BLASTX nr result

ID: Coptis24_contig00001887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001887
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001048378.1| Os02g0794600 [Oryza sativa Japonica Group] g...   114   7e-23
ref|NP_001063198.1| Os09g0420700 [Oryza sativa Japonica Group] g...   107   9e-21
gb|ACG35110.1| cytochrome c oxidase copper chaperone [Zea mays]       107   9e-21
ref|XP_003578132.1| PREDICTED: cytochrome c oxidase copper chape...   105   2e-20
ref|XP_004133710.1| PREDICTED: cytochrome c oxidase copper chape...   105   3e-20

>ref|NP_001048378.1| Os02g0794600 [Oryza sativa Japonica Group]
           gi|47497218|dbj|BAD19263.1| putative copper chaperone
           COX17-1 [Oryza sativa Japonica Group]
           gi|47497602|dbj|BAD19672.1| putative copper chaperone
           COX17-1 [Oryza sativa Japonica Group]
           gi|113537909|dbj|BAF10292.1| Os02g0794600 [Oryza sativa
           Japonica Group] gi|218191738|gb|EEC74165.1| hypothetical
           protein OsI_09266 [Oryza sativa Indica Group]
           gi|222623833|gb|EEE57965.1| hypothetical protein
           OsJ_08703 [Oryza sativa Japonica Group]
          Length = 79

 Score =  114 bits (284), Expect = 7e-23
 Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
 Frame = +2

Query: 701 MGSTEIGLP--TPSTMAVPELGSPTTEKPVSDTKPKKKICCACPDTKRLRDECIVEHGEA 874
           MGSTE  +P  +P+   V E GS     P +D+KPKKKICCACPDTKRLRDECIVEHGE+
Sbjct: 1   MGSTEHPIPAQSPACPTVSEGGS-AAPAPATDSKPKKKICCACPDTKRLRDECIVEHGES 59

Query: 875 ACAKWIRAHRECLRAEGFNI 934
           AC KWI AH+ CLRAEGFN+
Sbjct: 60  ACTKWIEAHKRCLRAEGFNV 79


>ref|NP_001063198.1| Os09g0420700 [Oryza sativa Japonica Group]
           gi|50725970|dbj|BAD33497.1| copper chaperone
           COX17-1-like protein [Oryza sativa Japonica Group]
           gi|113631431|dbj|BAF25112.1| Os09g0420700 [Oryza sativa
           Japonica Group] gi|218202159|gb|EEC84586.1| hypothetical
           protein OsI_31395 [Oryza sativa Indica Group]
           gi|222641589|gb|EEE69721.1| hypothetical protein
           OsJ_29395 [Oryza sativa Japonica Group]
          Length = 73

 Score =  107 bits (266), Expect = 9e-21
 Identities = 49/78 (62%), Positives = 56/78 (71%)
 Frame = +2

Query: 701 MGSTEIGLPTPSTMAVPELGSPTTEKPVSDTKPKKKICCACPDTKRLRDECIVEHGEAAC 880
           MG+T  G    S          T + P +DTKPKKKICCACPDTK+LRDECIV+HGE AC
Sbjct: 1   MGNTASGATEASDST-----EKTEQAPPADTKPKKKICCACPDTKKLRDECIVQHGEDAC 55

Query: 881 AKWIRAHRECLRAEGFNI 934
            KWI AHR+CLRAEGFN+
Sbjct: 56  GKWIEAHRQCLRAEGFNV 73


>gb|ACG35110.1| cytochrome c oxidase copper chaperone [Zea mays]
          Length = 84

 Score =  107 bits (266), Expect = 9e-21
 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
 Frame = +2

Query: 722 LPTPSTMAVPEL--------GSPTTEKPVSDTKPKKKICCACPDTKRLRDECIVEHGEAA 877
           LP P T+ +PE          + T   P + +KPKKKICCACPDTKRLRDEC+VEHGE A
Sbjct: 6   LPLPVTVTLPETPAVNGEGSSAATAAAPGAGSKPKKKICCACPDTKRLRDECVVEHGEPA 65

Query: 878 CAKWIRAHRECLRAEGFNI 934
           C KWI AH+ CLRAEGFN+
Sbjct: 66  CTKWIEAHKRCLRAEGFNV 84


>ref|XP_003578132.1| PREDICTED: cytochrome c oxidase copper chaperone-like [Brachypodium
           distachyon]
          Length = 73

 Score =  105 bits (263), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +2

Query: 737 TMAVPELGSPTTEKPVSDTKPKKKICCACPDTKRLRDECIVEHGEAACAKWIRAHRECLR 916
           T   P+      + P +DTKPKKKICCACPDTK+LRDECIV+HGE AC KWI AHR+CLR
Sbjct: 8   TSDAPDSAEEAGQAPAADTKPKKKICCACPDTKKLRDECIVQHGEDACGKWIEAHRQCLR 67

Query: 917 AEGFNI 934
           AEGF +
Sbjct: 68  AEGFKV 73


>ref|XP_004133710.1| PREDICTED: cytochrome c oxidase copper chaperone-like isoform 1
           [Cucumis sativus] gi|449431846|ref|XP_004133711.1|
           PREDICTED: cytochrome c oxidase copper chaperone-like
           isoform 2 [Cucumis sativus]
           gi|449431848|ref|XP_004133712.1| PREDICTED: cytochrome c
           oxidase copper chaperone-like isoform 3 [Cucumis
           sativus]
          Length = 80

 Score =  105 bits (262), Expect = 3e-20
 Identities = 51/78 (65%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
 Frame = +2

Query: 719 GLP---TPSTMAVPELG---SPTTEKPVSDTKPKKKICCACPDTKRLRDECIVEHGEAAC 880
           GLP   + S +A+PE     + T  K   D KPKKKICCACPDTK+LRDECIVEHGE AC
Sbjct: 3   GLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEAC 62

Query: 881 AKWIRAHRECLRAEGFNI 934
            KWI AHR+CLRAEGFN+
Sbjct: 63  GKWIEAHRKCLRAEGFNV 80


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