BLASTX nr result

ID: Coptis24_contig00001784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001784
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera]     478   e-132
emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera]   476   e-132
dbj|BAA03413.1| EDGP precursor [Daucus carota]                        471   e-130
ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|2...   468   e-129
pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|p...   466   e-129

>ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera]
          Length = 436

 Score =  478 bits (1229), Expect = e-132
 Identities = 242/413 (58%), Positives = 297/413 (71%)
 Frame = -3

Query: 1330 SFRPSALVLPVTKDVKTLQYVTTITQRTPPVLVKLVVDLGGQFVWIDCQSSYISSSYRPA 1151
            SFRP ALV+PV+KD  TLQY+TTI QRTP V VKLVVDLG QF+W+DC+ +Y+SSSYRPA
Sbjct: 25   SFRPDALVIPVSKDASTLQYLTTINQRTPLVPVKLVVDLGAQFLWVDCEQNYVSSSYRPA 84

Query: 1150 RCGSSQCKIANAHSFCSTCNNIPSPICSNNTCELSPQNGVTEFITGGDVTMDVLSLKSTN 971
            RC S+QC +A A+  C  C + P P C+NNTC + P N VT   T G++  D +S++ST+
Sbjct: 85   RCRSAQCSLARANG-CGDCFSAPRPGCNNNTCGVLPDNTVTRTATSGELAEDFVSVQSTD 143

Query: 970  GYKPGVSVSVPQFIFACTRSFLLEGLAEGTKGIAAFGRTRIALPTQLAAAFSLHRKFAMC 791
            G  PG  VSV +F+F+C  +FLLEGLA    G+A  GRTRIA P+Q A+AFS HRKFA C
Sbjct: 144  GSNPGRVVSVSKFLFSCAPTFLLEGLASSAMGMAGLGRTRIAFPSQFASAFSFHRKFATC 203

Query: 790  LSPSMEAPGAIFFGDGPYSFFPGSDVSKSLTYTKLINNPKSTNGVALRGEPSFEYFIGVT 611
            LS S  A G +FFGDGPY   P  D S+SL YT L  NP ST     +GEPS EYFI V 
Sbjct: 204  LSSSTTANGVVFFGDGPYRLLPNIDASQSLIYTPLYINPVSTASAYTQGEPSAEYFIRVK 263

Query: 610  SVTINGKQLPLNSSLLSIGKNGVGGTKLSTVAPYSILETSVYKALTETFIREAVSRNITR 431
            S+ IN K + LN+SLLSI   GVGGTK+STV PY+++ETS+YKA T+ FI  A + NITR
Sbjct: 264  SIRINEKAISLNTSLLSIDSEGVGGTKISTVNPYTVMETSIYKAFTKAFISAAAAINITR 323

Query: 430  VASVAPFGACFSSKSIVSIRGRLQVPSIDLVLQSKSVTWPIYPTNSLVKVSDDVMCLGFI 251
            VA+VAPF  CFSSK++ S R    VPSIDLVLQ++SV W I+  NS+V VSDDV+CLGF+
Sbjct: 324  VAAVAPFNVCFSSKNVYSTRVGPSVPSIDLVLQNESVFWRIFGANSMVYVSDDVLCLGFV 383

Query: 250  DGNSVEDVDNKPRASIVLGGYQLENNFIQFDLATSRVGFTSMPYEFTAGCANF 92
            DG +       PR SIV+GGYQLE+N +QFDLATSR+GF+S        CANF
Sbjct: 384  DGGA------NPRTSIVIGGYQLEDNLLQFDLATSRLGFSSSLLFRRTTCANF 430


>emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera]
          Length = 436

 Score =  476 bits (1224), Expect = e-132
 Identities = 241/413 (58%), Positives = 296/413 (71%)
 Frame = -3

Query: 1330 SFRPSALVLPVTKDVKTLQYVTTITQRTPPVLVKLVVDLGGQFVWIDCQSSYISSSYRPA 1151
            SFRP ALV+PV+KD  TLQY+TTI QRTP V VKLVVDLG QF+W+DC+ +Y+SSSYRPA
Sbjct: 25   SFRPDALVIPVSKDASTLQYLTTINQRTPLVPVKLVVDLGAQFLWVDCEQNYVSSSYRPA 84

Query: 1150 RCGSSQCKIANAHSFCSTCNNIPSPICSNNTCELSPQNGVTEFITGGDVTMDVLSLKSTN 971
            RC S+QC +A A+  C  C + P P C+NNTC + P N VT   T G++  D +S++ST+
Sbjct: 85   RCRSAQCSLARANG-CGDCFSAPRPGCNNNTCGVLPDNTVTRTATSGELAEDFVSVQSTD 143

Query: 970  GYKPGVSVSVPQFIFACTRSFLLEGLAEGTKGIAAFGRTRIALPTQLAAAFSLHRKFAMC 791
            G  PG  VSV +F+F+C  +FLLEGLA    G+A  GRTRIA P+Q A+AFS HRKFA C
Sbjct: 144  GSNPGRVVSVSKFLFSCAPTFLLEGLASSAMGMAGLGRTRIAFPSQFASAFSFHRKFATC 203

Query: 790  LSPSMEAPGAIFFGDGPYSFFPGSDVSKSLTYTKLINNPKSTNGVALRGEPSFEYFIGVT 611
            LS S  A G +FFGDGPY   P  D S+SL YT L  NP ST     +GEPS EYFI V 
Sbjct: 204  LSSSTTANGVVFFGDGPYRLLPNIDASQSLIYTPLYINPVSTASAYTQGEPSAEYFIRVK 263

Query: 610  SVTINGKQLPLNSSLLSIGKNGVGGTKLSTVAPYSILETSVYKALTETFIREAVSRNITR 431
            S+ IN K + LN+SLLSI   GVGGTK+STV PY+++ETS+YK  T+ FI  A + NITR
Sbjct: 264  SIRINEKAISLNTSLLSIDSEGVGGTKISTVNPYTVMETSIYKXFTKAFISAAAAINITR 323

Query: 430  VASVAPFGACFSSKSIVSIRGRLQVPSIDLVLQSKSVTWPIYPTNSLVKVSDDVMCLGFI 251
            VA+VAPF  CFSSK++ S R    VPSIDLVLQ++SV W I+  NS+V VSDDV+CLGF+
Sbjct: 324  VAAVAPFNVCFSSKNVYSTRVGPSVPSIDLVLQNESVFWRIFGANSMVYVSDDVLCLGFV 383

Query: 250  DGNSVEDVDNKPRASIVLGGYQLENNFIQFDLATSRVGFTSMPYEFTAGCANF 92
            DG +       PR SIV+GGYQLE+N +QFDLATSR+GF+S        CANF
Sbjct: 384  DGGA------NPRTSIVIGGYQLEDNLLQFDLATSRLGFSSSLLFRRTTCANF 430


>dbj|BAA03413.1| EDGP precursor [Daucus carota]
          Length = 433

 Score =  471 bits (1211), Expect = e-130
 Identities = 242/421 (57%), Positives = 307/421 (72%), Gaps = 1/421 (0%)
 Frame = -3

Query: 1351 TSCQAQKSFRPSALVLPVTKDVKTLQYVTTITQRTPPVLVKLVVDLGGQFVWIDCQSSYI 1172
            T  QAQ SFRPSALV+PV KD  TLQYVTTI QRTP V   LVVDLGG+F+W+DC  +Y+
Sbjct: 16   TITQAQPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYV 75

Query: 1171 SSSYRPARCGSSQCKIANAHSFCSTCNNIPSPICSNNTCELSPQNGVTEFITGGDVTMDV 992
            SS+YRP RC +SQC ++ + + C  C N P P C+NNTC + P+N V    TGG+V  DV
Sbjct: 76   SSTYRPVRCRTSQCSLSGSIA-CGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDV 134

Query: 991  LSLKSTNGYKPGVSVSVPQFIFACTRSFLLEGLAEGTKGIAAFGRTRIALPTQLAAAFSL 812
            +S++ST+G   G  V+VP+FIF+C  + LL+ LA G  G+A  GRTRIALP+Q A+AFS 
Sbjct: 135  VSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSF 194

Query: 811  HRKFAMCLSPSMEAPGAIFFGDGPYSFFPGSDVS-KSLTYTKLINNPKSTNGVALRGEPS 635
             RKFAMCLS S  +   I FG+ PY+F P   VS K+LTYT L+ NP ST+  + +GEPS
Sbjct: 195  KRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPS 254

Query: 634  FEYFIGVTSVTINGKQLPLNSSLLSIGKNGVGGTKLSTVAPYSILETSVYKALTETFIRE 455
             EYFIGV S+ IN K + LN+SLLSI   G+GGTK+ST+ PY++LETS+YKA+TE FI+E
Sbjct: 255  VEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 314

Query: 454  AVSRNITRVASVAPFGACFSSKSIVSIRGRLQVPSIDLVLQSKSVTWPIYPTNSLVKVSD 275
            + +RNITRVASVAPFGACFS+ +I+S R    VPSIDLVLQS+SV W I  +NS+V ++D
Sbjct: 315  SAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND 374

Query: 274  DVMCLGFIDGNSVEDVDNKPRASIVLGGYQLENNFIQFDLATSRVGFTSMPYEFTAGCAN 95
            +V+CLG +DG S        R SIV+GG+QLE+N +QFDLATSRVGF+         CAN
Sbjct: 375  NVVCLGVVDGGS------NLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCAN 428

Query: 94   F 92
            F
Sbjct: 429  F 429


>ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|222843848|gb|EEE81395.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  468 bits (1203), Expect = e-129
 Identities = 235/417 (56%), Positives = 301/417 (72%), Gaps = 1/417 (0%)
 Frame = -3

Query: 1339 AQKSFRPSALVLPVTKDVKTLQYVTTITQRTPPVLVKLVVDLGGQFVWIDCQSSYISSSY 1160
            AQ+SFRP ALV+PVTKD  TLQYVT I QRTP V + LVVDLGGQF+W+DC  +Y+SS+Y
Sbjct: 23   AQQSFRPKALVVPVTKDSATLQYVTQIKQRTPQVPINLVVDLGGQFLWVDCDKNYVSSTY 82

Query: 1159 RPARCGSSQCKIANAHSFCSTCNNIPSPICSNNTCELSPQNGVTEFITGGDVTMDVLSLK 980
            RPARCGS+ C +A A   C  C + P P C+NNTC + P N VT   TGG++  DV+S+ 
Sbjct: 83   RPARCGSALCSLARAGG-CGDCFSGPRPGCNNNTCGVIPDNTVTRTATGGELATDVVSVN 141

Query: 979  STNGYKPGVSVSVPQFIFACTRSFLLEGLAEGTKGIAAFGRTRIALPTQLAAAFSLHRKF 800
            STNG  PG   SVP+F+F+C  +FLL+GLA G  G+A  GRTRIA P+Q A+AFS +RKF
Sbjct: 142  STNGSNPGREASVPRFLFSCAPTFLLQGLASGVVGMAGLGRTRIAFPSQFASAFSFNRKF 201

Query: 799  AMCLSPSMEAPGAIFFGDGPYSFFPGSDV-SKSLTYTKLINNPKSTNGVALRGEPSFEYF 623
            A+CL+    A G I FGDGPY+F P   + S+SL++T L  NP ST     +GEPS EYF
Sbjct: 202  AICLTSPAPAKGVIIFGDGPYNFLPNIQLTSQSLSFTPLFINPVSTASAFSQGEPSAEYF 261

Query: 622  IGVTSVTINGKQLPLNSSLLSIGKNGVGGTKLSTVAPYSILETSVYKALTETFIREAVSR 443
            IGV S+ I+ K +PLN++LLSI   G GGTK+STV PY++LE+S++ A+T  FI E+ +R
Sbjct: 262  IGVKSIRISDKTVPLNATLLSIDSQGKGGTKISTVNPYTVLESSIFNAVTRAFINESAAR 321

Query: 442  NITRVASVAPFGACFSSKSIVSIRGRLQVPSIDLVLQSKSVTWPIYPTNSLVKVSDDVMC 263
            NITRVASVAPF  CFSS +I S R    VP+I LVLQ+++V W I+  NS+V+VSD+V+C
Sbjct: 322  NITRVASVAPFDVCFSSDNIFSTRLGAAVPTISLVLQNENVIWRIFGANSMVQVSDNVLC 381

Query: 262  LGFIDGNSVEDVDNKPRASIVLGGYQLENNFIQFDLATSRVGFTSMPYEFTAGCANF 92
            LGF++G S       P  SIV+GGYQLE+N  QFDLA SR+GF+S+ +     CANF
Sbjct: 382  LGFVNGGS------NPTTSIVIGGYQLEDNLFQFDLAASRLGFSSLLFGRQTTCANF 432


>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C Chain
            C, Crystal Structure Of Xeg-Edgp
          Length = 413

 Score =  466 bits (1200), Expect = e-129
 Identities = 239/416 (57%), Positives = 304/416 (73%), Gaps = 1/416 (0%)
 Frame = -3

Query: 1336 QKSFRPSALVLPVTKDVKTLQYVTTITQRTPPVLVKLVVDLGGQFVWIDCQSSYISSSYR 1157
            Q SFRPSALV+PV KD  TLQYVTTI QRTP V   LVVDLGG+F+W+DC  +Y+SS+YR
Sbjct: 1    QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYR 60

Query: 1156 PARCGSSQCKIANAHSFCSTCNNIPSPICSNNTCELSPQNGVTEFITGGDVTMDVLSLKS 977
            P RC +SQC ++ + + C  C N P P C+NNTC + P+N V    TGG+V  DV+S++S
Sbjct: 61   PVRCRTSQCSLSGSIA-CGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVES 119

Query: 976  TNGYKPGVSVSVPQFIFACTRSFLLEGLAEGTKGIAAFGRTRIALPTQLAAAFSLHRKFA 797
            T+G   G  V+VP+FIF+C  + LL+ LA G  G+A  GRTRIALP+Q A+AFS  RKFA
Sbjct: 120  TDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFA 179

Query: 796  MCLSPSMEAPGAIFFGDGPYSFFPGSDVS-KSLTYTKLINNPKSTNGVALRGEPSFEYFI 620
            MCLS S  +   I FG+ PY+F P   VS K+LTYT L+ NP ST+  + +GEPS EYFI
Sbjct: 180  MCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFI 239

Query: 619  GVTSVTINGKQLPLNSSLLSIGKNGVGGTKLSTVAPYSILETSVYKALTETFIREAVSRN 440
            GV S+ IN K + LN+SLLSI   G+GGTK+ST+ PY++LETS+YKA+TE FI+E+ +RN
Sbjct: 240  GVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARN 299

Query: 439  ITRVASVAPFGACFSSKSIVSIRGRLQVPSIDLVLQSKSVTWPIYPTNSLVKVSDDVMCL 260
            ITRVASVAPFGACFS+ +I+S R    VPSIDLVLQS+SV W I  +NS+V ++D+V+CL
Sbjct: 300  ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCL 359

Query: 259  GFIDGNSVEDVDNKPRASIVLGGYQLENNFIQFDLATSRVGFTSMPYEFTAGCANF 92
            G +DG S        R SIV+GG+QLE+N +QFDLATSRVGF+         CANF
Sbjct: 360  GVVDGGS------NLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANF 409


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