BLASTX nr result
ID: Coptis24_contig00001942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001942
(1113 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259... 468 e-130
ref|XP_002513943.1| conserved hypothetical protein [Ricinus comm... 451 e-124
ref|XP_003544803.1| PREDICTED: uncharacterized protein LOC100791... 440 e-121
ref|XP_002301062.1| predicted protein [Populus trichocarpa] gi|2... 439 e-121
gb|ABK93831.1| unknown [Populus trichocarpa] gi|118487520|gb|ABK... 439 e-121
>ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259041 [Vitis vinifera]
gi|147765766|emb|CAN68978.1| hypothetical protein
VITISV_040774 [Vitis vinifera]
Length = 319
Score = 468 bits (1205), Expect = e-130
Identities = 229/304 (75%), Positives = 256/304 (84%), Gaps = 2/304 (0%)
Frame = -2
Query: 1013 VVSLFHVSSAGRKLDEFVQDPSSLLKYHKGPLLSGKITINLIWYGKFKPSQRAIISDFVQ 834
V+SLFHVS A RKL+E VQ LL+YH GPLLSGKI+INLIWYGKFKPSQRAI+SDF+
Sbjct: 16 VISLFHVSYAARKLNELVQQQPLLLEYHNGPLLSGKISINLIWYGKFKPSQRAIVSDFIT 75
Query: 833 SLYPSK-SQTTPSVSSWWKTTEKYYPLTSKKPTSLHLTMGRQILDENYSLGKTLNNRKIV 657
SL S SQ PSV++WWKTTEKYY LTSK P+SL L++G QILDE YSLGK+L ++IV
Sbjct: 76 SLSSSSLSQDQPSVATWWKTTEKYYHLTSKNPSSLKLSLGEQILDETYSLGKSLTGKQIV 135
Query: 656 RLAGRGDQKNAINVVLTASDVLVDGFCSSRCGTHGSSST-KNAHIKNKIYKFAYIWVGNS 480
+LA +G+Q NAINVVLT+SDV V+GFCSSRCGTHGSSS+ KN +K K YKFAY+WVGNS
Sbjct: 136 QLASKGEQMNAINVVLTSSDVAVEGFCSSRCGTHGSSSSSKNVQVKGKNYKFAYVWVGNS 195
Query: 479 EVQCPGQCAWPFHQPIYGPQGAPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGS 300
E QCPGQCAWPFHQPIYGPQ PLVAPNNDVGLDG+VINLASLLAGTATNPFGNGY+QG
Sbjct: 196 ETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGIVINLASLLAGTATNPFGNGYFQGP 255
Query: 299 ADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXGRKYLLPALFDPSTSSC 120
A+APLEAASACPG+YGK AYPGYAGDLLVD GRKYLLPAL+DPSTSSC
Sbjct: 256 AEAPLEAASACPGVYGKGAYPGYAGDLLVDSVTGASYNAHGANGRKYLLPALYDPSTSSC 315
Query: 119 STLV 108
STLV
Sbjct: 316 STLV 319
>ref|XP_002513943.1| conserved hypothetical protein [Ricinus communis]
gi|223547029|gb|EEF48526.1| conserved hypothetical
protein [Ricinus communis]
Length = 317
Score = 451 bits (1159), Expect = e-124
Identities = 221/304 (72%), Positives = 251/304 (82%), Gaps = 2/304 (0%)
Frame = -2
Query: 1013 VVSLFHVSSAGRKLDEFVQDPSSLLKYHKGPLLSGKITINLIWYGKFKPSQRAIISDFVQ 834
++S+F +S A RKL+E VQD LL+YH GPLLSGKI+INLIWYGKF+PSQ+AIISDF+
Sbjct: 15 LISIFQISLAARKLNELVQDQPQLLRYHNGPLLSGKISINLIWYGKFQPSQKAIISDFIS 74
Query: 833 SLYPSKSQTT-PSVSSWWKTTEKYYPLTSKKPTSLHLTMGRQILDENYSLGKTLNNRKIV 657
SL +SQ + PSV+SWWKTTEKYY L SKK T L LT+G+QI+DE YSLGK+L N IV
Sbjct: 75 SLSEHQSQNSQPSVASWWKTTEKYYHLNSKKAT-LSLTLGKQIVDEAYSLGKSLTNEHIV 133
Query: 656 RLAGRGDQKNAINVVLTASDVLVDGFCSSRCGTHGSSS-TKNAHIKNKIYKFAYIWVGNS 480
LA +GD+ NAINVVLT++DV VDGFC +RCGTHGS+S +K HIK K YKFAYIWVGNS
Sbjct: 134 ELASKGDKMNAINVVLTSADVAVDGFCLNRCGTHGSASGSKTGHIKGKNYKFAYIWVGNS 193
Query: 479 EVQCPGQCAWPFHQPIYGPQGAPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGS 300
E+QCPG CAWPFHQPIYGPQ PLVAPNNDVGLDGMVINLA LLAGTATNPFGNGY+QG
Sbjct: 194 EIQCPGYCAWPFHQPIYGPQNQPLVAPNNDVGLDGMVINLAGLLAGTATNPFGNGYFQGP 253
Query: 299 ADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXGRKYLLPALFDPSTSSC 120
+APLEAASACPG+YGK AYPGYAG+LLVD GRKYLLPAL+DPSTSSC
Sbjct: 254 KEAPLEAASACPGVYGKGAYPGYAGNLLVDSTTGASYNAYGDNGRKYLLPALYDPSTSSC 313
Query: 119 STLV 108
STLV
Sbjct: 314 STLV 317
>ref|XP_003544803.1| PREDICTED: uncharacterized protein LOC100791695 [Glycine max]
Length = 313
Score = 440 bits (1131), Expect = e-121
Identities = 212/305 (69%), Positives = 250/305 (81%), Gaps = 3/305 (0%)
Frame = -2
Query: 1013 VVSLFHVSSAGRKLDEFVQDPSSLLKYHKGPLLSGKITINLIWYGKFKPSQRAIISDFVQ 834
++S+F +S A R+L+E VQD + LL+YH GPLLSGKI+INLIWYG FKPSQ+AI+SDF+
Sbjct: 11 LISIFQISFATRRLNELVQDQTQLLRYHNGPLLSGKISINLIWYGHFKPSQKAIVSDFIT 70
Query: 833 SLYPSKSQTT-PSVSSWWKTTEKYYPLTS--KKPTSLHLTMGRQILDENYSLGKTLNNRK 663
SL PS +T PSV++WWKTTEKYY S KK + L + + +QILDENYSLGK+L ++
Sbjct: 71 SLSPSSPHSTQPSVATWWKTTEKYYHHLSNTKKTSPLSIPLNKQILDENYSLGKSLTSKH 130
Query: 662 IVRLAGRGDQKNAINVVLTASDVLVDGFCSSRCGTHGSSSTKNAHIKNKIYKFAYIWVGN 483
+++LA +GD KNAINVVLT++DV V+GFC+SRCGTHGSSS H KNK YKFAYIWVGN
Sbjct: 131 LIQLASKGDHKNAINVVLTSADVAVEGFCTSRCGTHGSSSA--GHAKNKNYKFAYIWVGN 188
Query: 482 SEVQCPGQCAWPFHQPIYGPQGAPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQG 303
SE QCPGQCAWPFHQPIYGPQ PLVAPNNDVG+DGMVINLASLLAGT TNPFGNG+YQG
Sbjct: 189 SEAQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGIDGMVINLASLLAGTVTNPFGNGFYQG 248
Query: 302 SADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXGRKYLLPALFDPSTSS 123
A+APLEAA+ACPG+YGK AYPGYAG+L VD GRKYLLPAL+DP+TSS
Sbjct: 249 PAEAPLEAATACPGVYGKGAYPGYAGNLNVDSSTGASYNAHGANGRKYLLPALYDPATSS 308
Query: 122 CSTLV 108
CSTLV
Sbjct: 309 CSTLV 313
>ref|XP_002301062.1| predicted protein [Populus trichocarpa] gi|222842788|gb|EEE80335.1|
predicted protein [Populus trichocarpa]
Length = 319
Score = 439 bits (1130), Expect = e-121
Identities = 218/306 (71%), Positives = 248/306 (81%), Gaps = 4/306 (1%)
Frame = -2
Query: 1013 VVSLFHVSSAGRKLDEFVQDPSSLLKYHKGPLLSGKITINLIWYGKFKPSQRAIISDFVQ 834
+V LFHVS A RKL+E VQD LL+YH G LL GKI++NLIWYGKFKPSQRAIISDFV
Sbjct: 15 LVCLFHVSFAARKLNELVQDQPQLLRYHDGALLYGKISVNLIWYGKFKPSQRAIISDFVT 74
Query: 833 SLYPSKSQ---TTPSVSSWWKTTEKYYPLTSKKPTSLHLTMGRQILDENYSLGKTLNNRK 663
SL S S + PSV+ WW+TTEKYY LTSKK T L LT+G QILD YSLGK+L +++
Sbjct: 75 SLSVSPSSLKDSQPSVAKWWETTEKYYHLTSKKNT-LSLTLGTQILDAKYSLGKSLTDKQ 133
Query: 662 IVRLAGRGDQKNAINVVLTASDVLVDGFCSSRCGTHGSS-STKNAHIKNKIYKFAYIWVG 486
IV LA +GDQK+A+N+VLT+SDV V+GFC +RCGTHGS+ +K+ +IK K Y+FAYIWVG
Sbjct: 134 IVELASKGDQKDAVNIVLTSSDVTVEGFCLNRCGTHGSALGSKSGNIKGKNYRFAYIWVG 193
Query: 485 NSEVQCPGQCAWPFHQPIYGPQGAPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQ 306
NSE QCPG CAWPFHQPIYGPQ PLVAPNNDVGLDGMVINLASL+AGTATNPFGNGYYQ
Sbjct: 194 NSETQCPGYCAWPFHQPIYGPQNPPLVAPNNDVGLDGMVINLASLMAGTATNPFGNGYYQ 253
Query: 305 GSADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXGRKYLLPALFDPSTS 126
G +APLEAASACPG+YGK AYPGYAG LLVD GRKYLLPAL+DPSTS
Sbjct: 254 GPKEAPLEAASACPGVYGKGAYPGYAGSLLVDSTTGASYNAHGSNGRKYLLPALYDPSTS 313
Query: 125 SCSTLV 108
+CSTLV
Sbjct: 314 TCSTLV 319
>gb|ABK93831.1| unknown [Populus trichocarpa] gi|118487520|gb|ABK95587.1| unknown
[Populus trichocarpa]
Length = 319
Score = 439 bits (1130), Expect = e-121
Identities = 218/306 (71%), Positives = 248/306 (81%), Gaps = 4/306 (1%)
Frame = -2
Query: 1013 VVSLFHVSSAGRKLDEFVQDPSSLLKYHKGPLLSGKITINLIWYGKFKPSQRAIISDFVQ 834
+V LFHVS A RKL+E VQD LL+YH G LL GKI++NLIWYGKFKPSQRAIISDFV
Sbjct: 15 LVCLFHVSFAARKLNELVQDQPQLLRYHDGALLYGKISVNLIWYGKFKPSQRAIISDFVT 74
Query: 833 SLYPSKSQ---TTPSVSSWWKTTEKYYPLTSKKPTSLHLTMGRQILDENYSLGKTLNNRK 663
SL S S + PSV+ WW+TTEKYY LTSKK T L LT+G QILD YSLGK+L +++
Sbjct: 75 SLSVSPSSLKDSQPSVAKWWETTEKYYHLTSKKNT-LSLTLGTQILDAKYSLGKSLTDKQ 133
Query: 662 IVRLAGRGDQKNAINVVLTASDVLVDGFCSSRCGTHGSS-STKNAHIKNKIYKFAYIWVG 486
IV LA +GDQK+A+N+VLT+SDV V+GFC +RCGTHGS+ +K+ +IK K Y+FAYIWVG
Sbjct: 134 IVELASKGDQKDAVNIVLTSSDVTVEGFCLNRCGTHGSALGSKSGNIKGKNYRFAYIWVG 193
Query: 485 NSEVQCPGQCAWPFHQPIYGPQGAPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQ 306
NSE QCPG CAWPFHQPIYGPQ PLVAPNNDVGLDGMVINLASL+AGTATNPFGNGYYQ
Sbjct: 194 NSETQCPGYCAWPFHQPIYGPQNPPLVAPNNDVGLDGMVINLASLMAGTATNPFGNGYYQ 253
Query: 305 GSADAPLEAASACPGIYGKNAYPGYAGDLLVDXXXXXXXXXXXXXGRKYLLPALFDPSTS 126
G +APLEAASACPG+YGK AYPGYAG LLVD GRKYLLPAL+DPSTS
Sbjct: 254 GPKEAPLEAASACPGVYGKGAYPGYAGSLLVDSTTGASYNAHGSNGRKYLLPALYDPSTS 313
Query: 125 SCSTLV 108
+CSTLV
Sbjct: 314 TCSTLV 319