BLASTX nr result

ID: Coptis24_contig00001932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001932
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   592   e-166
emb|CBI28315.3| unnamed protein product [Vitis vinifera]              578   e-162
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   569   e-159
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218...   569   e-159
ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|2...   561   e-157

>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
            vinifera]
          Length = 503

 Score =  592 bits (1525), Expect = e-166
 Identities = 304/456 (66%), Positives = 346/456 (75%), Gaps = 6/456 (1%)
 Frame = -1

Query: 1711 KEVEPEKPAETENPVEPEEQVDLDGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1532
            K VEPEK +E E P+E +E+VDLD DN                                 
Sbjct: 13   KPVEPEKLSEPEKPIESDERVDLDEDNDPDEAMDEEVEYEEVEVEEEVEEVEEEVEEEEV 72

Query: 1531 XXXXXXXXXXXXXQASPGADQDMKASD----VEDDEESRKHAELLAIPPHGSEVYVGGIP 1364
                         + +  AD+    S     +ED++ES+KHAELLA+PPHGSEVYVGGI 
Sbjct: 73   EEEEEEVEEEEEEEEANEADEQKSPSGGGGKIEDEDESKKHAELLALPPHGSEVYVGGIS 132

Query: 1363 HDASEKDLKGFCESVGEVTEVRMMKGKDSRENKGYAFVTFRTKDLAAKAIEDLNNTEFQG 1184
             DASE+DLK FCESVGEVTEVR+MKGKDS ENKG+AFVTFR  +LA+KAIE+LNNTEF+G
Sbjct: 133  QDASEEDLKSFCESVGEVTEVRIMKGKDSGENKGFAFVTFRNVELASKAIEELNNTEFKG 192

Query: 1183 KRIKCSTSQAKHKLFIGNVPRSWGEDDLKKIVTEIGPGVNAIELLKDPQNSSRNRGFAFI 1004
            ++IKCSTSQAKH+LFIGNVPRSWGE+D+KK+VTEIGPGV A+EL+KD +NSS NRGFAFI
Sbjct: 193  RKIKCSTSQAKHRLFIGNVPRSWGEEDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFI 252

Query: 1003 DYYNHACAEYSRQKMSIPKFKLESNAPTVSWADPKNAESSAASQVKAVYVKNLPKNVNQD 824
            DYYNHACAEYSRQKM  PKFKL++NAPTVSWADPKNA+SS ASQVKAVYVKNLPKN+ QD
Sbjct: 253  DYYNHACAEYSRQKMMNPKFKLDNNAPTVSWADPKNADSSPASQVKAVYVKNLPKNITQD 312

Query: 823  QLRELFEHHGEITKVVLPPAKPGQEKNRFGFVHFAERSSAMKALKNTEKYELDGQVLECS 644
            QL++LFEHHG+ITKVVLPPAK GQEK+R GFVHFAERSSAMKALKNTEKYE+DGQVLECS
Sbjct: 313  QLKQLFEHHGKITKVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECS 372

Query: 643  LAKPQNDGKANG--SAQKSSLLPSYPPRMXXXXXXXXXXXXXXXXXXXXXXXGFGQPLIY 470
            LAKPQ D K+ G  ++QKS LL SYPPR+                       GF QPLIY
Sbjct: 373  LAKPQADQKSVGGSNSQKSGLLSSYPPRV----GYGFVGGAYGALGAGYGTAGFAQPLIY 428

Query: 469  GRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQPHTPP 362
            GRGPTP+GMAMMPMLLPDGRIGYVLQQPGAQPHTPP
Sbjct: 429  GRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQPHTPP 464


>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  578 bits (1491), Expect = e-162
 Identities = 284/366 (77%), Positives = 320/366 (87%), Gaps = 2/366 (0%)
 Frame = -1

Query: 1453 DVEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSR 1274
            ++ED++ES+KHAELLA+PPHGSEVYVGGI  DASE+DLK FCESVGEVTEVR+MKGKDS 
Sbjct: 34   EIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSG 93

Query: 1273 ENKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKK 1094
            ENKG+AFVTFR  +LA+KAIE+LNNTEF+G++IKCSTSQAKH+LFIGNVPRSWGE+D+KK
Sbjct: 94   ENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKK 153

Query: 1093 IVTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVS 914
            +VTEIGPGV A+EL+KD +NSS NRGFAFIDYYNHACAEYSRQKM  PKFKL++NAPTVS
Sbjct: 154  VVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVS 213

Query: 913  WADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFG 734
            WADPKNA+SS ASQVKAVYVKNLPKN+ QDQL++LFEHHG+ITKVVLPPAK GQEK+R G
Sbjct: 214  WADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIG 273

Query: 733  FVHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQKSSLLPSYPPRMX 560
            FVHFAERSSAMKALKNTEKYE+DGQVLECSLAKPQ D K+ G  ++QKS LL SYPPR+ 
Sbjct: 274  FVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRV- 332

Query: 559  XXXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGA 380
                                  GF QPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPGA
Sbjct: 333  ---GYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGA 389

Query: 379  QPHTPP 362
            QPHTPP
Sbjct: 390  QPHTPP 395


>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  569 bits (1466), Expect = e-159
 Identities = 277/365 (75%), Positives = 319/365 (87%), Gaps = 1/365 (0%)
 Frame = -1

Query: 1450 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1271
            + D++E++KHAELLA+PPHGSEVYVGGIP D+SE DL+ FCES+GEVTEVR+M+ K+S E
Sbjct: 419  INDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNE 478

Query: 1270 NKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1091
            NKG+AFVTFR+ +LA+KAI++LNNTEF+GK+IKCS+SQAKH+LFIGNVPRSWGE+DLKK+
Sbjct: 479  NKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 538

Query: 1090 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 911
            VTEIGPGV A+EL+KD +N+S NRGFAFIDYYNHACAEYSRQKM  PKFKL+ NAPTVSW
Sbjct: 539  VTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSW 598

Query: 910  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 731
            ADPKNA+SSAASQVKAVYVKNLPKNV Q+QL++LF+HHG+ITKVVLPPAK GQEKNR GF
Sbjct: 599  ADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGF 658

Query: 730  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANGS-AQKSSLLPSYPPRMXXX 554
            VHF+ERSSAMKALKNTEKYELDGQVLECSLAKPQ D K+ GS +QKS LLP+YPPR+   
Sbjct: 659  VHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRV--- 715

Query: 553  XXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQP 374
                                GFGQPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPG+Q 
Sbjct: 716  -GYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM 774

Query: 373  HTPPP 359
             TPPP
Sbjct: 775  LTPPP 779


>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
          Length = 784

 Score =  569 bits (1466), Expect = e-159
 Identities = 277/365 (75%), Positives = 319/365 (87%), Gaps = 1/365 (0%)
 Frame = -1

Query: 1450 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1271
            + D++E++KHAELLA+PPHGSEVYVGGIP D+SE DL+ FCES+GEVTEVR+M+ K+S E
Sbjct: 375  INDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNE 434

Query: 1270 NKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1091
            NKG+AFVTFR+ +LA+KAI++LNNTEF+GK+IKCS+SQAKH+LFIGNVPRSWGE+DLKK+
Sbjct: 435  NKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 494

Query: 1090 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 911
            VTEIGPGV A+EL+KD +N+S NRGFAFIDYYNHACAEYSRQKM  PKFKL+ NAPTVSW
Sbjct: 495  VTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSW 554

Query: 910  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 731
            ADPKNA+SSAASQVKAVYVKNLPKNV Q+QL++LF+HHG+ITKVVLPPAK GQEKNR GF
Sbjct: 555  ADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGF 614

Query: 730  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANGS-AQKSSLLPSYPPRMXXX 554
            VHF+ERSSAMKALKNTEKYELDGQVLECSLAKPQ D K+ GS +QKS LLP+YPPR+   
Sbjct: 615  VHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRV--- 671

Query: 553  XXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQP 374
                                GFGQPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPG+Q 
Sbjct: 672  -GYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM 730

Query: 373  HTPPP 359
             TPPP
Sbjct: 731  LTPPP 735


>ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|222854448|gb|EEE91995.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  561 bits (1446), Expect = e-157
 Identities = 273/379 (72%), Positives = 323/379 (85%), Gaps = 2/379 (0%)
 Frame = -1

Query: 1489 ASPGADQDMKASDVEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEV 1310
            AS  AD    +   E+++E RKH+ELLA+PPHGSEVY+GGIP DASE+DLK FCES+GEV
Sbjct: 35   ASDEADSPKGSDGDEEEDEHRKHSELLALPPHGSEVYLGGIPPDASEEDLKEFCESIGEV 94

Query: 1309 TEVRMMKGKDSRENKGYAFVTFRTKDLAAKAIEDLNNTEFQGKRIKCSTSQAKHKLFIGN 1130
            TE+R+MKGKDS E+KGYAFVTFRTK+LA+KAIE+LNNTEF+GK++KCSTSQA H+LFIGN
Sbjct: 95   TEIRIMKGKDSSESKGYAFVTFRTKELASKAIEELNNTEFKGKKVKCSTSQANHRLFIGN 154

Query: 1129 VPRSWGEDDLKKIVTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIP 950
            VPR+WGE+D+KK V + GPGVN++ELLKDPQN SRNRGFAFI+YYNHACAEYSR+ MS P
Sbjct: 155  VPRNWGEEDMKKAVKKTGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYSRKMMSSP 214

Query: 949  KFKLESNAPTVSWADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLP 770
            +FKL+ NAPTVSWADPKNA SSAASQVKAVYVKNLP+++NQD+LR+LFEHHG++TKVVLP
Sbjct: 215  EFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLPEDINQDRLRQLFEHHGKVTKVVLP 274

Query: 769  PAKPGQEKNRFGFVHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQK 596
            PAKPG EK+RFGFVHFAERSSAMKALKNTEKY++DGQVL+CSLAKPQ D K++G  ++QK
Sbjct: 275  PAKPGHEKSRFGFVHFAERSSAMKALKNTEKYKIDGQVLDCSLAKPQADLKSSGGPNSQK 334

Query: 595  SSLLPSYPPRMXXXXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPD 416
            SS   S+PPR+                       GF QP+IYGRGPTP+GM+MMPMLLPD
Sbjct: 335  SSPHSSFPPRV----GYSLVGSSYGALGAGFGAAGFAQPVIYGRGPTPAGMSMMPMLLPD 390

Query: 415  GRIGYVLQQPGAQPHTPPP 359
            GRIGYVLQQPG Q H+PPP
Sbjct: 391  GRIGYVLQQPGMQMHSPPP 409


Top