BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001910
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77038.1| unknown [Picea sitchensis]                             238   4e-60
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   236   1e-59
emb|CBI30239.3| unnamed protein product [Vitis vinifera]              236   1e-59
gb|ABR17193.1| unknown [Picea sitchensis]                             234   6e-59
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  234   6e-59

>gb|ADE77038.1| unknown [Picea sitchensis]
          Length = 334

 Score =  238 bits (607), Expect = 4e-60
 Identities = 111/136 (81%), Positives = 120/136 (88%)
 Frame = +1

Query: 79  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 258
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHT+PSISPT+LLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMITP 60

Query: 259 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 438
           GMDPQG A+DP++IQ               KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GMDPQGHALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 439 HAAAAVQSLTGRFYAG 486
           HAAAA+Q+LTGRFYAG
Sbjct: 121 HAAAALQALTGRFYAG 136


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  236 bits (603), Expect = 1e-59
 Identities = 113/136 (83%), Positives = 119/136 (87%)
 Frame = +1

Query: 79  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 258
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 259 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 438
           G+DPQGQ +DPR+IQ              SKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 439 HAAAAVQSLTGRFYAG 486
           HAA A+++L GRFYAG
Sbjct: 121 HAANALRNLNGRFYAG 136



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = +2

Query: 896  PARDGSAERRARIEQWNREKEQAESGNKNNDKHPSSDDYEKNGYSPNGEQFYDQNHHXXX 1075
            P R+GSAERRA+IEQWNRE+EQAE+ NKN++ H S +    N +  + +Q+Y+  H    
Sbjct: 273  PVREGSAERRAKIEQWNREREQAEATNKNDNSH-SDNGNNNNDFEQDDQQYYNPQHQ-EE 330

Query: 1076 XXXXXXXEGGYDY 1114
                    GGY+Y
Sbjct: 331  DQQQQQQHGGYNY 343


>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  236 bits (603), Expect = 1e-59
 Identities = 113/136 (83%), Positives = 119/136 (87%)
 Frame = +1

Query: 79  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 258
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 259 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 438
           G+DPQGQ +DPR+IQ              SKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 439 HAAAAVQSLTGRFYAG 486
           HAA A+++L GRFYAG
Sbjct: 121 HAANALRNLNGRFYAG 136


>gb|ABR17193.1| unknown [Picea sitchensis]
          Length = 344

 Score =  234 bits (597), Expect = 6e-59
 Identities = 110/135 (81%), Positives = 117/135 (86%)
 Frame = +1

Query: 79  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 258
           MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLHT+PSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHTRPSISPTLLLSNMYQRPDMITP 60

Query: 259 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 438
           GMDPQG A+DPR+IQ               KYG IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GMDPQGHALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 439 HAAAAVQSLTGRFYA 483
           HAAAA+Q+LTGRFYA
Sbjct: 121 HAAAALQALTGRFYA 135


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  234 bits (597), Expect = 6e-59
 Identities = 110/136 (80%), Positives = 119/136 (87%)
 Frame = +1

Query: 79  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 258
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 259 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 438
           G+DPQGQ +DPR+IQ              SKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 439 HAAAAVQSLTGRFYAG 486
           HA  A+++L+GRFYAG
Sbjct: 121 HAGEALRNLSGRFYAG 136



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 44/146 (30%), Positives = 56/146 (38%)
 Frame = +2

Query: 617  GGYCNFMHLKKISXXXXXXXXXXXXXXXXXXXXXXPHKNRNYEEXXXXXXXXXXXXXXXX 796
            GGYCNFMHLKKIS                      P  +R + +                
Sbjct: 165  GGYCNFMHLKKISRELRRQLFGRYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRN 224

Query: 797  XXXXNRVXXXXXXXXXXXXXXXXXXXXXXXXXPPARDGSAERRARIEQWNREKEQAESGN 976
                ++                           P R+ S ERRA+I QWNREKEQA++G 
Sbjct: 225  QRYHDK--GRRPRSRSPGHRGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTG- 281

Query: 977  KNNDKHPSSDDYEKNGYSPNGEQFYD 1054
             NND +    D   NG+  NGE +YD
Sbjct: 282  -NNDVNHDVTDNHANGFQDNGEDYYD 306