BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001837
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139219.1| PREDICTED: 40S ribosomal protein S24-2-like ...   177   6e-43
gb|ADN33912.1| 40S ribosomal protein s24 [Cucumis melo subsp. melo]   177   6e-43
gb|ADR71267.1| 40S ribosomal protein S24B [Hevea brasiliensis] g...   177   8e-43
ref|XP_002315773.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
gb|ABK93908.1| unknown [Populus trichocarpa]                          177   1e-42

>ref|XP_004139219.1| PREDICTED: 40S ribosomal protein S24-2-like [Cucumis sativus]
           gi|449482936|ref|XP_004156448.1| PREDICTED: 40S
           ribosomal protein S24-2-like [Cucumis sativus]
          Length = 137

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/97 (90%), Positives = 94/97 (96%)
 Frame = +2

Query: 35  MADSGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLSKIYEVKDPNSIF 214
           MAD  KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKL +IY+VKDPN+IF
Sbjct: 1   MAD--KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIF 58

Query: 215 VFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIR 325
           VFKFRTHFGGGKSTGFGLIYDSV++AKK+EPKYRLIR
Sbjct: 59  VFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIR 95


>gb|ADN33912.1| 40S ribosomal protein s24 [Cucumis melo subsp. melo]
          Length = 137

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/97 (89%), Positives = 95/97 (97%)
 Frame = +2

Query: 35  MADSGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLSKIYEVKDPNSIF 214
           MAD  KAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL++IY+VKDPN+IF
Sbjct: 1   MAD--KAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDPNAIF 58

Query: 215 VFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIR 325
           VFKFRTHFGGGKSTGFGLIYDSV++AKK+EPKYRLIR
Sbjct: 59  VFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIR 95


>gb|ADR71267.1| 40S ribosomal protein S24B [Hevea brasiliensis]
           gi|313586515|gb|ADR71268.1| 40S ribosomal protein S24C
           [Hevea brasiliensis]
          Length = 137

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/97 (89%), Positives = 94/97 (96%)
 Frame = +2

Query: 35  MADSGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLSKIYEVKDPNSIF 214
           MAD  KAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL+ +YEVKDPN+IF
Sbjct: 1   MAD--KAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLASLYEVKDPNTIF 58

Query: 215 VFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIR 325
           VFKFRTHFGGGKSTGFGLIYDSV++AKK+EPKYRLIR
Sbjct: 59  VFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIR 95


>ref|XP_002315773.1| predicted protein [Populus trichocarpa] gi|222864813|gb|EEF01944.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/94 (91%), Positives = 91/94 (96%)
 Frame = +2

Query: 44  SGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLSKIYEVKDPNSIFVFK 223
           S KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKL+ +YEVKDPNSIFVFK
Sbjct: 2   SDKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASLYEVKDPNSIFVFK 61

Query: 224 FRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIR 325
           FRTHFGGGKSTGFGLIYDSV+SAKK+EPKYRLIR
Sbjct: 62  FRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIR 95


>gb|ABK93908.1| unknown [Populus trichocarpa]
          Length = 134

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/94 (91%), Positives = 91/94 (96%)
 Frame = +2

Query: 44  SGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLSKIYEVKDPNSIFVFK 223
           S KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKL+ +YEVKDPNSIFVFK
Sbjct: 2   SDKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASLYEVKDPNSIFVFK 61

Query: 224 FRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIR 325
           FRTHFGGGKSTGFGLIYDSV+SAKK+EPKYRLIR
Sbjct: 62  FRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIR 95