BLASTX nr result

ID: Coptis24_contig00001986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001986
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136693.1| PREDICTED: uncharacterized protein At5g39570...    74   5e-24
ref|XP_004159652.1| PREDICTED: uncharacterized protein At5g39570...    74   5e-24
ref|XP_002332006.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-22
ref|XP_002332567.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-22
ref|XP_003543859.1| PREDICTED: uncharacterized protein At5g39570...    64   4e-21

>ref|XP_004136693.1| PREDICTED: uncharacterized protein At5g39570-like [Cucumis sativus]
          Length = 323

 Score = 74.3 bits (181), Expect(2) = 5e-24
 Identities = 43/85 (50%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
 Frame = +2

Query: 239 DYERPHFQSNAEPSAYGDEALQTEYSSYSRP-----NKPSG--GGGRPKPQVNYGFQPQX 397
           DYERP F+S AEPSAYGD+ALQ EYSSYSRP       PSG  G G  +PQ  YGFQP  
Sbjct: 55  DYERPQFESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSSRPQPAYGFQPS- 113

Query: 398 XXXXXXXXXXXXXXXXXKKPSYGEE 472
                            +KP YGE+
Sbjct: 114 -------GSEYGSEGYRRKPEYGEQ 131



 Score = 61.6 bits (148), Expect(2) = 5e-24
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = +1

Query: 16  YYSRXXXXXXXXXXXXPTPYGGGYDIALTYGRPVEPSEETCYP 144
           YYSR            PTPYGGG+D+ LTYGRP+ PSEETCYP
Sbjct: 3   YYSRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYP 45


>ref|XP_004159652.1| PREDICTED: uncharacterized protein At5g39570-like, partial [Cucumis
           sativus]
          Length = 172

 Score = 74.3 bits (181), Expect(2) = 5e-24
 Identities = 43/85 (50%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
 Frame = +2

Query: 239 DYERPHFQSNAEPSAYGDEALQTEYSSYSRP-----NKPSG--GGGRPKPQVNYGFQPQX 397
           DYERP F+S AEPSAYGD+ALQ EYSSYSRP       PSG  G G  +PQ  YGFQP  
Sbjct: 55  DYERPQFESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSSRPQPAYGFQPS- 113

Query: 398 XXXXXXXXXXXXXXXXXKKPSYGEE 472
                            +KP YGE+
Sbjct: 114 -------GSEYGSEGYRRKPEYGEQ 131



 Score = 61.6 bits (148), Expect(2) = 5e-24
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = +1

Query: 16  YYSRXXXXXXXXXXXXPTPYGGGYDIALTYGRPVEPSEETCYP 144
           YYSR            PTPYGGG+D+ LTYGRP+ PSEETCYP
Sbjct: 3   YYSRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYP 45


>ref|XP_002332006.1| predicted protein [Populus trichocarpa] gi|222832515|gb|EEE70992.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 67.8 bits (164), Expect(2) = 2e-22
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +2

Query: 239 DYERPHFQSNAEPSAYGDEALQTEYSSYSRPNKPSGGGGRPKPQVNYGFQP 391
           DY+RP++ S +EPSAY DEAL+TEYSSY+RP KP  G    +PQ  YGFQP
Sbjct: 55  DYDRPNYSSYSEPSAYADEALETEYSSYARP-KPRPGSTYGEPQPAYGFQP 104



 Score = 62.8 bits (151), Expect(2) = 2e-22
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 64  PTPYGGGYDIALTYGRPVEPSEETCYPI 147
           PTPYGGGYDIALTYGRP+ PS+ETCYPI
Sbjct: 20  PTPYGGGYDIALTYGRPIPPSDETCYPI 47


>ref|XP_002332567.1| predicted protein [Populus trichocarpa] gi|222832729|gb|EEE71206.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 67.8 bits (164), Expect(2) = 2e-22
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +2

Query: 239 DYERPHFQSNAEPSAYGDEALQTEYSSYSRPNKPSGGGGRPKPQVNYGFQP 391
           DY+RP++ S +EPSAY DEAL+TEYSSY+RP KP  G    +PQ  YGFQP
Sbjct: 53  DYDRPNYSSYSEPSAYADEALETEYSSYARP-KPRPGSTYGEPQPAYGFQP 102



 Score = 62.8 bits (151), Expect(2) = 2e-22
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 64  PTPYGGGYDIALTYGRPVEPSEETCYPI 147
           PTPYGGGYDIALTYGRP+ PS+ETCYPI
Sbjct: 20  PTPYGGGYDIALTYGRPIPPSDETCYPI 47


>ref|XP_003543859.1| PREDICTED: uncharacterized protein At5g39570-like [Glycine max]
          Length = 374

 Score = 64.3 bits (155), Expect(2) = 4e-21
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = +2

Query: 239 DYERPHFQSNAEPSAYGDEALQTEYSSYSRPN-KPSGGGGRPKPQVNYG 382
           DY+RP + SNAEPSAYGDEAL TEYSSYSRP  +P+  G  P     YG
Sbjct: 59  DYDRPQYTSNAEPSAYGDEALATEYSSYSRPKPRPAPAGFNPAAGSGYG 107



 Score = 62.0 bits (149), Expect(2) = 4e-21
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = +1

Query: 64  PTPYGGGYDIALTYGRPVEPSEETCYPI 147
           PTPYGGGYDIALTYGRP+ PS+ETCYP+
Sbjct: 22  PTPYGGGYDIALTYGRPIPPSDETCYPL 49


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