BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001863
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33900.1| unnamed protein product [Thellungiella halophila]     132   2e-29
ref|NP_201477.1| succinate dehydrogenase [ubiquinone] flavoprote...   132   3e-29
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_003611986.1| Succinate dehydrogenase [Medicago truncatula...   132   4e-29
ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [S...   132   4e-29

>dbj|BAJ33900.1| unnamed protein product [Thellungiella halophila]
          Length = 626

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 AGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGA 27
           AGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV IKGDDPD++VPGLMAAGEAACASVHGA
Sbjct: 372 AGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGA 431

Query: 26  NRLGANAL 3
           NRLGAN+L
Sbjct: 432 NRLGANSL 439


>ref|NP_201477.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1
           [Arabidopsis thaliana]
           gi|20454872|sp|O82663.1|DHSA1_ARATH RecName:
           Full=Succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial; AltName: Full=Flavoprotein
           subunit 1 of complex II; Short=FP; Flags: Precursor
           gi|13605885|gb|AAK32928.1|AF367341_1 AT5g66760/MSN2_16
           [Arabidopsis thaliana]
           gi|16930699|gb|AAL32015.1|AF436833_1 AT5g66760/MSN2_16
           [Arabidopsis thaliana] gi|3660471|emb|CAA05025.1|
           succinate dehydrogenase flavoprotein alpha subunit
           [Arabidopsis thaliana] gi|8843734|dbj|BAA97282.1|
           succinate dehydrogenase flavoprotein alpha subunit
           [Arabidopsis thaliana] gi|15010746|gb|AAK74032.1|
           AT5g66760/MSN2_16 [Arabidopsis thaliana]
           gi|21700795|gb|AAM70521.1| AT5g66760/MSN2_16
           [Arabidopsis thaliana] gi|332010877|gb|AED98260.1|
           succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1 [Arabidopsis thaliana]
          Length = 634

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 AGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGA 27
           AGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV IKGDDPD+++PGLMAAGEAACASVHGA
Sbjct: 380 AGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGA 439

Query: 26  NRLGANAL 3
           NRLGAN+L
Sbjct: 440 NRLGANSL 447


>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 AGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGA 27
           AGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV IKGDDPD+++PGLMAAGEAACASVHGA
Sbjct: 379 AGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGA 438

Query: 26  NRLGANAL 3
           NRLGAN+L
Sbjct: 439 NRLGANSL 446


>ref|XP_003611986.1| Succinate dehydrogenase [Medicago truncatula]
           gi|355513321|gb|AES94944.1| Succinate dehydrogenase
           [Medicago truncatula]
          Length = 626

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 AGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGA 27
           AGVDVT+EPIPVL TVHYNMGGIPTN+HGEVV IKGDDPD+LVPGLMAAGEAACASVHGA
Sbjct: 372 AGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDALVPGLMAAGEAACASVHGA 431

Query: 26  NRLGANAL 3
           NRLGAN+L
Sbjct: 432 NRLGANSL 439


>ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [Sorghum bicolor]
           gi|241917660|gb|EER90804.1| hypothetical protein
           SORBIDRAFT_01g006490 [Sorghum bicolor]
          Length = 620

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 AGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGA 27
           AGVDVT+EPIPVL TVHYNMGGIPTNYHGEV+ IKGDDPD++VPGLMAAGEAACASVHGA
Sbjct: 366 AGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLHIKGDDPDAVVPGLMAAGEAACASVHGA 425

Query: 26  NRLGANAL 3
           NRLGAN+L
Sbjct: 426 NRLGANSL 433