BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001938
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloro...   191   1e-46
gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]          182   6e-44
ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloro...   177   3e-42
gb|AEO36436.1| hypothetical protein [Amblyomma maculatum]             175   1e-41
ref|XP_002532831.1| 50S ribosomal protein L29, chloroplast precu...   174   2e-41

>ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Vitis
           vinifera]
          Length = 161

 Score =  191 bits (486), Expect = 1e-46
 Identities = 107/149 (71%), Positives = 119/149 (79%), Gaps = 2/149 (1%)
 Frame = +3

Query: 33  LSLTVPTATTFASKSLSIITPKSSSFSGIRICIPNLRT--QXXXXXXVVMMAKREEELKG 206
           LS+  P++     K+ S   PKSS F+GIRI  PN  +         VVMMAKREEELK 
Sbjct: 4   LSIASPSSLKIPPKTTSTF-PKSS-FNGIRIPTPNKPSFRSPSSSSSVVMMAKREEELKE 61

Query: 207 IRAKTTEEINEEIIDLKGELLMLRLQKSAREEFKNSEFGRMRKRVARMLTVRRERELEEG 386
           IRAKTTEE+NEEI+DLKGELLMLRLQKS R EFK SEFGRMRKRVARMLTV+RERE+EEG
Sbjct: 62  IRAKTTEELNEEIVDLKGELLMLRLQKSVRNEFKPSEFGRMRKRVARMLTVKREREIEEG 121

Query: 387 IKKRLSRKLDRQWKKSIVVRPPPSLRKMQ 473
           I KRLSRKLDRQWKKSIVVRPPPSL+K+Q
Sbjct: 122 INKRLSRKLDRQWKKSIVVRPPPSLKKLQ 150


>gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]
          Length = 178

 Score =  182 bits (462), Expect = 6e-44
 Identities = 103/158 (65%), Positives = 117/158 (74%), Gaps = 11/158 (6%)
 Frame = +3

Query: 33  LSLTVPTATTFASKSLSIITPKSSSFSGIRI----------CIPNLRT-QXXXXXXVVMM 179
           LS+  P++ T   K +   + KS+ F GIRI          C   +R         VVMM
Sbjct: 4   LSIASPSSVTLPPKPILSASSKST-FHGIRISHLCPARTALCARYVRNPSFFFFSLVVMM 62

Query: 180 AKREEELKGIRAKTTEEINEEIIDLKGELLMLRLQKSAREEFKNSEFGRMRKRVARMLTV 359
           AKREEELK IR KTTEEINEEI+DLKGEL MLRLQKSAR EFK+SEF RMRKR+ARMLTV
Sbjct: 63  AKREEELKEIRTKTTEEINEEIVDLKGELFMLRLQKSARNEFKSSEFRRMRKRIARMLTV 122

Query: 360 RRERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQ 473
           +RERE+EEGI KRLSRKLDRQWKKSIVVRPPPSL+K+Q
Sbjct: 123 KREREIEEGINKRLSRKLDRQWKKSIVVRPPPSLKKLQ 160


>ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Cucumis
           sativus] gi|449508367|ref|XP_004163294.1| PREDICTED: 50S
           ribosomal protein L29, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  177 bits (448), Expect = 3e-42
 Identities = 96/152 (63%), Positives = 116/152 (76%), Gaps = 8/152 (5%)
 Frame = +3

Query: 42  TVPTATTFASKSLSIITPKSSSFSGIRICIP--------NLRTQXXXXXXVVMMAKREEE 197
           ++P+     SK L+  +   SSF+ ++I  P           T       VVMMAKRE+E
Sbjct: 8   SLPSTLPIPSKFLN--STSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDE 65

Query: 198 LKGIRAKTTEEINEEIIDLKGELLMLRLQKSAREEFKNSEFGRMRKRVARMLTVRREREL 377
           LK IR+KTTEEINEE+IDLKGELLMLRLQKSAR EFK+SEF RMRKR++RMLTVRRERE+
Sbjct: 66  LKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREI 125

Query: 378 EEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQ 473
           EEG+ KRLSRKLDR+WKKSIVVRPPPSL+K++
Sbjct: 126 EEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLR 157


>gb|AEO36436.1| hypothetical protein [Amblyomma maculatum]
          Length = 155

 Score =  175 bits (443), Expect = 1e-41
 Identities = 94/127 (74%), Positives = 104/127 (81%), Gaps = 3/127 (2%)
 Frame = +3

Query: 102 SSFSGIRI---CIPNLRTQXXXXXXVVMMAKREEELKGIRAKTTEEINEEIIDLKGELLM 272
           SSF+G+RI    I    +        + MAKREEELK IRAKTTEEINEEI+DLKGEL M
Sbjct: 15  SSFNGLRIRTAAISIKPSPLFSPTKTIKMAKREEELKDIRAKTTEEINEEIVDLKGELFM 74

Query: 273 LRLQKSAREEFKNSEFGRMRKRVARMLTVRRERELEEGIKKRLSRKLDRQWKKSIVVRPP 452
           LRLQ+SAR EFK+SEF RMRKRVARMLTVRRERELEEGI KRLSRKLD++WK+SIVVRPP
Sbjct: 75  LRLQRSARNEFKSSEFRRMRKRVARMLTVRRERELEEGINKRLSRKLDKKWKRSIVVRPP 134

Query: 453 PSLRKMQ 473
           PSLRK Q
Sbjct: 135 PSLRKKQ 141


>ref|XP_002532831.1| 50S ribosomal protein L29, chloroplast precursor, putative [Ricinus
           communis] gi|223527398|gb|EEF29538.1| 50S ribosomal
           protein L29, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  174 bits (440), Expect = 2e-41
 Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 9/157 (5%)
 Frame = +3

Query: 30  MLSLTVPTATTFASKSLSIITPKSSSFSGIRI---CIPNLRT------QXXXXXXVVMMA 182
           MLSL++   T+F+ K LS + PKSS FSGI+I   C   +R              V+ M+
Sbjct: 1   MLSLSI---TSFSPKPLSPV-PKSS-FSGIQIRHTCSIPMRVPVKTTWSFSGKPLVITMS 55

Query: 183 KREEELKGIRAKTTEEINEEIIDLKGELLMLRLQKSAREEFKNSEFGRMRKRVARMLTVR 362
           KR+EELK IR  +TE+INEE++DLKGEL MLRLQKSAR EFK+SEF RMRKR+ARMLTV+
Sbjct: 56  KRQEELKEIREMSTEQINEEVVDLKGELFMLRLQKSARNEFKSSEFRRMRKRIARMLTVK 115

Query: 363 RERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQ 473
           RERE+EEGI KRLSRK DRQWKKSIVVRPPPSL+K+Q
Sbjct: 116 REREIEEGINKRLSRKFDRQWKKSIVVRPPPSLKKLQ 152