395 GDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTDGITTP 574
+ +SFL +D S +HA ERLGRGI TDGITTP
Sbjct: 119 NED-------VVVSAAADENGAVQLNSSSYSSFLKSDASKTIHAAERLGRGIETDGITTP 171
Query: 575 VVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFLASGMC 754
VVNT+AY+FK + +LIDFKE R S+EYGRYGNPTT LE KISALE AE+T+ +ASGMC
Sbjct: 172 VVNTSAYFFKKTADLIDFKENRQVSYEYGRYGNPTTVVLEEKISALEGAESTVIMASGMC 231
Query: 755 ASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQYALDQN 934
AS VL ALV GGH+VTTTDCYRKTRIFI+ +L P M ++ TVIDP DV L+ AL+Q+
Sbjct: 232 ASVVLFMALVPAGGHLVTTTDCYRKTRIFIETFL-PKMGITTTVIDPADVGALESALEQH 290
Query: 935 NVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADIVLNSA 1114
NVSLFFTESPTNP+LRCVDI+LVS+LCH KG+L+C+DGTFATP+NQKAL+LGAD++L+S
Sbjct: 291 NVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSL 350
Query: 1115 TKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRVKQQNS 1294
TKY+GGH+DV+GGCISGS++V+++IR LHHVLGG LNPNAAYLFIRG+KTLHLRV+QQNS
Sbjct: 351 TKYMGGHHDVLGGCISGSIKVVSQIRTLHHVLGGTLNPNAAYLFIRGMKTLHLRVQQQNS 410
Query: 1295 TALEMAKVLEAHPKIARVHYPGLPSHPDY 1381
T + MAK+LEAHPK+ RV+YPGLPSHP++
Sbjct: 411 TGMRMAKLLEAHPKVKRVYYPGLPSHPEH 439
Score = 97.1 bits (240), Expect(2) = e-169
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +3
Query: 1494 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1667
SFGGCESIVDQPAI+SYWDL Q RA + I DNLVRFSFGVEDFEDLKAD+LQAL +
Sbjct: 479 SFGGCESIVDQPAILSYWDLPQSERAKYKIYDNLVRFSFGVEDFEDLKADVLQALEAI 536