BLASTX nr result

ID: Coptis24_contig00001826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001826
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268764.1| PREDICTED: patellin-4 isoform 1 [Vitis vinif...   436   e-146
emb|CBI31068.3| unnamed protein product [Vitis vinifera]              436   e-146
emb|CAN83643.1| hypothetical protein VITISV_004911 [Vitis vinifera]   436   e-146
ref|XP_003633046.1| PREDICTED: patellin-4 isoform 2 [Vitis vinif...   431   e-144
ref|XP_002299019.1| predicted protein [Populus trichocarpa] gi|2...   409   e-137

>ref|XP_002268764.1| PREDICTED: patellin-4 isoform 1 [Vitis vinifera]
          Length = 493

 Score =  436 bits (1121), Expect(2) = e-146
 Identities = 213/279 (76%), Positives = 245/279 (87%), Gaps = 3/279 (1%)
 Frame = -2

Query: 1311 EEVIDKEISLWGVPLLPSKCAVGTDVVLLKFLRARDFKVNEALEMLIKTLQWRKEYKSDS 1132
            EEV+D++I+LWGVPLLPSKCA G DV+LLKFLRAR+FKVNEA EML KTL+WRKE+K+DS
Sbjct: 142  EEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEMLKKTLEWRKEFKTDS 201

Query: 1131 LLDEDISLPLDSVAYMDGLDREGHPICYNVYGGFQSDDLYQKTFGTEEQREQFLRWRIQL 952
            +L+E++   + SVAYM+G+DREGHPICYN+YG  ++ +LYQKTFGTEE+R QFLRWRIQL
Sbjct: 202  ILEEELGQDISSVAYMNGVDREGHPICYNIYGVLENQELYQKTFGTEEKRNQFLRWRIQL 261

Query: 951  MEKGIQKLDFNPGGVCSLLQINDLKNTPGPSKKEFRVATKQAVELLQDNYPEFVARNIFI 772
            MEKGIQKLDF PGGV SLLQINDL N+PGPSKKE R+ATKQAV LLQDNYPEFVARNIFI
Sbjct: 262  MEKGIQKLDFKPGGVTSLLQINDLSNSPGPSKKEIRIATKQAVGLLQDNYPEFVARNIFI 321

Query: 771  NVPFWYYAFNALLSPFFTQRTKSKFVFARPASVTETLLKYIPAGEIPTKYGGFKKDKNDK 592
            NVPFWYYA NALLSPF TQRTKSKFVF RP+ VTETLLKYI   EIP +YGG K++K D 
Sbjct: 322  NVPFWYYALNALLSPFLTQRTKSKFVFVRPSKVTETLLKYICVEEIPVQYGGLKREK-DT 380

Query: 591  EFS--DEKISELIVKSGSTETIEIPI-EVGTYLVWDLTV 484
            EFS  D  ++EL+VK+GSTETIEIP+ EVGT LVWDLTV
Sbjct: 381  EFSIEDGGVTELVVKAGSTETIEIPVPEVGTTLVWDLTV 419



 Score =  110 bits (274), Expect(2) = e-146
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -1

Query: 484 LGWEVTYKEEFVPNDEGSYTIIVNKAKKKGSTAEAVRNTFSNNEPGKVVLTIENGSFKKK 305
           LGWEV YKEEFVP DEGSYTII+ K KK GS  E VRN+F NNEPGKVVLTIEN   KKK
Sbjct: 420 LGWEVNYKEEFVPADEGSYTIIIQKGKKMGSQEEPVRNSFRNNEPGKVVLTIENSVSKKK 479

Query: 304 RVLYRYKVMQSSS 266
           R+ YRYK    SS
Sbjct: 480 RIFYRYKTKNCSS 492


>emb|CBI31068.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  436 bits (1121), Expect(2) = e-146
 Identities = 213/279 (76%), Positives = 245/279 (87%), Gaps = 3/279 (1%)
 Frame = -2

Query: 1311 EEVIDKEISLWGVPLLPSKCAVGTDVVLLKFLRARDFKVNEALEMLIKTLQWRKEYKSDS 1132
            EEV+D++I+LWGVPLLPSKCA G DV+LLKFLRAR+FKVNEA EML KTL+WRKE+K+DS
Sbjct: 101  EEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEMLKKTLEWRKEFKTDS 160

Query: 1131 LLDEDISLPLDSVAYMDGLDREGHPICYNVYGGFQSDDLYQKTFGTEEQREQFLRWRIQL 952
            +L+E++   + SVAYM+G+DREGHPICYN+YG  ++ +LYQKTFGTEE+R QFLRWRIQL
Sbjct: 161  ILEEELGQDISSVAYMNGVDREGHPICYNIYGVLENQELYQKTFGTEEKRNQFLRWRIQL 220

Query: 951  MEKGIQKLDFNPGGVCSLLQINDLKNTPGPSKKEFRVATKQAVELLQDNYPEFVARNIFI 772
            MEKGIQKLDF PGGV SLLQINDL N+PGPSKKE R+ATKQAV LLQDNYPEFVARNIFI
Sbjct: 221  MEKGIQKLDFKPGGVTSLLQINDLSNSPGPSKKEIRIATKQAVGLLQDNYPEFVARNIFI 280

Query: 771  NVPFWYYAFNALLSPFFTQRTKSKFVFARPASVTETLLKYIPAGEIPTKYGGFKKDKNDK 592
            NVPFWYYA NALLSPF TQRTKSKFVF RP+ VTETLLKYI   EIP +YGG K++K D 
Sbjct: 281  NVPFWYYALNALLSPFLTQRTKSKFVFVRPSKVTETLLKYICVEEIPVQYGGLKREK-DT 339

Query: 591  EFS--DEKISELIVKSGSTETIEIPI-EVGTYLVWDLTV 484
            EFS  D  ++EL+VK+GSTETIEIP+ EVGT LVWDLTV
Sbjct: 340  EFSIEDGGVTELVVKAGSTETIEIPVPEVGTTLVWDLTV 378



 Score =  110 bits (274), Expect(2) = e-146
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -1

Query: 484 LGWEVTYKEEFVPNDEGSYTIIVNKAKKKGSTAEAVRNTFSNNEPGKVVLTIENGSFKKK 305
           LGWEV YKEEFVP DEGSYTII+ K KK GS  E VRN+F NNEPGKVVLTIEN   KKK
Sbjct: 379 LGWEVNYKEEFVPADEGSYTIIIQKGKKMGSQEEPVRNSFRNNEPGKVVLTIENSVSKKK 438

Query: 304 RVLYRYKVMQSSS 266
           R+ YRYK    SS
Sbjct: 439 RIFYRYKTKNCSS 451


>emb|CAN83643.1| hypothetical protein VITISV_004911 [Vitis vinifera]
          Length = 493

 Score =  436 bits (1120), Expect(2) = e-146
 Identities = 213/279 (76%), Positives = 245/279 (87%), Gaps = 3/279 (1%)
 Frame = -2

Query: 1311 EEVIDKEISLWGVPLLPSKCAVGTDVVLLKFLRARDFKVNEALEMLIKTLQWRKEYKSDS 1132
            EEV+D++I+LWGVPLLPSKCA G DV+LLKFLRAR+FKVNEA EML KTL+WRKE+K+DS
Sbjct: 142  EEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEMLKKTLEWRKEFKTDS 201

Query: 1131 LLDEDISLPLDSVAYMDGLDREGHPICYNVYGGFQSDDLYQKTFGTEEQREQFLRWRIQL 952
            +L+E++   + SVAYM+G+DREGHPICYN+YG  ++ +LYQKTFGTEE+R QFLRWRIQL
Sbjct: 202  ILEEELGQDISSVAYMNGVDREGHPICYNIYGVLENQELYQKTFGTEEKRNQFLRWRIQL 261

Query: 951  MEKGIQKLDFNPGGVCSLLQINDLKNTPGPSKKEFRVATKQAVELLQDNYPEFVARNIFI 772
            MEKGIQKLDF PGGV SLLQINDL N+PGPSKKE R+ATKQAV LLQDNYPEFVARNIFI
Sbjct: 262  MEKGIQKLDFKPGGVTSLLQINDLSNSPGPSKKEIRIATKQAVGLLQDNYPEFVARNIFI 321

Query: 771  NVPFWYYAFNALLSPFFTQRTKSKFVFARPASVTETLLKYIPAGEIPTKYGGFKKDKNDK 592
            NVPFWYYA NALLSPF TQRTKSKFVF RP+ VTETLLKYI   EIP +YGG K++K D 
Sbjct: 322  NVPFWYYALNALLSPFLTQRTKSKFVFVRPSKVTETLLKYICVEEIPXQYGGLKREK-DT 380

Query: 591  EFS--DEKISELIVKSGSTETIEIPI-EVGTYLVWDLTV 484
            EFS  D  ++EL+VK+GSTETIEIP+ EVGT LVWDLTV
Sbjct: 381  EFSIEDGGVTELVVKAGSTETIEIPVPEVGTTLVWDLTV 419



 Score =  109 bits (273), Expect(2) = e-146
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -1

Query: 484 LGWEVTYKEEFVPNDEGSYTIIVNKAKKKGSTAEAVRNTFSNNEPGKVVLTIENGSFKKK 305
           LGWEV YKEEFVP DEGSYTII+ K KK GS  E VRN+F NNEPGKVVLTIEN   KKK
Sbjct: 420 LGWEVNYKEEFVPADEGSYTIIIQKGKKMGSQEEPVRNSFLNNEPGKVVLTIENSVSKKK 479

Query: 304 RVLYRYKVMQSSS 266
           R+ YRYK    SS
Sbjct: 480 RIFYRYKTKNCSS 492


>ref|XP_003633046.1| PREDICTED: patellin-4 isoform 2 [Vitis vinifera]
          Length = 501

 Score =  431 bits (1108), Expect(2) = e-144
 Identities = 212/287 (73%), Positives = 244/287 (85%), Gaps = 11/287 (3%)
 Frame = -2

Query: 1311 EEVIDKEISLWGVPLLPSKCAVGTDVVLLKFLRARDFKVNEALEMLIKTLQWRKEYKSDS 1132
            EEV+D++I+LWGVPLLPSKCA G DV+LLKFLRAR+FKVNEA EML KTL+WRKE+K+DS
Sbjct: 142  EEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEMLKKTLEWRKEFKTDS 201

Query: 1131 LLDEDISLPLDSVAYMDGLDREGHPICYNVYGGFQSDDLYQKTFGTEEQREQFLRWRIQL 952
            +L+E++   + SVAYM+G+DREGHPICYN+YG  ++ +LYQKTFGTEE+R QFLRWRIQL
Sbjct: 202  ILEEELGQDISSVAYMNGVDREGHPICYNIYGVLENQELYQKTFGTEEKRNQFLRWRIQL 261

Query: 951  MEKGIQKLDFNPGGVCSLLQINDLKNTPGPSKKEFRVATKQAVELLQDNYPEFVARNIFI 772
            MEKGIQKLDF PGGV SLLQINDL N+PGPSKKE R+ATKQAV LLQDNYPEFVARNIFI
Sbjct: 262  MEKGIQKLDFKPGGVTSLLQINDLSNSPGPSKKEIRIATKQAVGLLQDNYPEFVARNIFI 321

Query: 771  NVPFWYYAFNALLSPFFTQRTKSKFVFARPASVTETLLKYIPAGEIPTKYGGFKKDKNDK 592
            NVPFWYYA NALLSPF TQRTKSKFVF RP+ VTETLLKYI   EIP +YGG K++K D 
Sbjct: 322  NVPFWYYALNALLSPFLTQRTKSKFVFVRPSKVTETLLKYICVEEIPVQYGGLKREK-DT 380

Query: 591  EFS--DEKISELIVKSGSTETIEIPI---------EVGTYLVWDLTV 484
            EFS  D  ++EL+VK+GSTETIEIP+          VGT LVWDLTV
Sbjct: 381  EFSIEDGGVTELVVKAGSTETIEIPVPEVCRKDLTHVGTTLVWDLTV 427



 Score =  110 bits (274), Expect(2) = e-144
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -1

Query: 484 LGWEVTYKEEFVPNDEGSYTIIVNKAKKKGSTAEAVRNTFSNNEPGKVVLTIENGSFKKK 305
           LGWEV YKEEFVP DEGSYTII+ K KK GS  E VRN+F NNEPGKVVLTIEN   KKK
Sbjct: 428 LGWEVNYKEEFVPADEGSYTIIIQKGKKMGSQEEPVRNSFRNNEPGKVVLTIENSVSKKK 487

Query: 304 RVLYRYKVMQSSS 266
           R+ YRYK    SS
Sbjct: 488 RIFYRYKTKNCSS 500


>ref|XP_002299019.1| predicted protein [Populus trichocarpa] gi|222846277|gb|EEE83824.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  409 bits (1050), Expect(2) = e-137
 Identities = 201/278 (72%), Positives = 233/278 (83%), Gaps = 3/278 (1%)
 Frame = -2

Query: 1308 EVIDKEISLWGVPLLPSKCAVGTDVVLLKFLRARDFKVNEALEMLIKTLQWRKEYKSDSL 1129
            E ID++IS+WGVPL PSK + GTDVVLLKFLRARDFKVN+ALEML KTLQWRKE   DSL
Sbjct: 175  EEIDRDISIWGVPLFPSKGSEGTDVVLLKFLRARDFKVNDALEMLKKTLQWRKESSIDSL 234

Query: 1128 LDEDISLPLDSVAYMDGLDREGHPICYNVYGGFQSDDLYQKTFGTEEQREQFLRWRIQLM 949
            LDE+I + L S  YM+G+DREGHP+CYN+YG F++++LY K FG EE+R+QFLRWR QLM
Sbjct: 235  LDEEIGVDLSSAFYMNGIDREGHPVCYNIYGVFENEELYAKAFGDEEKRKQFLRWRFQLM 294

Query: 948  EKGIQKLDFNPGGVCSLLQINDLKNTPGPSKKEFRVATKQAVELLQDNYPEFVARNIFIN 769
            EKGIQKLD  PGG+ SLLQI+DLKN+P PSKKE R A  +AV LLQDNYPEFVA+NIFIN
Sbjct: 295  EKGIQKLDLRPGGIASLLQISDLKNSPSPSKKELRTAMSKAVTLLQDNYPEFVAKNIFIN 354

Query: 768  VPFWYYAFNALLSPFFTQRTKSKFVFARPASVTETLLKYIPAGEIPTKYGGFKKDKNDKE 589
            VPFWYYAFNALLSPF  QRTKSKFV  RPA  TETLLKY+ A EIP +YGGFK++ ND E
Sbjct: 355  VPFWYYAFNALLSPFLAQRTKSKFVVVRPAKTTETLLKYVQAEEIPVQYGGFKRE-NDFE 413

Query: 588  FSDE--KISELIVKSGSTETIEIP-IEVGTYLVWDLTV 484
            FS E  ++SEL++K+GSTETIEIP  EVG  L+WDLTV
Sbjct: 414  FSSEDGEVSELVIKAGSTETIEIPAAEVGATLLWDLTV 451



 Score =  108 bits (269), Expect(2) = e-137
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = -1

Query: 484 LGWEVTYKEEFVPNDEGSYTIIVNKAKKKGSTAEAVRNTFSNNEPGKVVLTIENGSFKKK 305
           +GWEV YKEEFVP+DE SYTII+ K KK  S  E  RNTF NNEPGKVVLTI+N S KKK
Sbjct: 452 VGWEVNYKEEFVPSDEASYTIIIQKGKKMSSNEEPTRNTFRNNEPGKVVLTIQNWSSKKK 511

Query: 304 RVLYRYKVMQSSS 266
           RVLYRYK  +++S
Sbjct: 512 RVLYRYKTKKNAS 524


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