BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001957
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   300   6e-79
ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vi...   295   3e-77
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...   286   1e-74
ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|2...   285   2e-74
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...   285   3e-74

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  300 bits (768), Expect = 6e-79
 Identities = 167/327 (51%), Positives = 213/327 (65%), Gaps = 17/327 (5%)
 Frame = -2

Query: 1285 TTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPSTDDPR 1106
            +T+I+S+H DII TH+LTRLDGPTLA+   ASSQLH L+  + LW +IC STWPS +DP 
Sbjct: 5    STTITSVHPDIIQTHILTRLDGPTLAAAGAASSQLHALATVDKLWRDICTSTWPSLNDPT 64

Query: 1105 IRQFISNFPNGPRSFFSKSFPLLISHP----DPPSQNLNP--PSQTQELISAVDIHYQGK 944
            ++  +S FP G RSFFS S+PLL +HP       S+ + P   S T ELISAVDIHY+  
Sbjct: 65   LQALVSAFPGGHRSFFSDSYPLL-AHPLDQYHGQSRKIPPTTSSPTLELISAVDIHYKNS 123

Query: 943  SIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIVQKRD----TRRDLFEELRLSWII 776
             IFSKV+  ET +GWF+CSPFR+DLLDPKD VPT +    D        L + L LSWI+
Sbjct: 124  LIFSKVEATETITGWFQCSPFRVDLLDPKDTVPTPVQYSVDGDYKWLSHLEDTLTLSWIL 183

Query: 775  INPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD---VQCGIIVTF----G 617
            I+P  K+AAN SS RPVSV+RHWLT EVQVR+AT++G D+      VQCGI+VT     G
Sbjct: 184  IDPTRKRAANLSSLRPVSVKRHWLTGEVQVRYATVVGGDRTVGSEVVQCGIVVTCAGKEG 243

Query: 616  GEMQVREVSLQVENMDGINLNGKDSLGILEKAIXXXXXXXXXXXXXXXXXXXYVTXXXXX 437
            GEMQVREV+LQVE+M+G +LNGK+SL IL++A+                   Y+      
Sbjct: 244  GEMQVREVNLQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARYERYLEMMGER 303

Query: 436  XXXXXXXXXRLDALCVAIGVSILASFW 356
                      LD +C+A+GV+I  SFW
Sbjct: 304  RERRLRREKTLDMVCIALGVTIFLSFW 330


>ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vinifera]
          Length = 342

 Score =  295 bits (754), Expect = 3e-77
 Identities = 158/275 (57%), Positives = 196/275 (71%), Gaps = 8/275 (2%)
 Frame = -2

Query: 1318 TTTITMDEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNIC 1139
            TTT  +  G+A     +LH DI+ TH+LTRLDGPTLAS SCA ++LH LS   +LW  IC
Sbjct: 11   TTTTVVQSGIA-----ALHPDILETHILTRLDGPTLASASCADTKLHALSTQPDLWITIC 65

Query: 1138 LSTWPSTDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQTQELISAVDI 959
             STWPST  PR+   +S+FP+GPRSFFS S+P+L       S N +P +    LISAVDI
Sbjct: 66   TSTWPSTSTPRLLHLMSSFPDGPRSFFSSSYPIL-HRCTNSSTNSDPSAPPVRLISAVDI 124

Query: 958  HYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIVQ--KRDTRRDLFEELRLS 785
            +Y  K I SKVQE ET + WFRCSPFRID+LDPKDVVPTSI      DT R L E + LS
Sbjct: 125  YYNEKPIISKVQETETATEWFRCSPFRIDVLDPKDVVPTSIQHPGDDDTSRKLGENISLS 184

Query: 784  WIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD--VQCGIIVTFG-- 617
            WI+++  G++AAN SS + VSV+RHWL+ EVQ+RFA+ILG D+ T   VQCGI+VT    
Sbjct: 185  WIVMDTTGRRAANLSSHKAVSVERHWLSGEVQLRFASILGGDKGTTELVQCGIVVTCDGS 244

Query: 616  --GEMQVREVSLQVENMDGINLNGKDSLGILEKAI 518
              GEMQV EVSLQ+E+MDG++L GK+SL IL KA+
Sbjct: 245  KTGEMQVTEVSLQLEDMDGVHLMGKESLVILHKAL 279


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  286 bits (732), Expect = 1e-74
 Identities = 152/278 (54%), Positives = 195/278 (70%), Gaps = 17/278 (6%)
 Frame = -2

Query: 1300 DEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPS 1121
            D   A+TSIS +H DI+ TH+LTRLDGP LAS +C SS+LH L+ +  LW+ IC STWPS
Sbjct: 15   DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 1120 TDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQ-------TQELISAVD 962
            T  PR+   IS FP+GPRSFFS S P   +H +  + +   P+          ELISAVD
Sbjct: 75   TTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVD 134

Query: 961  IHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI---VQKRDTRRDLFEELR 791
            I+Y+G+ IFSKV E ET SGWFRCSPFRID+LDPKDVVPT I   + + +  R+L E+L 
Sbjct: 135  IYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLT 194

Query: 790  LSWIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD---VQCGIIVTF 620
            LSWI+I+  G++A N SS+R V V++HWL+ EV V F T+LG ++ T    V+CGI VT 
Sbjct: 195  LSWIVIDGAGRRAMNLSSYRAVKVEQHWLSGEVHVEFGTVLGGEKGTAAEWVKCGIAVTC 254

Query: 619  ----GGEMQVREVSLQVENMDGINLNGKDSLGILEKAI 518
                GG +QVREV+LQVE+MDG  L+GKDSL ILE+A+
Sbjct: 255  GGWEGGNLQVREVNLQVEDMDGTFLDGKDSLVILERAM 292


>ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|222837892|gb|EEE76257.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  285 bits (730), Expect = 2e-74
 Identities = 152/278 (54%), Positives = 194/278 (69%), Gaps = 11/278 (3%)
 Frame = -2

Query: 1330 CYGDTTTITMDEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLW 1151
            C  +T T T++  +AT SIS++H DI+  H+L RLDG +L ST+C S++L++L++ ++LW
Sbjct: 9    CSSNTATTTVEPSIAT-SISTIHPDILQAHILNRLDGLSLVSTACTSTELNSLASQQDLW 67

Query: 1150 TNICLSTWPSTDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQTQELIS 971
            TNIC S WPST+ PRIR+ IS  P+G RS FS+SFPL       P ++ + PS   ELIS
Sbjct: 68   TNICHSIWPSTNTPRIREIISRLPSGWRSLFSESFPLTTGPRVNPPRDHDHPS---ELIS 124

Query: 970  AVDIHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIVQ--KRDTRRDLFEE 797
            AVDIHY+ K IFSKV E ET S WF CSPFRID+LDPKD  PT I      +T RDL  +
Sbjct: 125  AVDIHYKNKLIFSKVVETETSSSWFLCSPFRIDMLDPKDTCPTPIPNSGSEETCRDLAGD 184

Query: 796  LRLSWIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQ----VTDVQCGII 629
            L LSWI+++P   ++ N SS +PVSVQRHWL+ EV  RFAT+L   +       VQCGI+
Sbjct: 185  LSLSWILLDPTRLRSVNLSSHKPVSVQRHWLSGEVHARFATVLAAGERGSASESVQCGIV 244

Query: 628  VTF-----GGEMQVREVSLQVENMDGINLNGKDSLGIL 530
            VT      GGEMQVR VSLQVE+MDG+ LNGK SLG+L
Sbjct: 245  VTCGGGAQGGEMQVRGVSLQVEDMDGVFLNGKGSLGVL 282


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  285 bits (728), Expect = 3e-74
 Identities = 151/278 (54%), Positives = 195/278 (70%), Gaps = 17/278 (6%)
 Frame = -2

Query: 1300 DEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPS 1121
            D   A+TSIS +H DI+ TH+LTRLDGP LAS +C SS+LH L+ +  LW+ IC STWPS
Sbjct: 15   DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 1120 TDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQ-------TQELISAVD 962
            T  PR+   IS FP+GPRSFFS S P   +H +  + +   P+          ELISAVD
Sbjct: 75   TTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVD 134

Query: 961  IHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI---VQKRDTRRDLFEELR 791
            I+Y+G+ IFSKV E ET SGWFRCSPFRID+LDPKDVVPT I   + + +  R+L E+L 
Sbjct: 135  IYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLT 194

Query: 790  LSWIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD---VQCGIIVTF 620
            LSWI+I+  G++A N SS+R V V++HWL+ EV V F T+LG ++ T    V+CGI VT 
Sbjct: 195  LSWIVIDGAGRRAMNLSSYRAVKVEQHWLSGEVHVEFGTVLGGEKGTAAEWVKCGIAVTC 254

Query: 619  ----GGEMQVREVSLQVENMDGINLNGKDSLGILEKAI 518
                GG +QVREV+LQVE+MDG  L+GK+SL ILE+A+
Sbjct: 255  GGWEGGNLQVREVNLQVEDMDGTFLDGKESLVILERAM 292