BLASTX nr result

ID: Coptis24_contig00001781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001781
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532119.1| conserved hypothetical protein [Ricinus comm...   246   8e-63
ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein ...   241   4e-61
emb|CBI20114.3| unnamed protein product [Vitis vinifera]              241   4e-61
ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein ...   239   1e-60
ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60

>ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis]
           gi|223528199|gb|EEF30259.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  246 bits (629), Expect = 8e-63
 Identities = 126/168 (75%), Positives = 140/168 (83%), Gaps = 1/168 (0%)
 Frame = -2

Query: 501 PKML-SFKAHSLPDSSFQTTVISTVFDLIQTSPPTWASSIFSNVLIFTFGSPILVTGLSL 325
           PKML   K    P++      +S   +LIQ++PPTW S++ +NVLIF  GSPIL++GLSL
Sbjct: 39  PKMLPQEKQTQTPNAVSMQGALSGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSL 98

Query: 324 SGIATAFLLGTLTWRAFGPTAFLLVATYFVLGTAVTKVKMAQKEALGVAEKRKGRRGPGS 145
           SGI  AFLLGTLTWRAFGP+ FLLVA YFV+GTA TKVKMAQKEA GVAEKRKGRRGPGS
Sbjct: 99  SGICAAFLLGTLTWRAFGPSGFLLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGS 158

Query: 144 VIGSSAAGCVCAFLSIYGVGGAAFSSLWQLGFVASFCTKLSDTVSSEI 1
           VIGSSAAGCVCAFLSIYGVGG AFS LW+LGFVASFCTKLSDTVSSEI
Sbjct: 159 VIGSSAAGCVCAFLSIYGVGGEAFSRLWELGFVASFCTKLSDTVSSEI 206


>ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis
           vinifera]
          Length = 315

 Score =  241 bits (614), Expect = 4e-61
 Identities = 137/198 (69%), Positives = 149/198 (75%), Gaps = 3/198 (1%)
 Frame = -2

Query: 585 PPFHLHPQNPSFHSLIPSKPKLI-KLHPS-PKM-LSFKAHSLPDSSFQTTVISTVFDLIQ 415
           PP  L      FH    +K  L  ++ P  PKM L+ KA   P   F+  V S    LIQ
Sbjct: 11  PPIPLQ----QFHHTSSTKRLLYPRISPQFPKMPLTAKALPNPVPGFRGAV-SEAIALIQ 65

Query: 414 TSPPTWASSIFSNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPTAFLLVATYFV 235
           +SP TW S++ +N LIF  G+PILV+GLSLSGIA AFLLGTLTWRAFG   FLLVATYFV
Sbjct: 66  SSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTWRAFGSPGFLLVATYFV 125

Query: 234 LGTAVTKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGAAFSSLWQL 55
           +GTA TKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGG AF  LWQL
Sbjct: 126 IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFLQLWQL 185

Query: 54  GFVASFCTKLSDTVSSEI 1
           GFVASFCTKLSDTVSSEI
Sbjct: 186 GFVASFCTKLSDTVSSEI 203


>emb|CBI20114.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  241 bits (614), Expect = 4e-61
 Identities = 137/198 (69%), Positives = 149/198 (75%), Gaps = 3/198 (1%)
 Frame = -2

Query: 585 PPFHLHPQNPSFHSLIPSKPKLI-KLHPS-PKM-LSFKAHSLPDSSFQTTVISTVFDLIQ 415
           PP  L      FH    +K  L  ++ P  PKM L+ KA   P   F+  V S    LIQ
Sbjct: 358 PPIPLQ----QFHHTSSTKRLLYPRISPQFPKMPLTAKALPNPVPGFRGAV-SEAIALIQ 412

Query: 414 TSPPTWASSIFSNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPTAFLLVATYFV 235
           +SP TW S++ +N LIF  G+PILV+GLSLSGIA AFLLGTLTWRAFG   FLLVATYFV
Sbjct: 413 SSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTWRAFGSPGFLLVATYFV 472

Query: 234 LGTAVTKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGAAFSSLWQL 55
           +GTA TKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGG AF  LWQL
Sbjct: 473 IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFLQLWQL 532

Query: 54  GFVASFCTKLSDTVSSEI 1
           GFVASFCTKLSDTVSSEI
Sbjct: 533 GFVASFCTKLSDTVSSEI 550


>ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein sll0875-like [Cucumis
           sativus] gi|449517377|ref|XP_004165722.1| PREDICTED:
           uncharacterized membrane protein sll0875-like [Cucumis
           sativus]
          Length = 313

 Score =  239 bits (610), Expect = 1e-60
 Identities = 130/198 (65%), Positives = 150/198 (75%), Gaps = 2/198 (1%)
 Frame = -2

Query: 588 PPPFHLHPQNPSFHSL-IPSKPKLIKLHPSPKM-LSFKAHSLPDSSFQTTVISTVFDLIQ 415
           P P  L P+   F  L  P KP + K +P+P   +  +A S        T+ S   +L+Q
Sbjct: 10  PFPLLLSPKRHQFPLLPFPLKPLITKSNPNPSSKMVVRAQSFE------TLASGAVNLLQ 63

Query: 414 TSPPTWASSIFSNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPTAFLLVATYFV 235
           ++P TW S++ SN+LIF  GSPILV+GLS SGIA+AFLLGTLTWRAFGP+ FLLVATYFV
Sbjct: 64  SNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVATYFV 123

Query: 234 LGTAVTKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGAAFSSLWQL 55
           +GTA TKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCA L I  VGG AF+ LW+L
Sbjct: 124 IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQLWRL 183

Query: 54  GFVASFCTKLSDTVSSEI 1
           GFVASFCTKLSDTVSSEI
Sbjct: 184 GFVASFCTKLSDTVSSEI 201


>ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  239 bits (610), Expect = 1e-60
 Identities = 119/148 (80%), Positives = 133/148 (89%)
 Frame = -2

Query: 444 VISTVFDLIQTSPPTWASSIFSNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPT 265
           V+S   +LIQ++ PTW S++FSN+LIF  GSPILV+GLSLSGI  A+LLGTLTWRAFG +
Sbjct: 14  VLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAAYLLGTLTWRAFGAS 73

Query: 264 AFLLVATYFVLGTAVTKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVG 85
            FLLVA+YFV+GTAVTKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSI+G G
Sbjct: 74  GFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGTG 133

Query: 84  GAAFSSLWQLGFVASFCTKLSDTVSSEI 1
           G AF +LWQLGFVASFCTKLSDTVSSEI
Sbjct: 134 GRAFIALWQLGFVASFCTKLSDTVSSEI 161


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